BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst028d02
         (611 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001059531.1| Oryza sativa (japonica cultivar-group) Os04g...   184   3e-43
dbj|AK066992.1| Oryza sativa (japonica cultivar-group) cDNA clon...   184   3e-43
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...   109   1e-20
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D...   109   1e-20
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...   103   8e-19

>ref|NM_001059531.1| Oryza sativa (japonica cultivar-group) Os04g0461400 (Os04g0461400)
           mRNA, complete cds
          Length = 1318

 Score =  184 bits (93), Expect = 3e-43
 Identities = 139/153 (90%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                       
Query: 181 tctcagctgctgcaagtggaggcggcaagctggaggcagcaactgcataccttgcaagaa 240
           |||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 178 tctcagttgctgcaagtggaggcggcaagctagagacagcaactgcatatcttgcaagaa 237

                                                                       
Query: 241 aatcg-ttttctggtcataccggtgattttcctgcaagttgtgcagttgctgtctcaagc 299
           ||||| |||| ||| ||||||| |||||||| |||||| |||||||||| ||||||||||
Sbjct: 238 aatcggttttatggccataccgatgattttcttgcaagctgtgcagttgttgtctcaagc 297

                                            
Query: 300 ttgctgcctcccgttgccaaaactattgaatat 332
           |||||||||||| |||||| |||||||| ||||
Sbjct: 298 ttgctgcctccctttgccagaactattggatat 330


>dbj|AK066992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089P17, full
           insert sequence
          Length = 1319

 Score =  184 bits (93), Expect = 3e-43
 Identities = 139/153 (90%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                       
Query: 181 tctcagctgctgcaagtggaggcggcaagctggaggcagcaactgcataccttgcaagaa 240
           |||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 179 tctcagttgctgcaagtggaggcggcaagctagagacagcaactgcatatcttgcaagaa 238

                                                                       
Query: 241 aatcg-ttttctggtcataccggtgattttcctgcaagttgtgcagttgctgtctcaagc 299
           ||||| |||| ||| ||||||| |||||||| |||||| |||||||||| ||||||||||
Sbjct: 239 aatcggttttatggccataccgatgattttcttgcaagctgtgcagttgttgtctcaagc 298

                                            
Query: 300 ttgctgcctcccgttgccaaaactattgaatat 332
           |||||||||||| |||||| |||||||| ||||
Sbjct: 299 ttgctgcctccctttgccagaactattggatat 331


>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Minus

                                                                            
Query: 255      cataccggtgattttcctgcaagttgtgcagttgctgtctcaagcttgctgcctcccgtt 314
                ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 22319874 cataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcccttt 22319815

                           
Query: 315      gccaaaactat 325
                |||||||||||
Sbjct: 22319814 gccaaaactat 22319804



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 267      tttcctgcaagttgtgcagttgctgtctcaagcttgctgcctcccgttgccaaaactat 325
                |||| |||||||||||||||||||| |||||||||||||||||||  ||||||| ||||
Sbjct: 30479723 tttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccctctgccaaatctat 30479665


>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1267B06
          Length = 156989

 Score =  109 bits (55), Expect = 1e-20
 Identities = 67/71 (94%)
 Strand = Plus / Minus

                                                                         
Query: 255   cataccggtgattttcctgcaagttgtgcagttgctgtctcaagcttgctgcctcccgtt 314
             ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 78518 cataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcccttt 78459

                        
Query: 315   gccaaaactat 325
             |||||||||||
Sbjct: 78458 gccaaaactat 78448


>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  103 bits (52), Expect = 8e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                            
Query: 245      gttttctggtcataccggtgattttcctgcaagttgtgcagttgctgtctcaagcttgct 304
                ||||| ||| ||||||| |||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 23021494 gttttatggccataccgatgattttcttgcaagctgtgcagttgttgtctcaagcttgct 23021435

                                            
Query: 305      gcctcccgttgccaaaactattgaatat 332
                ||||||| |||||| |||||||| ||||
Sbjct: 23021434 gcctccctttgccagaactattggatat 23021407



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 188      tgctgcaagtggaggcggcaagctggaggcagcaactgcataccttgcaagaaaatcgt 246
                |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 23028312 tgctgcaagtggaggcggcaagctagagacagcaactgcatatcttgcaagaaaatcgt 23028254