BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027l23 (994 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome... 301 3e-78 gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome... 301 3e-78 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 301 3e-78 ref|NM_001062604.1| Oryza sativa (japonica cultivar-group) Os05g... 295 2e-76 >gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 301 bits (152), Expect = 3e-78 Identities = 296/344 (86%) Strand = Plus / Minus Query: 440 ctcttacgatgctcggagggcccttcaaaagaatggtatccaactaagcagtggtctcat 499 |||||| |||||||||| |||||||||||||||||| |||| ||||||||||| |||| Sbjct: 137428 ctcttatgatgctcggaaagcccttcaaaagaatggtgtccagctaagcagtggcgtcat 137369 Query: 500 aattggagtgaagcctattgatccaatgcaccgacggcagctggatgagagattcactgg 559 ||||| ||||||||||||||||||||||| | | |||||| |||||||| ||| |||| Sbjct: 137368 tattggggtgaagcctattgatccaatgcataggcagcagctcgatgagaggttcgctgg 137309 Query: 560 aagcaatcaagggggcttcatggtttcctttccttcaaagtcacttgtcctgaagaccac 619 || ||| ||||| ||||||||||||||||| ||| ||||||| ||||| |||||| || Sbjct: 137308 aaacaaacaaggaggcttcatggtttccttgcctccaaagtctcttgttctgaagggtac 137249 Query: 620 aggtgcatcaaaccagttaggagcgttgccacgtccatatgatccgaaggctaacccaaa 679 ||||| || || ||||| ||||| |||||||| || |||||||| || |||||| |||| Sbjct: 137248 cggtgcgtcgaatcagttgggagccttgccacgcccctatgatcctaaagctaacacaaa 137189 Query: 680 tgttatcagagatgcaggtcgtcgtgcaacaggcagcgttgctgcaccagcaaaatctat 739 |||||||||||| || |||||||||||||| |||||||||||||||||||||||| | Sbjct: 137188 tgttatcagagacgctaaccgtcgtgcaacaggtagcgttgctgcaccagcaaaatctct 137129 Query: 740 tgtaaccaatgtcatggatctgatatttggcatttaacttgcca 783 |||||| ||||| |||||| |||||||||||||||||| ||||| Sbjct: 137128 tgtaacgaatgtgatggatttgatatttggcatttaacctgcca 137085 Score = 107 bits (54), Expect = 9e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 342 accaaccttgttcttcgggagttcgagaaatgtggtgtaatattgagacatcactctggt 401 |||||||||||| | ||||| || |||||||| || ||||| ||| | |||||||||||| Sbjct: 137993 accaaccttgttatccgggaatttgagaaatgcggagtaattttgcggcatcactctggt 137934 Query: 402 ccaagagatggtaattggatccacatattatatc 435 ||| |||||||||||||||||||||||||||||| Sbjct: 137933 ccacgagatggtaattggatccacatattatatc 137900 Score = 105 bits (53), Expect = 3e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 185 cgcggcagtcccccttcttccgcgacctcgcctcccccatcccgtcccaccgcgccgcct 244 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 138859 cgcggcagtccccgttcttccgggacctcgcctccccgatcccgtcccaccgcgcggcct 138800 Query: 245 cgcgcttcgcctc 257 | ||||||||||| Sbjct: 138799 cccgcttcgcctc 138787 >gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 301 bits (152), Expect = 3e-78 Identities = 296/344 (86%) Strand = Plus / Minus Query: 440 ctcttacgatgctcggagggcccttcaaaagaatggtatccaactaagcagtggtctcat 499 |||||| |||||||||| |||||||||||||||||| |||| ||||||||||| |||| Sbjct: 33390 ctcttatgatgctcggaaagcccttcaaaagaatggtgtccagctaagcagtggcgtcat 33331 Query: 500 aattggagtgaagcctattgatccaatgcaccgacggcagctggatgagagattcactgg 559 ||||| ||||||||||||||||||||||| | | |||||| |||||||| ||| |||| Sbjct: 33330 tattggggtgaagcctattgatccaatgcataggcagcagctcgatgagaggttcgctgg 33271 Query: 560 aagcaatcaagggggcttcatggtttcctttccttcaaagtcacttgtcctgaagaccac 619 || ||| ||||| ||||||||||||||||| ||| ||||||| ||||| |||||| || Sbjct: 33270 aaacaaacaaggaggcttcatggtttccttgcctccaaagtctcttgttctgaagggtac 33211 Query: 620 aggtgcatcaaaccagttaggagcgttgccacgtccatatgatccgaaggctaacccaaa 679 ||||| || || ||||| ||||| |||||||| || |||||||| || |||||| |||| Sbjct: 33210 cggtgcgtcgaatcagttgggagccttgccacgcccctatgatcctaaagctaacacaaa 33151 Query: 680 tgttatcagagatgcaggtcgtcgtgcaacaggcagcgttgctgcaccagcaaaatctat 739 |||||||||||| || |||||||||||||| |||||||||||||||||||||||| | Sbjct: 33150 tgttatcagagacgctaaccgtcgtgcaacaggtagcgttgctgcaccagcaaaatctct 33091 Query: 740 tgtaaccaatgtcatggatctgatatttggcatttaacttgcca 783 |||||| ||||| |||||| |||||||||||||||||| ||||| Sbjct: 33090 tgtaacgaatgtgatggatttgatatttggcatttaacctgcca 33047 Score = 107 bits (54), Expect = 9e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 342 accaaccttgttcttcgggagttcgagaaatgtggtgtaatattgagacatcactctggt 401 |||||||||||| | ||||| || |||||||| || ||||| ||| | |||||||||||| Sbjct: 33955 accaaccttgttatccgggaatttgagaaatgcggagtaattttgcggcatcactctggt 33896 Query: 402 ccaagagatggtaattggatccacatattatatc 435 ||| |||||||||||||||||||||||||||||| Sbjct: 33895 ccacgagatggtaattggatccacatattatatc 33862 Score = 105 bits (53), Expect = 3e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 185 cgcggcagtcccccttcttccgcgacctcgcctcccccatcccgtcccaccgcgccgcct 244 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 34821 cgcggcagtccccgttcttccgggacctcgcctccccgatcccgtcccaccgcgcggcct 34762 Query: 245 cgcgcttcgcctc 257 | ||||||||||| Sbjct: 34761 cccgcttcgcctc 34749 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 301 bits (152), Expect = 3e-78 Identities = 296/344 (86%) Strand = Plus / Minus Query: 440 ctcttacgatgctcggagggcccttcaaaagaatggtatccaactaagcagtggtctcat 499 |||||| |||||||||| |||||||||||||||||| |||| ||||||||||| |||| Sbjct: 25621021 ctcttatgatgctcggaaagcccttcaaaagaatggtgtccagctaagcagtggcgtcat 25620962 Query: 500 aattggagtgaagcctattgatccaatgcaccgacggcagctggatgagagattcactgg 559 ||||| ||||||||||||||||||||||| | | |||||| |||||||| ||| |||| Sbjct: 25620961 tattggggtgaagcctattgatccaatgcataggcagcagctcgatgagaggttcgctgg 25620902 Query: 560 aagcaatcaagggggcttcatggtttcctttccttcaaagtcacttgtcctgaagaccac 619 || ||| ||||| ||||||||||||||||| ||| ||||||| ||||| |||||| || Sbjct: 25620901 aaacaaacaaggaggcttcatggtttccttgcctccaaagtctcttgttctgaagggtac 25620842 Query: 620 aggtgcatcaaaccagttaggagcgttgccacgtccatatgatccgaaggctaacccaaa 679 ||||| || || ||||| ||||| |||||||| || |||||||| || |||||| |||| Sbjct: 25620841 cggtgcgtcgaatcagttgggagccttgccacgcccctatgatcctaaagctaacacaaa 25620782 Query: 680 tgttatcagagatgcaggtcgtcgtgcaacaggcagcgttgctgcaccagcaaaatctat 739 |||||||||||| || |||||||||||||| |||||||||||||||||||||||| | Sbjct: 25620781 tgttatcagagacgctaaccgtcgtgcaacaggtagcgttgctgcaccagcaaaatctct 25620722 Query: 740 tgtaaccaatgtcatggatctgatatttggcatttaacttgcca 783 |||||| ||||| |||||| |||||||||||||||||| ||||| Sbjct: 25620721 tgtaacgaatgtgatggatttgatatttggcatttaacctgcca 25620678 Score = 107 bits (54), Expect = 9e-20 Identities = 84/94 (89%) Strand = Plus / Minus Query: 342 accaaccttgttcttcgggagttcgagaaatgtggtgtaatattgagacatcactctggt 401 |||||||||||| | ||||| || |||||||| || ||||| ||| | |||||||||||| Sbjct: 25621586 accaaccttgttatccgggaatttgagaaatgcggagtaattttgcggcatcactctggt 25621527 Query: 402 ccaagagatggtaattggatccacatattatatc 435 ||| |||||||||||||||||||||||||||||| Sbjct: 25621526 ccacgagatggtaattggatccacatattatatc 25621493 Score = 105 bits (53), Expect = 3e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 185 cgcggcagtcccccttcttccgcgacctcgcctcccccatcccgtcccaccgcgccgcct 244 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 25622452 cgcggcagtccccgttcttccgggacctcgcctccccgatcccgtcccaccgcgcggcct 25622393 Query: 245 cgcgcttcgcctc 257 | ||||||||||| Sbjct: 25622392 cccgcttcgcctc 25622380 >ref|NM_001062604.1| Oryza sativa (japonica cultivar-group) Os05g0520100 (Os05g0520100) mRNA, complete cds Length = 1062 Score = 295 bits (149), Expect = 2e-76 Identities = 290/337 (86%) Strand = Plus / Plus Query: 440 ctcttacgatgctcggagggcccttcaaaagaatggtatccaactaagcagtggtctcat 499 |||||| |||||||||| |||||||||||||||||| |||| ||||||||||| |||| Sbjct: 726 ctcttatgatgctcggaaagcccttcaaaagaatggtgtccagctaagcagtggcgtcat 785 Query: 500 aattggagtgaagcctattgatccaatgcaccgacggcagctggatgagagattcactgg 559 ||||| ||||||||||||||||||||||| | | |||||| |||||||| ||| |||| Sbjct: 786 tattggggtgaagcctattgatccaatgcataggcagcagctcgatgagaggttcgctgg 845 Query: 560 aagcaatcaagggggcttcatggtttcctttccttcaaagtcacttgtcctgaagaccac 619 || ||| ||||| ||||||||||||||||| ||| ||||||| ||||| |||||| || Sbjct: 846 aaacaaacaaggaggcttcatggtttccttgcctccaaagtctcttgttctgaagggtac 905 Query: 620 aggtgcatcaaaccagttaggagcgttgccacgtccatatgatccgaaggctaacccaaa 679 ||||| || || ||||| ||||| |||||||| || |||||||| || |||||| |||| Sbjct: 906 cggtgcgtcgaatcagttgggagccttgccacgcccctatgatcctaaagctaacacaaa 965 Query: 680 tgttatcagagatgcaggtcgtcgtgcaacaggcagcgttgctgcaccagcaaaatctat 739 |||||||||||| || |||||||||||||| |||||||||||||||||||||||| | Sbjct: 966 tgttatcagagacgctaaccgtcgtgcaacaggtagcgttgctgcaccagcaaaatctct 1025 Query: 740 tgtaaccaatgtcatggatctgatatttggcatttaa 776 |||||| ||||| |||||| ||||||||||||||||| Sbjct: 1026 tgtaacgaatgtgatggatttgatatttggcatttaa 1062 Score = 105 bits (53), Expect = 3e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 185 cgcggcagtcccccttcttccgcgacctcgcctcccccatcccgtcccaccgcgccgcct 244 ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 56 cgcggcagtccccgttcttccgggacctcgcctccccgatcccgtcccaccgcgcggcct 115 Query: 245 cgcgcttcgcctc 257 | ||||||||||| Sbjct: 116 cccgcttcgcctc 128