BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst028f01 (891 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK243479.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 357 5e-95 gb|AY105253.1| Zea mays PCO131351 mRNA sequence 357 5e-95 emb|CT830543.1| Oryza sativa (indica cultivar-group) cDNA clone:... 341 3e-90 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 274 6e-70 emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003... 274 6e-70 >dbj|AK243479.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100072M24, full insert sequence Length = 1146 Score = 357 bits (180), Expect = 5e-95 Identities = 319/364 (87%), Gaps = 6/364 (1%) Strand = Plus / Plus Query: 94 actgcagtatggcggcaagacgcaatgttcga---tattctgctcttcctacagataata 150 |||||| ||||||| | |||||||||||||| ||| || | ||||||||||| | | Sbjct: 277 actgcactatggcgtctagacgcaatgttcgggggtatgctccccttcctacagaggaca 336 Query: 151 gggatgacagcaaccttactgaagacaatgttgaccttcgatttgcttacactccaaaat 210 ||||||||||||| |||||||| || |||||||||||| || ||||||| ||||||| Sbjct: 337 gggatgacagcaatcttactgatga---tgttgaccttcggttcacttacaccccaaaat 393 Query: 211 ccttcaggaagatcccgtggaagtcaattgccctagcattgttcctcctcctcctaggaa 270 || ||||||| ||||||||||||||||||||||| ||| | |||||||||||||||||| Sbjct: 394 ccctcaggaaaatcccgtggaagtcaattgccctggcactattcctcctcctcctaggat 453 Query: 271 gttctcttctcgtcctttcatatttcatattcacaggtcacatggagggtgatagctctc 330 |||| |||||| |||| |||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 454 gttcgcttctcttcctgtcatattttatattcacaggtcacatggagggggataactctc 513 Query: 331 aagcatatggtctcttgttcctgggcgtccttgcctttcttcctggtttttatgagactc 390 | |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 514 aggcatatggtctcttgttcctgggcatccttgccttccttcctggtttttatgagactc 573 Query: 391 gagttgcttattattcatggagaggagcaccagggtacactttcgcatccatcccagatt 450 |||||||||| ||||| | |||||||||||||||||| || || ||||| || ||||||| Sbjct: 574 gagttgcttactattcctcgagaggagcaccagggtatacctttgcatctattccagatt 633 Query: 451 atta 454 |||| Sbjct: 634 atta 637 >gb|AY105253.1| Zea mays PCO131351 mRNA sequence Length = 808 Score = 357 bits (180), Expect = 5e-95 Identities = 321/368 (87%) Strand = Plus / Plus Query: 99 agtatggcggcaagacgcaatgttcgatattctgctcttcctacagataatagggatgac 158 |||||||||||||||||||||||||| || || |||||||| |||| | |||||| | Sbjct: 270 agtatggcggcaagacgcaatgttcggtactcgcctcttccttcagaggacggggatggc 329 Query: 159 agcaaccttactgaagacaatgttgaccttcgatttgcttacactccaaaatccttcagg 218 ||||| ||| | |||| || ||||||| |||| |||||||||||||||| | ||| Sbjct: 330 agcaattttattaaagaagatattgacctccgatacacttacactccaaaatcgtacaga 389 Query: 219 aagatcccgtggaagtcaattgccctagcattgttcctcctcctcctaggaagttctctt 278 | |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||| Sbjct: 390 aggatcccatggaagtcaattgccctggcattgttcctcctcctcctaggaacttcactt 449 Query: 279 ctcgtcctttcatatttcatattcacaggtcacatggagggtgatagctctcaagcatat 338 ||| | ||||| || |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 450 ctctttctttcttacttcatattcacaggtcacatggagggtgatagttctcaggcatat 509 Query: 339 ggtctcttgttcctgggcgtccttgcctttcttcctggtttttatgagactcgagttgct 398 ||||||||||||||||| ||||| |||||||||||||||| || ||||||||||||||| Sbjct: 510 ggtctcttgttcctgggtttcctttcctttcttcctggtttctacgagactcgagttgct 569 Query: 399 tattattcatggagaggagcaccagggtacactttcgcatccatcccagattattaggct 458 || ||||||||| | |||||||||||||||||||| |||||||| |||||||||||| || Sbjct: 570 tactattcatggcggggagcaccagggtacacttttgcatccataccagattattagcct 629 Query: 459 ttgagttt 466 || ||||| Sbjct: 630 ttcagttt 637 >emb|CT830543.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA009K01, full insert sequence Length = 992 Score = 341 bits (172), Expect = 3e-90 Identities = 285/322 (88%), Gaps = 3/322 (0%) Strand = Plus / Plus Query: 133 ctcttcctacagataatagggatgacagcaaccttactgaagacaatgttgaccttcgat 192 ||||||||||||| | ||||||||||||||||||||||| || ||| |||||||| | Sbjct: 264 ctcttcctacagaggacagggatgacagcaaccttactgatga---tgtagaccttcggt 320 Query: 193 ttgcttacactccaaaatccttcaggaagatcccgtggaagtcaattgccctagcattgt 252 | ||||||| ||||||||| |||| || ||||||||||||||||||||||| ||| | | Sbjct: 321 tcacttacaccccaaaatccctcagaaaaatcccgtggaagtcaattgccctggcactat 380 Query: 253 tcctcctcctcctaggaagttctcttctcgtcctttcatatttcatattcacaggtcaca 312 ||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 381 tcctcctcctcctaggatgttctcttctcttcctgtcatattttatattcacaggtcaca 440 Query: 313 tggagggtgatagctctcaagcatatggtctcttgttcctgggcgtccttgcctttcttc 372 ||||||| |||| |||||| | |||||||||||||||||||||| |||||||||| |||| Sbjct: 441 tggagggggataactctcaggtatatggtctcttgttcctgggcatccttgccttccttc 500 Query: 373 ctggtttttatgagactcgagttgcttattattcatggagaggagcaccagggtacactt 432 |||||||||||||||||||||||||||| ||||| | |||||| |||||||| ||||| | Sbjct: 501 ctggtttttatgagactcgagttgcttactattcctcgagaggggcaccaggatacacct 560 Query: 433 tcgcatccatcccagattatta 454 | ||||| || ||||||||||| Sbjct: 561 ttgcatctattccagattatta 582 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 274 bits (138), Expect = 6e-70 Identities = 256/294 (87%), Gaps = 6/294 (2%) Strand = Plus / Minus Query: 87 tgcagatactgcagtatggcggcaagacgcaatgttcga---tattctgctcttcctaca 143 |||||| |||||| ||||||| | |||||||||||||| ||| || | ||||||||| Sbjct: 1387820 tgcagacactgcactatggcgtctagacgcaatgttcgggggtatgctccccttcctaca 1387761 Query: 144 gataatagggatgacagcaaccttactgaagacaatgttgaccttcgatttgcttacact 203 || | |||||||||||||| |||||||| || |||||||||||| || ||||||| Sbjct: 1387760 gaggacagggatgacagcaatcttactgatga---tgttgaccttcggttcacttacacc 1387704 Query: 204 ccaaaatccttcaggaagatcccgtggaagtcaattgccctagcattgttcctcctcctc 263 ||||||||| ||||||| ||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 1387703 ccaaaatccctcaggaaaatcccgtggaagtcaattgccctggcactattcctcctcctc 1387644 Query: 264 ctaggaagttctcttctcgtcctttcatatttcatattcacaggtcacatggagggtgat 323 |||||| |||| |||||| |||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 1387643 ctaggatgttcgcttctcttcctgtcatattttatattcacaggtcacatggagggggat 1387584 Query: 324 agctctcaagcatatggtctcttgttcctgggcgtccttgcctttcttcctggt 377 | |||||| |||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 1387583 aactctcaggcatatggtctcttgttcctgggcatccttgccttccttcctggt 1387530 Score = 95.6 bits (48), Expect = 3e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 375 ggtttttatgagactcgagttgcttattattcatggagaggagcaccagggtacactttc 434 |||||||||||||||||||||||||| ||||| | |||||||||||||||||| || || Sbjct: 1387138 ggtttttatgagactcgagttgcttactattcctcgagaggagcaccagggtataccttt 1387079 Query: 435 gcatccatcccagattatta 454 ||||| || ||||||||||| Sbjct: 1387078 gcatctattccagattatta 1387059 >emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 274 bits (138), Expect = 6e-70 Identities = 256/294 (87%), Gaps = 6/294 (2%) Strand = Plus / Plus Query: 87 tgcagatactgcagtatggcggcaagacgcaatgttcga---tattctgctcttcctaca 143 |||||| |||||| ||||||| | |||||||||||||| ||| || | ||||||||| Sbjct: 41349 tgcagacactgcactatggcgtctagacgcaatgttcgggggtatgctccccttcctaca 41408 Query: 144 gataatagggatgacagcaaccttactgaagacaatgttgaccttcgatttgcttacact 203 || | |||||||||||||| |||||||| || |||||||||||| || ||||||| Sbjct: 41409 gaggacagggatgacagcaatcttactgatga---tgttgaccttcggttcacttacacc 41465 Query: 204 ccaaaatccttcaggaagatcccgtggaagtcaattgccctagcattgttcctcctcctc 263 ||||||||| ||||||| ||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 41466 ccaaaatccctcaggaaaatcccgtggaagtcaattgccctggcactattcctcctcctc 41525 Query: 264 ctaggaagttctcttctcgtcctttcatatttcatattcacaggtcacatggagggtgat 323 |||||| |||| |||||| |||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 41526 ctaggatgttcgcttctcttcctgtcatattttatattcacaggtcacatggagggggat 41585 Query: 324 agctctcaagcatatggtctcttgttcctgggcgtccttgcctttcttcctggt 377 | |||||| |||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 41586 aactctcaggcatatggtctcttgttcctgggcatccttgccttccttcctggt 41639 Score = 95.6 bits (48), Expect = 3e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 375 ggtttttatgagactcgagttgcttattattcatggagaggagcaccagggtacactttc 434 |||||||||||||||||||||||||| ||||| | |||||||||||||||||| || || Sbjct: 42031 ggtttttatgagactcgagttgcttactattcctcgagaggagcaccagggtataccttt 42090 Query: 435 gcatccatcccagattatta 454 ||||| || ||||||||||| Sbjct: 42091 gcatctattccagattatta 42110