BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027k02 (1019 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001072282.1| Oryza sativa (japonica cultivar-group) Os11g... 642 0.0 dbj|AK102442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 642 0.0 dbj|AK100066.1| Oryza sativa (japonica cultivar-group) cDNA clon... 642 0.0 gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome... 454 e-124 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 454 e-124 >ref|NM_001072282.1| Oryza sativa (japonica cultivar-group) Os11g0148600 (Os11g0148600) mRNA, complete cds Length = 994 Score = 642 bits (324), Expect = 0.0 Identities = 477/528 (90%) Strand = Plus / Plus Query: 134 cctcccggccgcaccgcctcctacgccctctcctccgccgcttccacgcctccgcgcagg 193 |||||||||| |||| |||||| ||||||||||||||| ||||||||||| | | |||| Sbjct: 90 cctcccggcctcaccacctcctgcgccctctcctccgcggcttccacgccacttctcagg 149 Query: 194 ccctggcgagggcggagccgcacgagttctcgaagcccagcgagtacctggggagctggg 253 || |||||||| | ||||| ||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 150 ccatggcgaggcctgagccccacgagttctccaagccgagcgactacctcgggagctggg 209 Query: 254 agcccgcgggcgaaccccgggaggcgtgggcgcggctggagcggctgcgcaagggatacg 313 ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 210 agcccgcgggcgacccacgggaggcgtgggcgcggctggagcggcttcgcaagggctacg 269 Query: 314 cgcgagacgtgcggcagctgcggcggcagtacgcctacgagatgcagctgctggaggccg 373 |||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 270 cgcgcgacgtgcggcagctgcggaggcagtactcgtacgagatgcagctgctggaggccg 329 Query: 374 agcggcagcgcaaggcggaggcgcgcgccgaggccgcccgcatcgccaacgaggagcgca 433 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 330 agcggcagcgcaaggcggaggcccgcgccgaggccgcccgcctcgccaacgaggagcgca 389 Query: 434 aggcggccaaggtcgccgccgcgcagacacgcgctgccgagagacgtgccttcgagcaag 493 |||| |||||| ||||||||||||||| ||||| |||||| | || ||||||||| | | Sbjct: 390 aggccaccaaggccgccgccgcgcagacgcgcgccgccgagcgccgcgccttcgagaagg 449 Query: 494 acttccgccaggcccttatgaaagaaagaaccgagaagctggagagctggagggagaagg 553 |||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 450 acttccgccaagcccttatgaaagaaagagctgagaagctggagagctggagggagaagg 509 Query: 554 agaagctcaaagtgcagaagaagatggagcacagggagctcttgcgcaagcagagctcta 613 ||||||| ||||| ||||||||| ||| ||||||||||||||||||||| | ||||||| Sbjct: 510 agaagcttaaagtacagaagaaggcggatcacagggagctcttgcgcaagaaaagctcta 569 Query: 614 tgtgggttgctgaggataaactggaaaagaaaattctcgaggctatca 661 ||||||||||||||||||||||||||| | |||||| || ||||||| Sbjct: 570 tgtgggttgctgaggataaactggaaacaacaattcttgacgctatca 617 >dbj|AK102442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M12, full insert sequence Length = 916 Score = 642 bits (324), Expect = 0.0 Identities = 477/528 (90%) Strand = Plus / Plus Query: 134 cctcccggccgcaccgcctcctacgccctctcctccgccgcttccacgcctccgcgcagg 193 |||||||||| |||| |||||| ||||||||||||||| ||||||||||| | | |||| Sbjct: 92 cctcccggcctcaccacctcctgcgccctctcctccgcggcttccacgccacttctcagg 151 Query: 194 ccctggcgagggcggagccgcacgagttctcgaagcccagcgagtacctggggagctggg 253 || |||||||| | ||||| ||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 152 ccatggcgaggcctgagccccacgagttctccaagccgagcgactacctcgggagctggg 211 Query: 254 agcccgcgggcgaaccccgggaggcgtgggcgcggctggagcggctgcgcaagggatacg 313 ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 212 agcccgcgggcgacccacgggaggcgtgggcgcggctggagcggcttcgcaagggctacg 271 Query: 314 cgcgagacgtgcggcagctgcggcggcagtacgcctacgagatgcagctgctggaggccg 373 |||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 272 cgcgcgacgtgcggcagctgcggaggcagtactcgtacgagatgcagctgctggaggccg 331 Query: 374 agcggcagcgcaaggcggaggcgcgcgccgaggccgcccgcatcgccaacgaggagcgca 433 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 332 agcggcagcgcaaggcggaggcccgcgccgaggccgcccgcctcgccaacgaggagcgca 391 Query: 434 aggcggccaaggtcgccgccgcgcagacacgcgctgccgagagacgtgccttcgagcaag 493 |||| |||||| ||||||||||||||| ||||| |||||| | || ||||||||| | | Sbjct: 392 aggccaccaaggccgccgccgcgcagacgcgcgccgccgagcgccgcgccttcgagaagg 451 Query: 494 acttccgccaggcccttatgaaagaaagaaccgagaagctggagagctggagggagaagg 553 |||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 452 acttccgccaagcccttatgaaagaaagagctgagaagctggagagctggagggagaagg 511 Query: 554 agaagctcaaagtgcagaagaagatggagcacagggagctcttgcgcaagcagagctcta 613 ||||||| ||||| ||||||||| ||| ||||||||||||||||||||| | ||||||| Sbjct: 512 agaagcttaaagtacagaagaaggcggatcacagggagctcttgcgcaagaaaagctcta 571 Query: 614 tgtgggttgctgaggataaactggaaaagaaaattctcgaggctatca 661 ||||||||||||||||||||||||||| | |||||| || ||||||| Sbjct: 572 tgtgggttgctgaggataaactggaaacaacaattcttgacgctatca 619 >dbj|AK100066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161L12, full insert sequence Length = 996 Score = 642 bits (324), Expect = 0.0 Identities = 477/528 (90%) Strand = Plus / Plus Query: 134 cctcccggccgcaccgcctcctacgccctctcctccgccgcttccacgcctccgcgcagg 193 |||||||||| |||| |||||| ||||||||||||||| ||||||||||| | | |||| Sbjct: 92 cctcccggcctcaccacctcctgcgccctctcctccgcggcttccacgccacttctcagg 151 Query: 194 ccctggcgagggcggagccgcacgagttctcgaagcccagcgagtacctggggagctggg 253 || |||||||| | ||||| ||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 152 ccatggcgaggcctgagccccacgagttctccaagccgagcgactacctcgggagctggg 211 Query: 254 agcccgcgggcgaaccccgggaggcgtgggcgcggctggagcggctgcgcaagggatacg 313 ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 212 agcccgcgggcgacccacgggaggcgtgggcgcggctggagcggcttcgcaagggctacg 271 Query: 314 cgcgagacgtgcggcagctgcggcggcagtacgcctacgagatgcagctgctggaggccg 373 |||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 272 cgcgcgacgtgcggcagctgcggaggcagtactcgtacgagatgcagctgctggaggccg 331 Query: 374 agcggcagcgcaaggcggaggcgcgcgccgaggccgcccgcatcgccaacgaggagcgca 433 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 332 agcggcagcgcaaggcggaggcccgcgccgaggccgcccgcctcgccaacgaggagcgca 391 Query: 434 aggcggccaaggtcgccgccgcgcagacacgcgctgccgagagacgtgccttcgagcaag 493 |||| |||||| ||||||||||||||| ||||| |||||| | || ||||||||| | | Sbjct: 392 aggccaccaaggccgccgccgcgcagacgcgcgccgccgagcgccgcgccttcgagaagg 451 Query: 494 acttccgccaggcccttatgaaagaaagaaccgagaagctggagagctggagggagaagg 553 |||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 452 acttccgccaagcccttatgaaagaaagagctgagaagctggagagctggagggagaagg 511 Query: 554 agaagctcaaagtgcagaagaagatggagcacagggagctcttgcgcaagcagagctcta 613 ||||||| ||||| ||||||||| ||| ||||||||||||||||||||| | ||||||| Sbjct: 512 agaagcttaaagtacagaagaaggcggatcacagggagctcttgcgcaagaaaagctcta 571 Query: 614 tgtgggttgctgaggataaactggaaaagaaaattctcgaggctatca 661 ||||||||||||||||||||||||||| | |||||| || ||||||| Sbjct: 572 tgtgggttgctgaggataaactggaaacaacaattcttgacgctatca 619 >gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 454 bits (229), Expect = e-124 Identities = 340/377 (90%) Strand = Plus / Minus Query: 134 cctcccggccgcaccgcctcctacgccctctcctccgccgcttccacgcctccgcgcagg 193 |||||||||| |||| |||||| ||||||||||||||| ||||||||||| | | |||| Sbjct: 5890 cctcccggcctcaccacctcctgcgccctctcctccgcggcttccacgccacttctcagg 5831 Query: 194 ccctggcgagggcggagccgcacgagttctcgaagcccagcgagtacctggggagctggg 253 || |||||||| | ||||| ||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 5830 ccatggcgaggcctgagccccacgagttctccaagccgagcgactacctcgggagctggg 5771 Query: 254 agcccgcgggcgaaccccgggaggcgtgggcgcggctggagcggctgcgcaagggatacg 313 ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 5770 agcccgcgggcgacccacgggaggcgtgggcgcggctggagcggcttcgcaagggctacg 5711 Query: 314 cgcgagacgtgcggcagctgcggcggcagtacgcctacgagatgcagctgctggaggccg 373 |||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 5710 cgcgcgacgtgcggcagctgcggaggcagtactcgtacgagatgcagctgctggaggccg 5651 Query: 374 agcggcagcgcaaggcggaggcgcgcgccgaggccgcccgcatcgccaacgaggagcgca 433 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 5650 agcggcagcgcaaggcggaggcccgcgccgaggccgcccgcctcgccaacgaggagcgca 5591 Query: 434 aggcggccaaggtcgccgccgcgcagacacgcgctgccgagagacgtgccttcgagcaag 493 |||| |||||| ||||||||||||||| ||||| |||||| | || ||||||||| | | Sbjct: 5590 aggccaccaaggccgccgccgcgcagacgcgcgccgccgagcgccgcgccttcgagaagg 5531 Query: 494 acttccgccaggccctt 510 |||||||||| |||||| Sbjct: 5530 acttccgccaagccctt 5514 Score = 188 bits (95), Expect = 3e-44 Identities = 137/151 (90%) Strand = Plus / Minus Query: 511 atgaaagaaagaaccgagaagctggagagctggagggagaaggagaagctcaaagtgcag 570 |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 5278 atgaaagaaagagctgagaagctggagagctggagggagaaggagaagcttaaagtacag 5219 Query: 571 aagaagatggagcacagggagctcttgcgcaagcagagctctatgtgggttgctgaggat 630 |||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 5218 aagaaggcggatcacagggagctcttgcgcaagaaaagctctatgtgggttgctgaggat 5159 Query: 631 aaactggaaaagaaaattctcgaggctatca 661 |||||||||| | |||||| || ||||||| Sbjct: 5158 aaactggaaacaacaattcttgacgctatca 5128 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 454 bits (229), Expect = e-124 Identities = 340/377 (90%) Strand = Plus / Minus Query: 134 cctcccggccgcaccgcctcctacgccctctcctccgccgcttccacgcctccgcgcagg 193 |||||||||| |||| |||||| ||||||||||||||| ||||||||||| | | |||| Sbjct: 2229891 cctcccggcctcaccacctcctgcgccctctcctccgcggcttccacgccacttctcagg 2229832 Query: 194 ccctggcgagggcggagccgcacgagttctcgaagcccagcgagtacctggggagctggg 253 || |||||||| | ||||| ||||||||||| ||||| ||||| ||||| |||||||||| Sbjct: 2229831 ccatggcgaggcctgagccccacgagttctccaagccgagcgactacctcgggagctggg 2229772 Query: 254 agcccgcgggcgaaccccgggaggcgtgggcgcggctggagcggctgcgcaagggatacg 313 ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 2229771 agcccgcgggcgacccacgggaggcgtgggcgcggctggagcggcttcgcaagggctacg 2229712 Query: 314 cgcgagacgtgcggcagctgcggcggcagtacgcctacgagatgcagctgctggaggccg 373 |||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 2229711 cgcgcgacgtgcggcagctgcggaggcagtactcgtacgagatgcagctgctggaggccg 2229652 Query: 374 agcggcagcgcaaggcggaggcgcgcgccgaggccgcccgcatcgccaacgaggagcgca 433 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 2229651 agcggcagcgcaaggcggaggcccgcgccgaggccgcccgcctcgccaacgaggagcgca 2229592 Query: 434 aggcggccaaggtcgccgccgcgcagacacgcgctgccgagagacgtgccttcgagcaag 493 |||| |||||| ||||||||||||||| ||||| |||||| | || ||||||||| | | Sbjct: 2229591 aggccaccaaggccgccgccgcgcagacgcgcgccgccgagcgccgcgccttcgagaagg 2229532 Query: 494 acttccgccaggccctt 510 |||||||||| |||||| Sbjct: 2229531 acttccgccaagccctt 2229515 Score = 188 bits (95), Expect = 3e-44 Identities = 137/151 (90%) Strand = Plus / Minus Query: 511 atgaaagaaagaaccgagaagctggagagctggagggagaaggagaagctcaaagtgcag 570 |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2229279 atgaaagaaagagctgagaagctggagagctggagggagaaggagaagcttaaagtacag 2229220 Query: 571 aagaagatggagcacagggagctcttgcgcaagcagagctctatgtgggttgctgaggat 630 |||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 2229219 aagaaggcggatcacagggagctcttgcgcaagaaaagctctatgtgggttgctgaggat 2229160 Query: 631 aaactggaaaagaaaattctcgaggctatca 661 |||||||||| | |||||| || ||||||| Sbjct: 2229159 aaactggaaacaacaattcttgacgctatca 2229129