BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst028f22 (683 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001065959.1| Oryza sativa (japonica cultivar-group) Os07g... 452 e-124 dbj|AB110202.1| Oryza sativa (japonica cultivar-group) mRNA for ... 452 e-124 dbj|AK102570.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124 emb|CT831983.1| Oryza sativa (indica cultivar-group) cDNA clone:... 444 e-121 dbj|AK073463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 428 e-116 >ref|NM_001065959.1| Oryza sativa (japonica cultivar-group) Os07g0301200 (Os07g0301200) mRNA, complete cds Length = 1942 Score = 452 bits (228), Expect = e-124 Identities = 339/376 (90%) Strand = Plus / Plus Query: 1 ttaaagaagggaaatgccctttaatgattggtacagatgtagcttcacgcggacttgata 60 ||||||||||| ||| ||||| ||||||| || ||||| || || || |||||||||| Sbjct: 1312 ttaaagaagggtcatgtcctttgatgattgccactgatgtcgcatcccgtggacttgata 1371 Query: 61 ttcctgatgttgaagttgtcattaattatagttatcctttgaccacggaggattacgtcc 120 |||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 1372 ttccagatgtcgaagttgtcattaactatagctatcctttgactacagaggattatgtcc 1431 Query: 121 acaggattggaaggactggtcgtgctggcaagaaaggtgttgcgcataccttcttcacac 180 |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1432 acaggattgggaggaccggtcgtgctggcaagaaaggtgttgcacataccttcttcactc 1491 Query: 181 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggttg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1492 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggtcg 1551 Query: 241 ttcctccagcccttatgaaatttggcacgcatgtcaagaaaaaggaatcgaaaatctatg 300 ||||||| || |||| ||||||||||| || |||||||||||||||||| |||| |||| Sbjct: 1552 ttcctcctgcacttacaaaatttggcacacacgtcaagaaaaaggaatcgcaaatatatg 1611 Query: 301 gatcccacttcaaggaaatcacagcagatgctcctaaatccacaaagatcacgtttggtg 360 |||| || ||||| ||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 1612 gatctcatttcaaagaaatcaaagcagatgctcctaaatcaacaaagattacgtttggtg 1671 Query: 361 attctgatgaggacta 376 |||||||||||||||| Sbjct: 1672 attctgatgaggacta 1687 >dbj|AB110202.1| Oryza sativa (japonica cultivar-group) mRNA for RNA helicase, partial cds, clone: pNS-FP40 Length = 1494 Score = 452 bits (228), Expect = e-124 Identities = 339/376 (90%) Strand = Plus / Plus Query: 1 ttaaagaagggaaatgccctttaatgattggtacagatgtagcttcacgcggacttgata 60 ||||||||||| ||| ||||| ||||||| || ||||| || || || |||||||||| Sbjct: 853 ttaaagaagggtcatgtcctttgatgattgccactgatgtcgcatcccgtggacttgata 912 Query: 61 ttcctgatgttgaagttgtcattaattatagttatcctttgaccacggaggattacgtcc 120 |||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 913 ttccagatgtcgaagttgtcattaactatagctatcctttgactacagaggattatgtcc 972 Query: 121 acaggattggaaggactggtcgtgctggcaagaaaggtgttgcgcataccttcttcacac 180 |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 973 acaggattgggaggaccggtcgtgctggcaagaaaggtgttgcacataccttcttcactc 1032 Query: 181 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggttg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1033 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggtcg 1092 Query: 241 ttcctccagcccttatgaaatttggcacgcatgtcaagaaaaaggaatcgaaaatctatg 300 ||||||| || |||| ||||||||||| || |||||||||||||||||| |||| |||| Sbjct: 1093 ttcctcctgcacttacaaaatttggcacacacgtcaagaaaaaggaatcgcaaatatatg 1152 Query: 301 gatcccacttcaaggaaatcacagcagatgctcctaaatccacaaagatcacgtttggtg 360 |||| || ||||| ||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 1153 gatctcatttcaaagaaatcaaagcagatgctcctaaatcaacaaagattacgtttggtg 1212 Query: 361 attctgatgaggacta 376 |||||||||||||||| Sbjct: 1213 attctgatgaggacta 1228 >dbj|AK102570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097L21, full insert sequence Length = 2251 Score = 452 bits (228), Expect = e-124 Identities = 339/376 (90%) Strand = Plus / Plus Query: 1 ttaaagaagggaaatgccctttaatgattggtacagatgtagcttcacgcggacttgata 60 ||||||||||| ||| ||||| ||||||| || ||||| || || || |||||||||| Sbjct: 1610 ttaaagaagggtcatgtcctttgatgattgccactgatgtcgcatcccgtggacttgata 1669 Query: 61 ttcctgatgttgaagttgtcattaattatagttatcctttgaccacggaggattacgtcc 120 |||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 1670 ttccagatgtcgaagttgtcattaactatagctatcctttgactacagaggattatgtcc 1729 Query: 121 acaggattggaaggactggtcgtgctggcaagaaaggtgttgcgcataccttcttcacac 180 |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1730 acaggattgggaggaccggtcgtgctggcaagaaaggtgttgcacataccttcttcactc 1789 Query: 181 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggttg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1790 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggtcg 1849 Query: 241 ttcctccagcccttatgaaatttggcacgcatgtcaagaaaaaggaatcgaaaatctatg 300 ||||||| || |||| ||||||||||| || |||||||||||||||||| |||| |||| Sbjct: 1850 ttcctcctgcacttacaaaatttggcacacacgtcaagaaaaaggaatcgcaaatatatg 1909 Query: 301 gatcccacttcaaggaaatcacagcagatgctcctaaatccacaaagatcacgtttggtg 360 |||| || ||||| ||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 1910 gatctcatttcaaagaaatcaaagcagatgctcctaaatcaacaaagattacgtttggtg 1969 Query: 361 attctgatgaggacta 376 |||||||||||||||| Sbjct: 1970 attctgatgaggacta 1985 >emb|CT831983.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121E03, full insert sequence Length = 1946 Score = 444 bits (224), Expect = e-121 Identities = 338/376 (89%) Strand = Plus / Plus Query: 1 ttaaagaagggaaatgccctttaatgattggtacagatgtagcttcacgcggacttgata 60 ||||||||||| ||| ||||| ||||||| || ||||| || || || |||||||||| Sbjct: 1302 ttaaagaagggtcatgtcctttgatgattgccactgatgtcgcatcccgtggacttgata 1361 Query: 61 ttcctgatgttgaagttgtcattaattatagttatcctttgaccacggaggattacgtcc 120 |||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 1362 ttccagatgtcgaagttgtcattaactatagctatcctttgactacagaggattatgtcc 1421 Query: 121 acaggattggaaggactggtcgtgctggcaagaaaggtgttgcgcataccttcttcacac 180 |||||||||| || || |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1422 acaggattgggagtaccggtcgtgctggcaagaaaggtgttgcacataccttcttcactc 1481 Query: 181 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggttg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1482 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggtcg 1541 Query: 241 ttcctccagcccttatgaaatttggcacgcatgtcaagaaaaaggaatcgaaaatctatg 300 ||||||| || |||| ||||||||||| || |||||||||||||||||| |||| |||| Sbjct: 1542 ttcctcctgcacttacaaaatttggcacacacgtcaagaaaaaggaatcgcaaatatatg 1601 Query: 301 gatcccacttcaaggaaatcacagcagatgctcctaaatccacaaagatcacgtttggtg 360 |||| || ||||| ||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 1602 gatctcatttcaaagaaatcaaagcagatgctcctaaatcaacaaagattacgtttggtg 1661 Query: 361 attctgatgaggacta 376 |||||||||||||||| Sbjct: 1662 attctgatgaggacta 1677 >dbj|AK073463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041I11, full insert sequence Length = 1942 Score = 428 bits (216), Expect = e-116 Identities = 337/376 (89%), Gaps = 1/376 (0%) Strand = Plus / Plus Query: 1 ttaaagaagggaaatgccctttaatgattggtacagatgtagcttcacgcggacttgata 60 ||||||||||| ||| ||||| ||||||| || ||||| || || || |||||||||| Sbjct: 1313 ttaaagaagggtcatgtcctttgatgattgccactgatgtcgcatcccgtggacttgata 1372 Query: 61 ttcctgatgttgaagttgtcattaattatagttatcctttgaccacggaggattacgtcc 120 |||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 1373 ttccagatgtcgaagttgtcattaactatagctatcctttgactacagaggattatgtcc 1432 Query: 121 acaggattggaaggactggtcgtgctggcaagaaaggtgttgcgcataccttcttcacac 180 |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1433 acaggattgggaggaccggtcgtgctggcaagaaaggtgttgcacataccttcttcactc 1492 Query: 181 aagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggttg 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 1493 aagagaacaagggacttgc-ggtgaacttgtcaatgttttgcgggaggctggtcaggtcg 1551 Query: 241 ttcctccagcccttatgaaatttggcacgcatgtcaagaaaaaggaatcgaaaatctatg 300 ||||||| || |||| ||||||||||| || |||||||||||||||||| |||| |||| Sbjct: 1552 ttcctcctgcacttacaaaatttggcacacacgtcaagaaaaaggaatcgcaaatatatg 1611 Query: 301 gatcccacttcaaggaaatcacagcagatgctcctaaatccacaaagatcacgtttggtg 360 |||| | ||||| ||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 1612 gatctcgtttcaaagaaatcaaagcagatgctcctaaatcaacaaagattacgtttggtg 1671 Query: 361 attctgatgaggacta 376 |||||||||||||||| Sbjct: 1672 attctgatgaggacta 1687