BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027k06 (1240 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073623.1| Oryza sativa (japonica cultivar-group) Os12g... 924 0.0 dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 924 0.0 ref|NM_001052983.1| Oryza sativa (japonica cultivar-group) Os02g... 910 0.0 gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, compl... 910 0.0 dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 910 0.0 >ref|NM_001073623.1| Oryza sativa (japonica cultivar-group) Os12g0572400 (Os12g0572400) mRNA, complete cds Length = 1250 Score = 924 bits (466), Expect = 0.0 Identities = 725/810 (89%), Gaps = 6/810 (0%) Strand = Plus / Plus Query: 100 acaaaacaatgaggaggtacagccccccgtatcgtagtcccccaaggaggggatatggcg 159 ||||||||||||||||||||||||| || ||||| |||||||| |||||||| ||||| | Sbjct: 79 acaaaacaatgaggaggtacagcccaccatatcgcagtccccctaggaggggctatggtg 138 Query: 160 gcagaggaagaagtccccctaggaggggatatggaggacggaaggagcagggttctggaa 219 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139 gcagaggaagaagtccccctaggaggggatatggaggacggagggagcagggttctggaa 198 Query: 220 gtctcttggtccgcaacatcccattaagctgcagagcggaggatcttcgagttccttttg 279 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 199 gtctcttggtccgcaacatcccattaagctgcagaggggaggatcttcgagttccttttg 258 Query: 280 aaaggtttggccctgttcgggatgtttacctgccaaaggattattacagcggggagccgc 339 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 259 aaaggtttggtcctgttcgggatgtttacctgccaaaggattattacagcggggaaccac 318 Query: 340 gtgggtttgcatttgtcgagtttgttgacccttatgacgcctccgaggcccaatatcaca 399 | || ||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct: 319 ggggatttgcatttgtggagttcgttgacccttatgatgcctctgaggctcaatatcaca 378 Query: 400 tgaatcgccaggtattttttggccgggagataactgttgttcttgctgctgaatcacgga 459 ||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| Sbjct: 379 tgaatcgccaggtgtttttcggccgggagataactgttgttcttgctgctgagtcgcgga 438 Query: 460 aaaggccagaggaaatgcacagtagagctagagtcagggggtattctggtcatgaagggc 519 |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||||||| Sbjct: 439 aaaggccagaggaaatgcgcagtagagctagagtcaggggttactctggaaacgaagggc 498 Query: 520 gccgttcctcccattatgggaggtctcgttcccgttcccgctcccgctccccgcgctatc 579 |||| || || ||||||||||||||||||||||||| |||| ||||| | ||||| Sbjct: 499 gccgctcttcatattatgggaggtctcgttcccgttctcgct----ctccc--cactatc 552 Query: 580 gaggccgtcctcggtcaaggtcatattctcctgctccaagacggcgagatgactactctg 639 |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 553 gaggtcgtccacggtcaaggtcatactctcctgctccaagacggcgagatgactactcag 612 Query: 640 cttccccacgaaggaaggagtcacatcgcacaaaatctcccaggcgtcagccaaaagaac 699 ||||||||| || ||||| | || | |||||||||||| ||||||||||||||||||| Sbjct: 613 cttccccaccgagaaaggatacgcaccccacaaaatctcctaggcgtcagccaaaagaac 672 Query: 700 atgaagaagacaagaagcggaggtcttattctcccgctagtagagatggtgatcaacgtg 759 |||| ||||| ||||||||||| || || ||||| || ||||||||||| || | || | Sbjct: 673 atgatgaagagaagaagcggagatcctactctcctgccagtagagatggcgaccctcgcg 732 Query: 760 atgctgataatgcttacgagaagaggtcgtcgccacctgacagcgacgaatcccctccac 819 |||||||||| | ||| |||||||||||| | |||||||||||||| | ||||||||||| Sbjct: 733 atgctgataacggttatgagaagaggtcgcccccacctgacagcgatggatcccctccac 792 Query: 820 accggaggtcgcccaggcaatcctcagggttgcctccgggatcccgctccaggtctgccg 879 |||||||||| || ||||| |||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 793 accggaggtctcctaggcactcctcagggtcgcctccaggatcccgctctaggtccgccg 852 Query: 880 acgggtctcctgccggcagtgactgacaga 909 | | || |||||| |||| |||||||||| Sbjct: 853 atgtttcccctgcccgcagcgactgacaga 882 >dbj|AK065531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034H02, full insert sequence Length = 1250 Score = 924 bits (466), Expect = 0.0 Identities = 725/810 (89%), Gaps = 6/810 (0%) Strand = Plus / Plus Query: 100 acaaaacaatgaggaggtacagccccccgtatcgtagtcccccaaggaggggatatggcg 159 ||||||||||||||||||||||||| || ||||| |||||||| |||||||| ||||| | Sbjct: 79 acaaaacaatgaggaggtacagcccaccatatcgcagtccccctaggaggggctatggtg 138 Query: 160 gcagaggaagaagtccccctaggaggggatatggaggacggaaggagcagggttctggaa 219 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 139 gcagaggaagaagtccccctaggaggggatatggaggacggagggagcagggttctggaa 198 Query: 220 gtctcttggtccgcaacatcccattaagctgcagagcggaggatcttcgagttccttttg 279 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 199 gtctcttggtccgcaacatcccattaagctgcagaggggaggatcttcgagttccttttg 258 Query: 280 aaaggtttggccctgttcgggatgtttacctgccaaaggattattacagcggggagccgc 339 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 259 aaaggtttggtcctgttcgggatgtttacctgccaaaggattattacagcggggaaccac 318 Query: 340 gtgggtttgcatttgtcgagtttgttgacccttatgacgcctccgaggcccaatatcaca 399 | || ||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct: 319 ggggatttgcatttgtggagttcgttgacccttatgatgcctctgaggctcaatatcaca 378 Query: 400 tgaatcgccaggtattttttggccgggagataactgttgttcttgctgctgaatcacgga 459 ||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| Sbjct: 379 tgaatcgccaggtgtttttcggccgggagataactgttgttcttgctgctgagtcgcgga 438 Query: 460 aaaggccagaggaaatgcacagtagagctagagtcagggggtattctggtcatgaagggc 519 |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||||||| Sbjct: 439 aaaggccagaggaaatgcgcagtagagctagagtcaggggttactctggaaacgaagggc 498 Query: 520 gccgttcctcccattatgggaggtctcgttcccgttcccgctcccgctccccgcgctatc 579 |||| || || ||||||||||||||||||||||||| |||| ||||| | ||||| Sbjct: 499 gccgctcttcatattatgggaggtctcgttcccgttctcgct----ctccc--cactatc 552 Query: 580 gaggccgtcctcggtcaaggtcatattctcctgctccaagacggcgagatgactactctg 639 |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 553 gaggtcgtccacggtcaaggtcatactctcctgctccaagacggcgagatgactactcag 612 Query: 640 cttccccacgaaggaaggagtcacatcgcacaaaatctcccaggcgtcagccaaaagaac 699 ||||||||| || ||||| | || | |||||||||||| ||||||||||||||||||| Sbjct: 613 cttccccaccgagaaaggatacgcaccccacaaaatctcctaggcgtcagccaaaagaac 672 Query: 700 atgaagaagacaagaagcggaggtcttattctcccgctagtagagatggtgatcaacgtg 759 |||| ||||| ||||||||||| || || ||||| || ||||||||||| || | || | Sbjct: 673 atgatgaagagaagaagcggagatcctactctcctgcaagtagagatggcgaccctcgcg 732 Query: 760 atgctgataatgcttacgagaagaggtcgtcgccacctgacagcgacgaatcccctccac 819 |||||||||| | ||| |||||||||||| | |||||||||||||| | ||||||||||| Sbjct: 733 atgctgataacggttatgagaagaggtcgcccccacctgacagcgatggatcccctccac 792 Query: 820 accggaggtcgcccaggcaatcctcagggttgcctccgggatcccgctccaggtctgccg 879 |||||||||| || ||||| |||||||||| |||||| ||||||||||| ||||| |||| Sbjct: 793 accggaggtctcctaggcactcctcagggtcgcctccaggatcccgctctaggtccgccg 852 Query: 880 acgggtctcctgccggcagtgactgacaga 909 | | || |||||| |||| |||||||||| Sbjct: 853 atgtttcccctgcccgcagcgactgacaga 882 >ref|NM_001052983.1| Oryza sativa (japonica cultivar-group) Os02g0252100 (Os02g0252100) mRNA, complete cds Length = 1265 Score = 910 bits (459), Expect = 0.0 Identities = 729/819 (89%) Strand = Plus / Plus Query: 91 actcaccgaacaaaacaatgaggaggtacagccccccgtatcgtagtcccccaaggaggg 150 ||||||| ||||||||||||||||||| || || || ||||| ||||| |||||||||| Sbjct: 109 actcacccgacaaaacaatgaggaggtatagtccaccttatcgcagtccaccaaggaggg 168 Query: 151 gatatggcggcagaggaagaagtccccctaggaggggatatggaggacggaaggagcagg 210 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 169 gatatggtggcagaggaagaagtccccctaggaggggatatggaggacggaaggaacagg 228 Query: 211 gttctggaagtctcttggtccgcaacatcccattaagctgcagagcggaggatcttcgag 270 ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 229 gttctggcagtctcctggtccgcaacatccctttaagctgcagagcggaggatcttagag 288 Query: 271 ttccttttgaaaggtttggccctgttcgggatgtttacctgccaaaggattattacagcg 330 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | || Sbjct: 289 ttccttttgaaaggtttggacctgttcgagatgtttacctgccaaaggattattataccg 348 Query: 331 gggagccgcgtgggtttgcatttgtcgagtttgttgacccttatgacgcctccgaggccc 390 |||| ||||| ||||||||||| || |||||||||||||||||||| || || ||||||| Sbjct: 349 gggaaccgcgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggccc 408 Query: 391 aatatcacatgaatcgccaggtattttttggccgggagataactgttgttcttgctgctg 450 ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 409 aatatcatatgaatcgtcaggtggtttttggccgggagataactgttgttcttgctgctg 468 Query: 451 aatcacggaaaaggccagaggaaatgcacagtagagctagagtcagggggtattctggtc 510 | ||||||||||||||||| || |||| ||||||||| |||||||| ||||| |||| | Sbjct: 469 agtcacggaaaaggccagaagagatgcgcagtagagccagagtcagagggtactctgacc 528 Query: 511 atgaagggcgccgttcctcccattatgggaggtctcgttcccgttcccgctcccgctccc 570 ||||||| || ||||| |||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 529 atgaaggccgtcgttcatcccattacgggaggtctcgttcacgttcgcgttcccgctctc 588 Query: 571 cgcgctatcgaggccgtcctcggtcaaggtcatattctcctgctccaagacggcgagatg 630 | || ||||| || ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 589 cccgttatcgtggtcgtccacggtcaaggtcatactctcctgctccaagacgacgagatg 648 Query: 631 actactctgcttccccacgaaggaaggagtcacatcgcacaaaatctcccaggcgtcagc 690 |||| || || ||||||| || || || ||||||| |||||||||| |||||||||| Sbjct: 649 actattccgcatccccacagagaaaagacacacatcgtgcaaaatctcctaggcgtcagc 708 Query: 691 caaaagaacatgaagaagacaagaagcggaggtcttattctcccgctagtagagatggtg 750 ||||||||||||||| ||||||||||||||| || |||||||| || | || |||||| | Sbjct: 709 caaaagaacatgaagtagacaagaagcggagatcctattctcctgccaataaagatgggg 768 Query: 751 atcaacgtgatgctgataatgcttacgagaagaggtcgtcgccacctgacagcgacgaat 810 | | |||||||||||||||| ||| || ||||||||| ||||| |||||||||| | || Sbjct: 769 accggcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacagcgatggat 828 Query: 811 cccctccacaccggaggtcgcccaggcaatcctcagggttgcctccgggatcccgctcca 870 ||||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||||||| Sbjct: 829 cccctccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatcccgctcca 888 Query: 871 ggtctgccgacgggtctcctgccggcagtgactgacaga 909 ||||||||||||||||||||||| ||||||||| ||||| Sbjct: 889 ggtctgccgacgggtctcctgcccgcagtgactaacaga 927 >gb|AF139211.2| Oryza sativa pre-mRNA splicing factor mRNA, complete cds Length = 1190 Score = 910 bits (459), Expect = 0.0 Identities = 729/819 (89%) Strand = Plus / Plus Query: 91 actcaccgaacaaaacaatgaggaggtacagccccccgtatcgtagtcccccaaggaggg 150 ||||||| ||||||||||||||||||| || || || ||||| ||||| |||||||||| Sbjct: 110 actcacccgacaaaacaatgaggaggtatagtccaccttatcgcagtccaccaaggaggg 169 Query: 151 gatatggcggcagaggaagaagtccccctaggaggggatatggaggacggaaggagcagg 210 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 170 gatatggtggcagaggaagaagtccccctaggaggggatatggaggacggaaggaacagg 229 Query: 211 gttctggaagtctcttggtccgcaacatcccattaagctgcagagcggaggatcttcgag 270 ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 230 gttctggcagtctcctggtccgcaacatccctttaagctgcagagcggaggatcttagag 289 Query: 271 ttccttttgaaaggtttggccctgttcgggatgtttacctgccaaaggattattacagcg 330 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | || Sbjct: 290 ttccttttgaaaggtttggacctgttcgagatgtttacctgccaaaggattattataccg 349 Query: 331 gggagccgcgtgggtttgcatttgtcgagtttgttgacccttatgacgcctccgaggccc 390 |||| ||||| ||||||||||| || |||||||||||||||||||| || || ||||||| Sbjct: 350 gggaaccgcgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggccc 409 Query: 391 aatatcacatgaatcgccaggtattttttggccgggagataactgttgttcttgctgctg 450 ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 410 aatatcatatgaatcgtcaggtggtttttggccgggagataactgttgttcttgctgctg 469 Query: 451 aatcacggaaaaggccagaggaaatgcacagtagagctagagtcagggggtattctggtc 510 | ||||||||||||||||| || |||| ||||||||| |||||||| ||||| |||| | Sbjct: 470 agtcacggaaaaggccagaagagatgcgcagtagagccagagtcagagggtactctgacc 529 Query: 511 atgaagggcgccgttcctcccattatgggaggtctcgttcccgttcccgctcccgctccc 570 ||||||| || ||||| |||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 530 atgaaggccgtcgttcatcccattacgggaggtctcgttcacgttcgcgttcccgctctc 589 Query: 571 cgcgctatcgaggccgtcctcggtcaaggtcatattctcctgctccaagacggcgagatg 630 | || ||||| || ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 590 cccgttatcgtggtcgtccacggtcaaggtcatactctcctgctccaagacgacgagatg 649 Query: 631 actactctgcttccccacgaaggaaggagtcacatcgcacaaaatctcccaggcgtcagc 690 |||| || || ||||||| || || || ||||||| |||||||||| |||||||||| Sbjct: 650 actattccgcatccccacagagaaaagacacacatcgtgcaaaatctcctaggcgtcagc 709 Query: 691 caaaagaacatgaagaagacaagaagcggaggtcttattctcccgctagtagagatggtg 750 ||||||||||||||| ||||||||||||||| || |||||||| || | || |||||| | Sbjct: 710 caaaagaacatgaagtagacaagaagcggagatcctattctcctgccaataaagatgggg 769 Query: 751 atcaacgtgatgctgataatgcttacgagaagaggtcgtcgccacctgacagcgacgaat 810 | | |||||||||||||||| ||| || ||||||||| ||||| |||||||||| | || Sbjct: 770 accggcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacagcgatggat 829 Query: 811 cccctccacaccggaggtcgcccaggcaatcctcagggttgcctccgggatcccgctcca 870 ||||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||||||| Sbjct: 830 cccctccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatcccgctcca 889 Query: 871 ggtctgccgacgggtctcctgccggcagtgactgacaga 909 ||||||||||||||||||||||| ||||||||| ||||| Sbjct: 890 ggtctgccgacgggtctcctgcccgcagtgactaacaga 928 >dbj|AK099051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151F04, full insert sequence Length = 1177 Score = 910 bits (459), Expect = 0.0 Identities = 729/819 (89%) Strand = Plus / Plus Query: 91 actcaccgaacaaaacaatgaggaggtacagccccccgtatcgtagtcccccaaggaggg 150 ||||||| ||||||||||||||||||| || || || ||||| ||||| |||||||||| Sbjct: 110 actcacccgacaaaacaatgaggaggtatagtccaccttatcgcagtccaccaaggaggg 169 Query: 151 gatatggcggcagaggaagaagtccccctaggaggggatatggaggacggaaggagcagg 210 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 170 gatatggtggcagaggaagaagtccccctaggaggggatatggaggacggaaggaacagg 229 Query: 211 gttctggaagtctcttggtccgcaacatcccattaagctgcagagcggaggatcttcgag 270 ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 230 gttctggcagtctcctggtccgcaacatccctttaagctgcagagcggaggatcttagag 289 Query: 271 ttccttttgaaaggtttggccctgttcgggatgtttacctgccaaaggattattacagcg 330 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | || Sbjct: 290 ttccttttgaaaggtttggacctgttcgagatgtttacctgccaaaggattattataccg 349 Query: 331 gggagccgcgtgggtttgcatttgtcgagtttgttgacccttatgacgcctccgaggccc 390 |||| ||||| ||||||||||| || |||||||||||||||||||| || || ||||||| Sbjct: 350 gggaaccgcgagggtttgcattcgtggagtttgttgacccttatgatgcttctgaggccc 409 Query: 391 aatatcacatgaatcgccaggtattttttggccgggagataactgttgttcttgctgctg 450 ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 410 aatatcatatgaatcgtcaggtggtttttggccgggagataactgttgttcttgctgctg 469 Query: 451 aatcacggaaaaggccagaggaaatgcacagtagagctagagtcagggggtattctggtc 510 | ||||||||||||||||| || |||| ||||||||| |||||||| ||||| |||| | Sbjct: 470 agtcacggaaaaggccagaagagatgcgcagtagagccagagtcagagggtactctgacc 529 Query: 511 atgaagggcgccgttcctcccattatgggaggtctcgttcccgttcccgctcccgctccc 570 ||||||| || ||||| |||||||| |||||||||||||| ||||| || |||||||| | Sbjct: 530 atgaaggccgtcgttcatcccattacgggaggtctcgttcacgttcgcgttcccgctctc 589 Query: 571 cgcgctatcgaggccgtcctcggtcaaggtcatattctcctgctccaagacggcgagatg 630 | || ||||| || ||||| |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 590 cccgttatcgtggtcgtccacggtcaaggtcatactctcctgctccaagacgacgagatg 649 Query: 631 actactctgcttccccacgaaggaaggagtcacatcgcacaaaatctcccaggcgtcagc 690 |||| || || ||||||| || || || ||||||| |||||||||| |||||||||| Sbjct: 650 actattccgcatccccacagagaaaagacacacatcgtgcaaaatctcctaggcgtcagc 709 Query: 691 caaaagaacatgaagaagacaagaagcggaggtcttattctcccgctagtagagatggtg 750 ||||||||||||||| ||||||||||||||| || |||||||| || | || |||||| | Sbjct: 710 caaaagaacatgaagtagacaagaagcggagatcctattctcctgccaataaagatgggg 769 Query: 751 atcaacgtgatgctgataatgcttacgagaagaggtcgtcgccacctgacagcgacgaat 810 | | |||||||||||||||| ||| || ||||||||| ||||| |||||||||| | || Sbjct: 770 accggcgtgatgctgataatggttatgaaaagaggtcgccgccagctgacagcgatggat 829 Query: 811 cccctccacaccggaggtcgcccaggcaatcctcagggttgcctccgggatcccgctcca 870 ||||||| ||||||||||| ||||||||||||||||| | |||||| ||||||||||||| Sbjct: 830 cccctccgcaccggaggtcccccaggcaatcctcaggatcgcctccaggatcccgctcca 889 Query: 871 ggtctgccgacgggtctcctgccggcagtgactgacaga 909 ||||||||||||||||||||||| ||||||||| ||||| Sbjct: 890 ggtctgccgacgggtctcctgcccgcagtgactaacaga 928