BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst028i11
         (1032 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001060808.1| Oryza sativa (japonica cultivar-group) Os04g...   254   6e-64
emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...   254   6e-64
emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...   254   6e-64
gb|AY461803.1| Oryza sativa (japonica cultivar-group) Dof28 mRNA...   254   6e-64
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...   254   6e-64

>ref|NM_001060808.1| Oryza sativa (japonica cultivar-group) Os04g0678400 (Os04g0678400)
           mRNA, complete cds
          Length = 1096

 Score =  254 bits (128), Expect = 6e-64
 Identities = 184/202 (91%), Gaps = 3/202 (1%)
 Strand = Plus / Plus

                                                                       
Query: 366 agcagcagcagatcgagtgcccgcggtgcggatccaccaacaccaagttctgctactaca 425
           ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 271 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 330

                                                                       
Query: 426 acaactacagcacgtcgcagccgcgccacttctgccgcgcgtgccgccgctactggacca 485
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  
Sbjct: 331 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 390

                                                                       
Query: 486 aggggggcacgctgcgcgacgtgccggtcgggggcgcctcccgccgcagcggcaac---a 542
           | ||||||||||| |||||||||||||| || |||||||| |||||| |||||  |   |
Sbjct: 391 acgggggcacgctccgcgacgtgccggtgggcggcgcctctcgccgcggcggcggcggca 450

                                 
Query: 543 agcgccgcagggtctccgccga 564
           ||||||||||||||||||||||
Sbjct: 451 agcgccgcagggtctccgccga 472


>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete
             sequence
          Length = 100836

 Score =  254 bits (128), Expect = 6e-64
 Identities = 184/202 (91%), Gaps = 3/202 (1%)
 Strand = Plus / Minus

                                                                         
Query: 366   agcagcagcagatcgagtgcccgcggtgcggatccaccaacaccaagttctgctactaca 425
             ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 89502 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 89443

                                                                         
Query: 426   acaactacagcacgtcgcagccgcgccacttctgccgcgcgtgccgccgctactggacca 485
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  
Sbjct: 89442 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 89383

                                                                         
Query: 486   aggggggcacgctgcgcgacgtgccggtcgggggcgcctcccgccgcagcggcaac---a 542
             | ||||||||||| |||||||||||||| || |||||||| |||||| |||||  |   |
Sbjct: 89382 acgggggcacgctccgcgacgtgccggtgggcggcgcctctcgccgcggcggcggcggca 89323

                                   
Query: 543   agcgccgcagggtctccgccga 564
             ||||||||||||||||||||||
Sbjct: 89322 agcgccgcagggtctccgccga 89301


>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score =  254 bits (128), Expect = 6e-64
 Identities = 184/202 (91%), Gaps = 3/202 (1%)
 Strand = Plus / Minus

                                                                         
Query: 366   agcagcagcagatcgagtgcccgcggtgcggatccaccaacaccaagttctgctactaca 425
             ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 34598 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 34539

                                                                         
Query: 426   acaactacagcacgtcgcagccgcgccacttctgccgcgcgtgccgccgctactggacca 485
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  
Sbjct: 34538 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 34479

                                                                         
Query: 486   aggggggcacgctgcgcgacgtgccggtcgggggcgcctcccgccgcagcggcaac---a 542
             | ||||||||||| |||||||||||||| || |||||||| |||||| |||||  |   |
Sbjct: 34478 acgggggcacgctccgcgacgtgccggtgggcggcgcctctcgccgcggcggcggcggca 34419

                                   
Query: 543   agcgccgcagggtctccgccga 564
             ||||||||||||||||||||||
Sbjct: 34418 agcgccgcagggtctccgccga 34397


>gb|AY461803.1| Oryza sativa (japonica cultivar-group) Dof28 mRNA, complete cds
          Length = 879

 Score =  254 bits (128), Expect = 6e-64
 Identities = 184/202 (91%), Gaps = 3/202 (1%)
 Strand = Plus / Plus

                                                                       
Query: 366 agcagcagcagatcgagtgcccgcggtgcggatccaccaacaccaagttctgctactaca 425
           ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 161 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 220

                                                                       
Query: 426 acaactacagcacgtcgcagccgcgccacttctgccgcgcgtgccgccgctactggacca 485
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  
Sbjct: 221 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 280

                                                                       
Query: 486 aggggggcacgctgcgcgacgtgccggtcgggggcgcctcccgccgcagcggcaac---a 542
           | ||||||||||| |||||||||||||| || |||||||| |||||| |||||  |   |
Sbjct: 281 acgggggcacgctccgcgacgtgccggtgggcggcgcctctcgccgcggcggcggcggca 340

                                 
Query: 543 agcgccgcagggtctccgccga 564
           ||||||||||||||||||||||
Sbjct: 341 agcgccgcagggtctccgccga 362


>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  254 bits (128), Expect = 6e-64
 Identities = 184/202 (91%), Gaps = 3/202 (1%)
 Strand = Plus / Minus

                                                                            
Query: 366      agcagcagcagatcgagtgcccgcggtgcggatccaccaacaccaagttctgctactaca 425
                ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 34691274 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 34691215

                                                                            
Query: 426      acaactacagcacgtcgcagccgcgccacttctgccgcgcgtgccgccgctactggacca 485
                |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  
Sbjct: 34691214 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 34691155

                                                                            
Query: 486      aggggggcacgctgcgcgacgtgccggtcgggggcgcctcccgccgcagcggcaac---a 542
                | ||||||||||| |||||||||||||| || |||||||| |||||| |||||  |   |
Sbjct: 34691154 acgggggcacgctccgcgacgtgccggtgggcggcgcctctcgccgcggcggcggcggca 34691095

                                      
Query: 543      agcgccgcagggtctccgccga 564
                ||||||||||||||||||||||
Sbjct: 34691094 agcgccgcagggtctccgccga 34691073



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 114/139 (82%)
 Strand = Plus / Minus

                                                                            
Query: 383      tgcccgcggtgcggatccaccaacaccaagttctgctactacaacaactacagcacgtcg 442
                ||||||||||||   || || |||||||||||||||||||||||||||||||||     |
Sbjct: 28509422 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 28509363

                                                                            
Query: 443      cagccgcgccacttctgccgcgcgtgccgccgctactggaccaaggggggcacgctgcgc 502
                ||||||||| ||||||||    ||||||| |||||||||||  |||| ||| |||| |||
Sbjct: 28509362 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggctcgctccgc 28509303

                                   
Query: 503      gacgtgccggtcgggggcg 521
                 |||| || ||||| ||||
Sbjct: 28509302 aacgtccccgtcggcggcg 28509284