BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst027n09
         (676 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   121   4e-24
gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome...   121   4e-24
gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome...   121   4e-24
ref|NM_001056189.1| Oryza sativa (japonica cultivar-group) Os03g...   113   9e-22
dbj|AK104949.1| Oryza sativa (japonica cultivar-group) cDNA clon...   113   9e-22

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  121 bits (61), Expect = 4e-24
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                           
Query: 470     caggaggggcgggtggtcagcggcgctgagcaaggtggaacattacgcggtccagagggt 529
               |||||||||||||||||| | |||||||| ||||||||| || |||| ||||||||||||
Sbjct: 8761265 caggaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccagagggt 8761324

                                                    
Query: 530     cacgggcgatgaccggtgcatgtttcgagcgttggta 566
               |||||| |||| ||||||||||||||| |||||||||
Sbjct: 8761325 cacgggtgatggccggtgcatgtttcgggcgttggta 8761361


>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
            complete sequence
          Length = 112265

 Score =  121 bits (61), Expect = 4e-24
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                        
Query: 470  caggaggggcgggtggtcagcggcgctgagcaaggtggaacattacgcggtccagagggt 529
            |||||||||||||||||| | |||||||| ||||||||| || |||| ||||||||||||
Sbjct: 6583 caggaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccagagggt 6642

                                                 
Query: 530  cacgggcgatgaccggtgcatgtttcgagcgttggta 566
            |||||| |||| ||||||||||||||| |||||||||
Sbjct: 6643 cacgggtgatggccggtgcatgtttcgggcgttggta 6679


>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
              complete sequence
          Length = 115270

 Score =  121 bits (61), Expect = 4e-24
 Identities = 88/97 (90%)
 Strand = Plus / Plus

                                                                          
Query: 470    caggaggggcgggtggtcagcggcgctgagcaaggtggaacattacgcggtccagagggt 529
              |||||||||||||||||| | |||||||| ||||||||| || |||| ||||||||||||
Sbjct: 107081 caggaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccagagggt 107140

                                                   
Query: 530    cacgggcgatgaccggtgcatgtttcgagcgttggta 566
              |||||| |||| ||||||||||||||| |||||||||
Sbjct: 107141 cacgggtgatggccggtgcatgtttcgggcgttggta 107177


>ref|NM_001056189.1| Oryza sativa (japonica cultivar-group) Os03g0266000 (Os03g0266000)
           mRNA, complete cds
          Length = 954

 Score =  113 bits (57), Expect = 9e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                       
Query: 473 gaggggcgggtggtcagcggcgctgagcaaggtggaacattacgcggtccagagggtcac 532
           ||||||||||||||| | |||||||| ||||||||| || |||| |||||||||||||||
Sbjct: 236 gaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccagagggtcac 295

                                            
Query: 533 gggcgatgaccggtgcatgtttcgagcgttggt 565
           ||| |||| ||||||||||||||| ||||||||
Sbjct: 296 gggtgatggccggtgcatgtttcgggcgttggt 328


>dbj|AK104949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-H02, full
           insert sequence
          Length = 912

 Score =  113 bits (57), Expect = 9e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                       
Query: 473 gaggggcgggtggtcagcggcgctgagcaaggtggaacattacgcggtccagagggtcac 532
           ||||||||||||||| | |||||||| ||||||||| || |||| |||||||||||||||
Sbjct: 228 gaggggcgggtggtcgggggcgctgaacaaggtggagcactacggggtccagagggtcac 287

                                            
Query: 533 gggcgatgaccggtgcatgtttcgagcgttggt 565
           ||| |||| ||||||||||||||| ||||||||
Sbjct: 288 gggtgatggccggtgcatgtttcgggcgttggt 320