BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst027p10
         (631 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001067713.1| Oryza sativa (japonica cultivar-group) Os08g...   149   2e-32
gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nuc...   149   2e-32
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...   149   2e-32
dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic D...   149   2e-32
dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clon...   149   2e-32

>ref|NM_001067713.1| Oryza sativa (japonica cultivar-group) Os08g0192900 (Os08g0192900)
           mRNA, complete cds
          Length = 2089

 Score =  149 bits (75), Expect = 2e-32
 Identities = 137/158 (86%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                       
Query: 135 ccaaggggaaggccgggaagaagcgtggggcggaggacgagatcgagaaggcggtgagcg 194
           |||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 162 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 221

                                                                       
Query: 195 ccaagaagcagaa------ggcggcgctggcggcgaaggccgtgcccccgccaaaggacg 248
           |||||||||||||      |||||||| | |||| |||||||| ||| |||| ||||  |
Sbjct: 222 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 281

                                                 
Query: 249 gcggcaagaagcccaagaagcagccgccgcccaagaag 286
            || ||||||| ||||||||||||||||||||||||||
Sbjct: 282 acgccaagaaggccaagaagcagccgccgcccaagaag 319


>gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nucleolin (NUC) mRNA,
           complete cds
          Length = 2039

 Score =  149 bits (75), Expect = 2e-32
 Identities = 137/158 (86%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                       
Query: 135 ccaaggggaaggccgggaagaagcgtggggcggaggacgagatcgagaaggcggtgagcg 194
           |||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 76  ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 135

                                                                       
Query: 195 ccaagaagcagaa------ggcggcgctggcggcgaaggccgtgcccccgccaaaggacg 248
           |||||||||||||      |||||||| | |||| |||||||| ||| |||| ||||  |
Sbjct: 136 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 195

                                                 
Query: 249 gcggcaagaagcccaagaagcagccgccgcccaagaag 286
            || ||||||| ||||||||||||||||||||||||||
Sbjct: 196 acgccaagaaggccaagaagcagccgccgcccaagaag 233


>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  149 bits (75), Expect = 2e-32
 Identities = 137/158 (86%), Gaps = 6/158 (3%)
 Strand = Plus / Minus

                                                                           
Query: 135     ccaaggggaaggccgggaagaagcgtggggcggaggacgagatcgagaaggcggtgagcg 194
               |||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 5420169 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 5420110

                                                                           
Query: 195     ccaagaagcagaa------ggcggcgctggcggcgaaggccgtgcccccgccaaaggacg 248
               |||||||||||||      |||||||| | |||| |||||||| ||| |||| ||||  |
Sbjct: 5420109 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 5420050

                                                     
Query: 249     gcggcaagaagcccaagaagcagccgccgcccaagaag 286
                || ||||||| ||||||||||||||||||||||||||
Sbjct: 5420049 acgccaagaaggccaagaagcagccgccgcccaagaag 5420012


>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score =  149 bits (75), Expect = 2e-32
 Identities = 137/158 (86%), Gaps = 6/158 (3%)
 Strand = Plus / Minus

                                                                         
Query: 135   ccaaggggaaggccgggaagaagcgtggggcggaggacgagatcgagaaggcggtgagcg 194
             |||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 89980 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 89921

                                                                         
Query: 195   ccaagaagcagaa------ggcggcgctggcggcgaaggccgtgcccccgccaaaggacg 248
             |||||||||||||      |||||||| | |||| |||||||| ||| |||| ||||  |
Sbjct: 89920 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 89861

                                                   
Query: 249   gcggcaagaagcccaagaagcagccgccgcccaagaag 286
              || ||||||| ||||||||||||||||||||||||||
Sbjct: 89860 acgccaagaaggccaagaagcagccgccgcccaagaag 89823


>dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K11, full
           insert sequence
          Length = 2089

 Score =  149 bits (75), Expect = 2e-32
 Identities = 137/158 (86%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                       
Query: 135 ccaaggggaaggccgggaagaagcgtggggcggaggacgagatcgagaaggcggtgagcg 194
           |||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 163 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 222

                                                                       
Query: 195 ccaagaagcagaa------ggcggcgctggcggcgaaggccgtgcccccgccaaaggacg 248
           |||||||||||||      |||||||| | |||| |||||||| ||| |||| ||||  |
Sbjct: 223 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 282

                                                 
Query: 249 gcggcaagaagcccaagaagcagccgccgcccaagaag 286
            || ||||||| ||||||||||||||||||||||||||
Sbjct: 283 acgccaagaaggccaagaagcagccgccgcccaagaag 320