BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst028h17
         (490 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...   123   7e-25
dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic D...   123   7e-25
dbj|AK242001.1| Oryza sativa (japonica cultivar-group) cDNA, clo...   119   1e-23
ref|NM_001056590.1| Oryza sativa (japonica cultivar-group) Os03g...    98   4e-17
gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str...    98   4e-17

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  123 bits (62), Expect = 7e-25
 Identities = 118/136 (86%), Gaps = 3/136 (2%)
 Strand = Plus / Minus

                                                                            
Query: 91       taccgtcgggaaggagttctgtttgagtgcgtc---ttccgcgcatgcgatctcctcctt 147
                |||||| |||| |||||||||| |||||||  |   ||| ||||||||||||||||  ||
Sbjct: 28596934 taccgtggggatggagttctgtctgagtgctgcagcttctgcgcatgcgatctccttgtt 28596875

                                                                            
Query: 148      gagcctgacgaccttctgcttcagctccttgatgtactctgacgcgtccatgattatggc 207
                ||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||| 
Sbjct: 28596874 gagcctgacaaccttctgctttagctccttgatgtactctgacgcgtccgtgattatgga 28596815

                                
Query: 208      agtattgcttagctgt 223
                 || ||||| ||||||
Sbjct: 28596814 ggtgttgctgagctgt 28596799


>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1167_G06
          Length = 112386

 Score =  123 bits (62), Expect = 7e-25
 Identities = 118/136 (86%), Gaps = 3/136 (2%)
 Strand = Plus / Minus

                                                                         
Query: 91    taccgtcgggaaggagttctgtttgagtgcgtc---ttccgcgcatgcgatctcctcctt 147
             |||||| |||| |||||||||| |||||||  |   ||| ||||||||||||||||  ||
Sbjct: 62892 taccgtggggatggagttctgtctgagtgctgcagcttctgcgcatgcgatctccttgtt 62833

                                                                         
Query: 148   gagcctgacgaccttctgcttcagctccttgatgtactctgacgcgtccatgattatggc 207
             ||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||| 
Sbjct: 62832 gagcctgacaaccttctgctttagctccttgatgtactctgacgcgtccgtgattatgga 62773

                             
Query: 208   agtattgcttagctgt 223
              || ||||| ||||||
Sbjct: 62772 ggtgttgctgagctgt 62757


>dbj|AK242001.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075101F12,
           full insert sequence
          Length = 955

 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                       
Query: 123 cttccgcgcatgcgatctcctccttgagcctgacgaccttctgcttcagctccttgatgt 182
           |||| ||||||||||||||||  ||||||||||| ||||||||||| |||||||||||||
Sbjct: 302 cttctgcgcatgcgatctccttgttgagcctgacaaccttctgctttagctccttgatgt 243

                                   
Query: 183 actctgacgcgtccatgattatgg 206
           |||||||||||||| |||||||||
Sbjct: 242 actctgacgcgtccgtgattatgg 219


>ref|NM_001056590.1| Oryza sativa (japonica cultivar-group) Os03g0338400 (Os03g0338400)
           mRNA, complete cds
          Length = 1142

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                       
Query: 114 tgagtgcgtcttccgcgcatgcgatctcctccttgagcctgacgaccttctgcttcagct 173
           |||| ||||||| |||||| ||||||||||  || ||||| |||||||||||||||||||
Sbjct: 469 tgagagcgtcttgcgcgcaagcgatctcctggttcagcctcacgaccttctgcttcagct 410

                                    
Query: 174 ccttgatgtactctgacgcgtccat 198
           ||||||||||||  |||||||||||
Sbjct: 409 ccttgatgtacttggacgcgtccat 385


>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                         
Query: 114   tgagtgcgtcttccgcgcatgcgatctcctccttgagcctgacgaccttctgcttcagct 173
             |||| ||||||| |||||| ||||||||||  || ||||| |||||||||||||||||||
Sbjct: 25094 tgagagcgtcttgcgcgcaagcgatctcctggttcagcctcacgaccttctgcttcagct 25153

                                      
Query: 174   ccttgatgtactctgacgcgtccat 198
             ||||||||||||  |||||||||||
Sbjct: 25154 ccttgatgtacttggacgcgtccat 25178