BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst028f08
         (572 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001055678.1| Oryza sativa (japonica cultivar-group) Os03g...   311   2e-81
dbj|AK071368.1| Oryza sativa (japonica cultivar-group) cDNA clon...   311   2e-81
gb|AY104441.1| Zea mays PCO109208 mRNA sequence                       174   2e-40
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   149   1e-32
gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str...   149   1e-32

>ref|NM_001055678.1| Oryza sativa (japonica cultivar-group) Os03g0177000 (Os03g0177000)
            mRNA, complete cds
          Length = 1374

 Score =  311 bits (157), Expect = 2e-81
 Identities = 244/273 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtagaatctatcagccagatcagccgaaatttggatatttgacaaatgtatgtgttgcta 60
            ||||||| || |||||||||||||| || ||||| ||| |||||||||| ||||||||||
Sbjct: 778  gtagaatataccagccagatcagccaaagtttgggtatctgacaaatgtttgtgttgcta 837

                                                                        
Query: 61   agtatgcacggcgtcaagggattgccagcaacatgttgctgttggccattgatgctgcaa 120
            | |||||||||||||||||||| |||||||| |||||| |  ||||||| ||||||||||
Sbjct: 838  aatatgcacggcgtcaagggatcgccagcaatatgttgttactggccatagatgctgcaa 897

                                                                        
Query: 121  gactcaatggtgctgaaaatatttatattcatgtacataaggataacttaccagctcgga 180
            ||||||||||||||||| |  ||||||||||||| |||||||||||  ||||||||||||
Sbjct: 898  gactcaatggtgctgaagaagtttatattcatgtgcataaggataatctaccagctcgga 957

                                                                        
Query: 181  ggctctatgatcagataggattcaagatggttgacatggattgccctcgtcagtcatcag 240
            |||||||||||||||||||||||| |||||||||| | ||| |  |||||||||| ||||
Sbjct: 958  ggctctatgatcagataggattcaggatggttgacttcgatggtgctcgtcagtcgtcag 1017

                                             
Query: 241  atctgtgcttactctccttcggttcctaggact 273
            |||| ||||||||||||||| ||||||||||||
Sbjct: 1018 atctatgcttactctccttcagttcctaggact 1050


>dbj|AK071368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092E16, full
            insert sequence
          Length = 1374

 Score =  311 bits (157), Expect = 2e-81
 Identities = 244/273 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gtagaatctatcagccagatcagccgaaatttggatatttgacaaatgtatgtgttgcta 60
            ||||||| || |||||||||||||| || ||||| ||| |||||||||| ||||||||||
Sbjct: 778  gtagaatataccagccagatcagccaaagtttgggtatctgacaaatgtttgtgttgcta 837

                                                                        
Query: 61   agtatgcacggcgtcaagggattgccagcaacatgttgctgttggccattgatgctgcaa 120
            | |||||||||||||||||||| |||||||| |||||| |  ||||||| ||||||||||
Sbjct: 838  aatatgcacggcgtcaagggatcgccagcaatatgttgttactggccatagatgctgcaa 897

                                                                        
Query: 121  gactcaatggtgctgaaaatatttatattcatgtacataaggataacttaccagctcgga 180
            ||||||||||||||||| |  ||||||||||||| |||||||||||  ||||||||||||
Sbjct: 898  gactcaatggtgctgaagaagtttatattcatgtgcataaggataatctaccagctcgga 957

                                                                        
Query: 181  ggctctatgatcagataggattcaagatggttgacatggattgccctcgtcagtcatcag 240
            |||||||||||||||||||||||| |||||||||| | ||| |  |||||||||| ||||
Sbjct: 958  ggctctatgatcagataggattcaggatggttgacttcgatggtgctcgtcagtcgtcag 1017

                                             
Query: 241  atctgtgcttactctccttcggttcctaggact 273
            |||| ||||||||||||||| ||||||||||||
Sbjct: 1018 atctatgcttactctccttcagttcctaggact 1050


>gb|AY104441.1| Zea mays PCO109208 mRNA sequence
          Length = 614

 Score =  174 bits (88), Expect = 2e-40
 Identities = 145/164 (88%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaatctatcagccagatcagccgaaatttggatatttgacaaatgtatgtgttgctaagt 63
           |||| |||||||| |||||||| |||||||| ||| | |||||||||||||||||||| |
Sbjct: 451 gaatttatcagcctgatcagccaaaatttgggtatgtaacaaatgtatgtgttgctaaat 510

                                                                       
Query: 64  atgcacggcgtcaagggattgccagcaacatgttgctgttggccattgatgctgcaagac 123
           ||||| |||||||||||||||| ||||||||| || | |||||||| |||||||||| ||
Sbjct: 511 atgcaaggcgtcaagggattgctagcaacatgctgttattggccatagatgctgcaaaac 570

                                                       
Query: 124 tcaatggtgctgaaaatatttatattcatgtacataaggataac 167
           | || ||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 571 ttaacggtgctgaaaatatttacattcatgtgcataaagataac 614


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  149 bits (75), Expect = 1e-32
 Identities = 117/131 (89%)
 Strand = Plus / Plus

                                                                           
Query: 1       gtagaatctatcagccagatcagccgaaatttggatatttgacaaatgtatgtgttgcta 60
               ||||||| || |||||||||||||| || ||||| ||| |||||||||| ||||||||||
Sbjct: 4066025 gtagaatataccagccagatcagccaaagtttgggtatctgacaaatgtttgtgttgcta 4066084

                                                                           
Query: 61      agtatgcacggcgtcaagggattgccagcaacatgttgctgttggccattgatgctgcaa 120
               | |||||||||||||||||||| |||||||| |||||| |  ||||||| ||||||||||
Sbjct: 4066085 aatatgcacggcgtcaagggatcgccagcaatatgttgttactggccatagatgctgcaa 4066144

                          
Query: 121     gactcaatggt 131
               |||||||||||
Sbjct: 4066145 gactcaatggt 4066155



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                           
Query: 129     ggtgctgaaaatatttatattcatgtacataaggataacttaccagctcggaggctctat 188
               ||||||||| |  ||||||||||||| |||||||||||  ||||||||||||||||||||
Sbjct: 4066266 ggtgctgaagaagtttatattcatgtgcataaggataatctaccagctcggaggctctat 4066325

                               
Query: 189     gatcagataggattca 204
               ||||||||||||||||
Sbjct: 4066326 gatcagataggattca 4066341


>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score =  149 bits (75), Expect = 1e-32
 Identities = 117/131 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     gtagaatctatcagccagatcagccgaaatttggatatttgacaaatgtatgtgttgcta 60
             ||||||| || |||||||||||||| || ||||| ||| |||||||||| ||||||||||
Sbjct: 33454 gtagaatataccagccagatcagccaaagtttgggtatctgacaaatgtttgtgttgcta 33395

                                                                         
Query: 61    agtatgcacggcgtcaagggattgccagcaacatgttgctgttggccattgatgctgcaa 120
             | |||||||||||||||||||| |||||||| |||||| |  ||||||| ||||||||||
Sbjct: 33394 aatatgcacggcgtcaagggatcgccagcaatatgttgttactggccatagatgctgcaa 33335

                        
Query: 121   gactcaatggt 131
             |||||||||||
Sbjct: 33334 gactcaatggt 33324



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                         
Query: 129   ggtgctgaaaatatttatattcatgtacataaggataacttaccagctcggaggctctat 188
             ||||||||| |  ||||||||||||| |||||||||||  ||||||||||||||||||||
Sbjct: 33213 ggtgctgaagaagtttatattcatgtgcataaggataatctaccagctcggaggctctat 33154

                             
Query: 189   gatcagataggattca 204
             ||||||||||||||||
Sbjct: 33153 gatcagataggattca 33138