BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst028l15
         (615 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001059646.1| Oryza sativa (japonica cultivar-group) Os04g...   252   1e-63
emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...   174   3e-40
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...   174   3e-40
emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,...   174   3e-40
gb|AY108172.1| Zea mays PCO122278 mRNA sequence                        98   5e-17

>ref|NM_001059646.1| Oryza sativa (japonica cultivar-group) Os04g0481500 (Os04g0481500)
           mRNA, complete cds
          Length = 336

 Score =  252 bits (127), Expect = 1e-63
 Identities = 199/223 (89%)
 Strand = Plus / Plus

                                                                       
Query: 102 cggcgacgaggtcatcgacgtcgagctcgttccggagccgtcaaggagaaatcgcagtac 161
           |||||||||||||||||| |||||||  |  |||||| | |||||||| ||||| ||| |
Sbjct: 114 cggcgacgaggtcatcgaggtcgagcctgccccggagacatcaaggaggaatcgtagtgc 173

                                                                       
Query: 162 cactgccaatgcaagtgcacttaaaatgagctgtgaacttctccggttatttgttacaga 221
           ||||||||| || ||||| |||||| |||||||||||||||| ||| ||||||| |||||
Sbjct: 174 cactgccaacgccagtgcgcttaaagtgagctgtgaacttctacggatatttgtcacaga 233

                                                                       
Query: 222 ggctgttcaacgttctgcttttattgctgaagcagagggcactactataattgaacccac 281
           ||||||||||||||||||||||||||| |||||||||||||| || |  |||||||||||
Sbjct: 234 ggctgttcaacgttctgcttttattgccgaagcagagggcacaacaactattgaacccac 293

                                                      
Query: 282 ccatctagaacgtgtattgccacaacttcttttggacttttga 324
           |||||| || |||||||||||||||||||||||||||||||||
Sbjct: 294 ccatctggagcgtgtattgccacaacttcttttggacttttga 336



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                       
Query: 33  cttcgatccggatctgatccacgcaatcttcaatctggtgtggagccggcggaccgagag 92
           ||||||||||||||||||||  || |||||||| ||||||||||||||||||  ||||||
Sbjct: 33  cttcgatccggatctgatccgtgccatcttcaagctggtgtggagccggcggggcgagag 92

                         
Query: 93  gggcggtggcggcg 106
           |||||| |||||||
Sbjct: 93  gggcggcggcggcg 106


>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete
             sequence
          Length = 90767

 Score =  174 bits (88), Expect = 3e-40
 Identities = 112/120 (93%)
 Strand = Plus / Minus

                                                                         
Query: 218   cagaggctgttcaacgttctgcttttattgctgaagcagagggcactactataattgaac 277
             ||||||||||||||||||||||||||||||| |||||||||||||| || |  |||||||
Sbjct: 19678 cagaggctgttcaacgttctgcttttattgccgaagcagagggcacaacaactattgaac 19619

                                                                         
Query: 278   ccacccatctagaacgtgtattgccacaacttcttttggacttttgaggtacctcaggga 337
             |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 19618 ccacccatctggagcgtgtattgccacaacttcttttggacttttgaggtacttcaggga 19559


>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  174 bits (88), Expect = 3e-40
 Identities = 112/120 (93%)
 Strand = Plus / Minus

                                                                            
Query: 218      cagaggctgttcaacgttctgcttttattgctgaagcagagggcactactataattgaac 277
                ||||||||||||||||||||||||||||||| |||||||||||||| || |  |||||||
Sbjct: 24053586 cagaggctgttcaacgttctgcttttattgccgaagcagagggcacaacaactattgaac 24053527

                                                                            
Query: 278      ccacccatctagaacgtgtattgccacaacttcttttggacttttgaggtacctcaggga 337
                |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 24053526 ccacccatctggagcgtgtattgccacaacttcttttggacttttgaggtacttcaggga 24053467


>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score =  174 bits (88), Expect = 3e-40
 Identities = 112/120 (93%)
 Strand = Plus / Minus

                                                                         
Query: 218   cagaggctgttcaacgttctgcttttattgctgaagcagagggcactactataattgaac 277
             ||||||||||||||||||||||||||||||| |||||||||||||| || |  |||||||
Sbjct: 50565 cagaggctgttcaacgttctgcttttattgccgaagcagagggcacaacaactattgaac 50506

                                                                         
Query: 278   ccacccatctagaacgtgtattgccacaacttcttttggacttttgaggtacctcaggga 337
             |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 50505 ccacccatctggagcgtgtattgccacaacttcttttggacttttgaggtacttcaggga 50446


>gb|AY108172.1| Zea mays PCO122278 mRNA sequence
          Length = 456

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 153/187 (81%), Gaps = 1/187 (0%)
 Strand = Plus / Plus

                                                                       
Query: 145 aggagaaatcgcagtaccactgccaatgcaagtgcacttaaaatgagctgtgaacttctc 204
           ||||||||||| || || ||||||||||| | ||| |||||| | ||||| |||||||| 
Sbjct: 215 aggagaaatcggagcacaactgccaatgcgactgctcttaaagtcagctgcgaacttcta 274

                                                                       
Query: 205 cggttatttgttacagaggctgttcaacgttctgcttttattgctgaagcagagggcact 264
           ||| ||||||| ||||||||| ||||||| ||||||||||| |||||| | ||||    |
Sbjct: 275 cggatatttgtaacagaggctattcaacgctctgcttttatcgctgaaacggaggatggt 334

                                                                       
Query: 265 actataattgaacccacccatctagaacgtgt-attgccacaacttcttttggacttttg 323
            || | |||||||||| ||| ||| |||||||  ||||| || || || |||||||| ||
Sbjct: 335 gctgttattgaacccaaccaactanaacgtgtgtttgccgcanctgctcttggacttctg 394

                  
Query: 324 aggtacc 330
           |||||||
Sbjct: 395 aggtacc 401