BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027j20 (1227 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EF160077.1| Triticum aestivum uroporphyrinogen III synthase (... 640 e-180 ref|NM_001055736.1| Oryza sativa (japonica cultivar-group) Os03g... 549 e-153 dbj|AK107127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 549 e-153 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 170 9e-39 gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 170 9e-39 >gb|EF160077.1| Triticum aestivum uroporphyrinogen III synthase (UROS) mRNA, complete cds Length = 1077 Score = 640 bits (323), Expect = e-180 Identities = 475/525 (90%), Gaps = 3/525 (0%) Strand = Plus / Plus Query: 115 ccgccccgccggaacgtcccgagccggcgcgcccgggaggttcctagcctgc---tcctc 171 ||||||||||||| | ||||||||||||||||||||||| || ||| | || || Sbjct: 93 ccgccccgccggagctccccgagccggcgcgcccgggaggagtctcgccgcccactcgtc 152 Query: 172 tcccccgcccgacgtcgtggtcacgcgcgagcagggcaagaacgccaagctcatcgccgc 231 |||| | |||||||||||||||||||||||||| |||||||||||||||||| ||||| | Sbjct: 153 tccctctcccgacgtcgtggtcacgcgcgagcaaggcaagaacgccaagctcgtcgcctc 212 Query: 232 gctggaaaatcataatgtacaatctctggaacttcctcttattaagcatgccgaaggccc 291 || || || |||||||| || |||||||| |||||||||||| |||| | |||||| || Sbjct: 213 tctagagaagcataatgtgcactctctggagcttcctcttattcagcacgtcgaagggcc 272 Query: 292 tgatacagataggctttcagctgtcttgcgtgatgaaaagtttgactggattactataac 351 |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 273 tgatgcagataggctttcagctgtcttgcgggatgaaaagtttgactggattactgtaac 332 Query: 352 atctcctgaggcagctgcagtgttccttgagcgatggaaggctgctggaagtcctaaggt 411 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 333 atctcctgaggcagctgcagtgttccttgagggatggaaggctgctggaagtcctaaggt 392 Query: 412 gcgaatagcagttgttggagcagggactgcaagaacttttgatgaagtatcgcagtctga 471 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || | Sbjct: 393 gcgaatagcagttgttggagcaggtactgcaagaacttttgatgaagtattgcaatccaa 452 Query: 472 tgatagatcccttgaggttgcattttctccttccaaagctatgggtacagttttggcctc 531 |||| || |||||||||||||||||||||||||||||||| |||| | |||||||||||| Sbjct: 453 tgatggaccccttgaggttgcattttctccttccaaagctttgggcaaagttttggcctc 512 Query: 532 agagcttccaaggaccagtgagactacctgtaaagtgttgtatcctgcatctgcaaaggc 591 |||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 513 ggagcttccaaggactagtgagactgcttctaaagtgttgtatcctgcatctgcaaaggc 572 Query: 592 tggccatgaaattcagaatgggctgtcagatcgagggtttgaggt 636 ||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 573 tggccatgaaattcagaatgggctgtcagctcgaggatttgaggt 617 Score = 214 bits (108), Expect = 6e-52 Identities = 225/264 (85%) Strand = Plus / Plus Query: 635 gtaccagtacaatatgtagacccacaaaatttaaagcttgctctttcagctccagttgtt 694 ||||| ||||| ||||||| ||||| | ||||||||||||||||||||| ||||||||| Sbjct: 643 gtacctgtacatgatgtagaaccacagattttaaagcttgctctttcagcgccagttgtt 702 Query: 695 gcagtagcttctccttccgcactacgagcttggctaaatctcatttcacaagttgacaat 754 |||||||||||||| || ||||| || || |||||||| ||||| |||| || ||||| Sbjct: 703 gcagtagcttctccatctgcactccgggcgtggctaaacctcatgtcacgggtcgacaag 762 Query: 755 tggagcaactccattgcttgcataggcgagacgactgcctcagcagcgaagaaatttggc 814 ||||||||||| | || ||||||||||||||||| || ||||| || |||||| | ||| Sbjct: 763 tggagcaactcggtcgcctgcataggcgagacgacggcatcagcggccaagaaactcggc 822 Query: 815 ctgaagagcatattctatcctacaacccctggacttgaagggtgggttgaaagcattctc 874 ||| ||||| ||| |||||| ||||||||||||| ||||||||||| |||||||| || Sbjct: 823 ctggagagcgtatactatcccgcaacccctggactcgaagggtgggtcgaaagcatcctg 882 Query: 875 gaagccctcagagcccataagcaa 898 ||||| ||||||||||| |||||| Sbjct: 883 gaagcgctcagagcccacaagcaa 906 >ref|NM_001055736.1| Oryza sativa (japonica cultivar-group) Os03g0186100 (Os03g0186100) mRNA, complete cds Length = 1160 Score = 549 bits (277), Expect = e-153 Identities = 450/507 (88%), Gaps = 3/507 (0%) Strand = Plus / Plus Query: 133 ccgagccggcgcgcccgggaggttcctagcctgctcctctcccccgcc---cgacgtcgt 189 |||||||||||| | ||||||||| |||| |||||||| ||||| || ||||||||| Sbjct: 90 ccgagccggcgccacggggaggttcatagcgtgctcctcgccccctcctcccgacgtcgt 149 Query: 190 ggtcacgcgcgagcagggcaagaacgccaagctcatcgccgcgctggaaaatcataatgt 249 |||||| ||||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 150 ggtcacccgcgagcgcgggaagaacgccaagctcatcgccgcgctggaaaaacataatgt 209 Query: 250 acaatctctggaacttcctcttattaagcatgccgaaggccctgatacagataggctttc 309 |||| ||| || |||||||||||||| |||| ||||| || ||||||||||||||||| Sbjct: 210 acaaagtcttgagcttcctcttattaaacatgttgaagggccagatacagataggctttc 269 Query: 310 agctgtcttgcgtgatgaaaagtttgactggattactataacatctcctgaggcagctgc 369 |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 270 tgctgtcctgcgcgatgaaaagtttgactggatcactataacatctcctgaggcagctgc 329 Query: 370 agtgttccttgagcgatggaaggctgctggaagtcctaaggtgcgaatagcagttgttgg 429 |||||||||||| |||||||||||||||||| ||||||||| |||||||| |||||||| Sbjct: 330 tgtgttccttgagggatggaaggctgctggaaatcctaaggtacgaatagcggttgttgg 389 Query: 430 agcagggactgcaagaacttttgatgaagtatcgcagtctgatgatagatcccttgaggt 489 |||||| |||| |||| |||||| |||||| || | ||||| ||||||||||||| Sbjct: 390 agcaggtactgaaagagtttttgacgaagtaattcaatacaatgatggatcccttgaggt 449 Query: 490 tgcattttctccttccaaagctatgggtacagttttggcctcagagcttccaaggaccag 549 ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 450 tgcattttctccttctaaagctatgggtaaatttttggcctcagagcttccaaggaccac 509 Query: 550 tgagactacctgtaaagtgttgtatcctgcatctgcaaaggctggccatgaaattcagaa 609 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 510 tgaaactacttgtaaagtgttatatcctgcatctgcaaaggctggccatgaaatccagaa 569 Query: 610 tgggctgtcagatcgagggtttgaggt 636 |||||| ||| ||||||| |||||||| Sbjct: 570 tgggctatcaaatcgaggatttgaggt 596 Score = 307 bits (155), Expect = 6e-80 Identities = 233/259 (89%) Strand = Plus / Plus Query: 665 ttaaagcttgctctttcagctccagttgttgcagtagcttctccttccgcactacgagct 724 ||||||| ||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 652 ttaaagcctgctctttcagctccagttgttgcagtagcttctccttctgctctccgagct 711 Query: 725 tggctaaatctcatttcacaagttgacaattggagcaactccattgcttgcataggcgag 784 ||||||||||| ||||||||||||||| ||| ||||| ||||||| |||||||||||| Sbjct: 712 tggctaaatcttgcttcacaagttgacaactggggcaacgccattgcctgcataggcgag 771 Query: 785 acgactgcctcagcagcgaagaaatttggcctgaagagcatattctatcctacaacccct 844 ||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| Sbjct: 772 acgactgcctcagcagctaagaaatttggcctgaagagcatatattatcctaccaccccg 831 Query: 845 ggacttgaagggtgggttgaaagcattctcgaagccctcagagcccataagcaatcaaaa 904 |||||||| ||||||||||||||||| || ||||| |||||||||||| |||||| ||| Sbjct: 832 ggacttgacgggtgggttgaaagcatccttgaagcgctcagagcccatgggcaatcgaaa 891 Query: 905 aaggccccaaagtgttgaa 923 |||||||| |||||||| Sbjct: 892 gaggccccagggtgttgaa 910 >dbj|AK107127.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-B12, full insert sequence Length = 1160 Score = 549 bits (277), Expect = e-153 Identities = 450/507 (88%), Gaps = 3/507 (0%) Strand = Plus / Plus Query: 133 ccgagccggcgcgcccgggaggttcctagcctgctcctctcccccgcc---cgacgtcgt 189 |||||||||||| | ||||||||| |||| |||||||| ||||| || ||||||||| Sbjct: 90 ccgagccggcgccacggggaggttcatagcgtgctcctcgccccctcctcccgacgtcgt 149 Query: 190 ggtcacgcgcgagcagggcaagaacgccaagctcatcgccgcgctggaaaatcataatgt 249 |||||| ||||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 150 ggtcacccgcgagcgcgggaagaacgccaagctcatcgccgcgctggaaaaacataatgt 209 Query: 250 acaatctctggaacttcctcttattaagcatgccgaaggccctgatacagataggctttc 309 |||| ||| || |||||||||||||| |||| ||||| || ||||||||||||||||| Sbjct: 210 acaaagtcttgagcttcctcttattaaacatgttgaagggccagatacagataggctttc 269 Query: 310 agctgtcttgcgtgatgaaaagtttgactggattactataacatctcctgaggcagctgc 369 |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 270 tgctgtcctgcgcgatgaaaagtttgactggatcactataacatctcctgaggcagctgc 329 Query: 370 agtgttccttgagcgatggaaggctgctggaagtcctaaggtgcgaatagcagttgttgg 429 |||||||||||| |||||||||||||||||| ||||||||| |||||||| |||||||| Sbjct: 330 tgtgttccttgagggatggaaggctgctggaaatcctaaggtacgaatagcggttgttgg 389 Query: 430 agcagggactgcaagaacttttgatgaagtatcgcagtctgatgatagatcccttgaggt 489 |||||| |||| |||| |||||| |||||| || | ||||| ||||||||||||| Sbjct: 390 agcaggtactgaaagagtttttgacgaagtaattcaatacaatgatggatcccttgaggt 449 Query: 490 tgcattttctccttccaaagctatgggtacagttttggcctcagagcttccaaggaccag 549 ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 450 tgcattttctccttctaaagctatgggtaaatttttggcctcagagcttccaaggaccac 509 Query: 550 tgagactacctgtaaagtgttgtatcctgcatctgcaaaggctggccatgaaattcagaa 609 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 510 tgaaactacttgtaaagtgttatatcctgcatctgcaaaggctggccatgaaatccagaa 569 Query: 610 tgggctgtcagatcgagggtttgaggt 636 |||||| ||| ||||||| |||||||| Sbjct: 570 tgggctatcaaatcgaggatttgaggt 596 Score = 307 bits (155), Expect = 6e-80 Identities = 233/259 (89%) Strand = Plus / Plus Query: 665 ttaaagcttgctctttcagctccagttgttgcagtagcttctccttccgcactacgagct 724 ||||||| ||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 652 ttaaagcctgctctttcagctccagttgttgcagtagcttctccttctgctctccgagct 711 Query: 725 tggctaaatctcatttcacaagttgacaattggagcaactccattgcttgcataggcgag 784 ||||||||||| ||||||||||||||| ||| ||||| ||||||| |||||||||||| Sbjct: 712 tggctaaatcttgcttcacaagttgacaactggggcaacgccattgcctgcataggcgag 771 Query: 785 acgactgcctcagcagcgaagaaatttggcctgaagagcatattctatcctacaacccct 844 ||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| Sbjct: 772 acgactgcctcagcagctaagaaatttggcctgaagagcatatattatcctaccaccccg 831 Query: 845 ggacttgaagggtgggttgaaagcattctcgaagccctcagagcccataagcaatcaaaa 904 |||||||| ||||||||||||||||| || ||||| |||||||||||| |||||| ||| Sbjct: 832 ggacttgacgggtgggttgaaagcatccttgaagcgctcagagcccatgggcaatcgaaa 891 Query: 905 aaggccccaaagtgttgaa 923 |||||||| |||||||| Sbjct: 892 gaggccccagggtgttgaa 910 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 170 bits (86), Expect = 9e-39 Identities = 125/138 (90%) Strand = Plus / Plus Query: 720 gagcttggctaaatctcatttcacaagttgacaattggagcaactccattgcttgcatag 779 |||||||||||||||| ||||||||||||||| ||| ||||| ||||||| ||||||| Sbjct: 4481913 gagcttggctaaatcttgcttcacaagttgacaactggggcaacgccattgcctgcatag 4481972 Query: 780 gcgagacgactgcctcagcagcgaagaaatttggcctgaagagcatattctatcctacaa 839 |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | Sbjct: 4481973 gcgagacgactgcctcagcagctaagaaatttggcctgaagagcatatattatcctacca 4482032 Query: 840 cccctggacttgaagggt 857 |||| |||||||| |||| Sbjct: 4482033 ccccgggacttgacgggt 4482050 Score = 143 bits (72), Expect = 2e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 508 agctatgggtacagttttggcctcagagcttccaaggaccagtgagactacctgtaaagt 567 ||||||||||| | ||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct: 4480807 agctatgggtaaatttttggcctcagagcttccaaggaccactgaaactacttgtaaagt 4480866 Query: 568 gttgtatcctgcatctgcaaaggctggccatgaaat 603 ||| |||||||||||||||||||||||||||||||| Sbjct: 4480867 gttatatcctgcatctgcaaaggctggccatgaaat 4480902 Score = 113 bits (57), Expect = 2e-21 Identities = 66/69 (95%) Strand = Plus / Plus Query: 323 gatgaaaagtttgactggattactataacatctcctgaggcagctgcagtgttccttgag 382 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 4480254 gatgaaaagtttgactggatcactataacatctcctgaggcagctgctgtgttccttgag 4480313 Query: 383 cgatggaag 391 |||||||| Sbjct: 4480314 ggatggaag 4480322 Score = 97.6 bits (49), Expect = 1e-16 Identities = 93/107 (86%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 133 ccgagccggcgcgcccgggaggttcctagcctgctcctctcccccgcc---cgacgtcgt 189 |||||||||||| | ||||||||| |||| |||||||| ||||| || ||||||||| Sbjct: 4478610 ccgagccggcgccacggggaggttcatagcgtgctcctcgccccctcctcccgacgtcgt 4478669 Query: 190 ggtcacgcgcgagcagggcaagaacgccaagctcatcgccgcgctgg 236 |||||| ||||||| || |||||||||||||||||||||||||||| Sbjct: 4478670 ggtcacccgcgagcgcgggaagaacgccaagctcatcgccgcgctgg 4478716 Score = 85.7 bits (43), Expect = 4e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 665 ttaaagcttgctctttcagctccagttgttgcagtagcttctccttc 711 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4481430 ttaaagcctgctctttcagctccagttgttgcagtagcttctccttc 4481476 Score = 77.8 bits (39), Expect = 9e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 235 ggaaaatcataatgtacaatctctggaacttcctcttattaagcatgccgaaggccctga 294 |||||| |||||||||||| ||| || |||||||||||||| |||| ||||| || || Sbjct: 4480002 ggaaaaacataatgtacaaagtcttgagcttcctcttattaaacatgttgaagggccaga 4480061 Query: 295 tacagataggctttcagctgtcttgcg 321 ||||||||||||||| |||||| |||| Sbjct: 4480062 tacagataggctttctgctgtcctgcg 4480088 >gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 170 bits (86), Expect = 9e-39 Identities = 125/138 (90%) Strand = Plus / Plus Query: 720 gagcttggctaaatctcatttcacaagttgacaattggagcaactccattgcttgcatag 779 |||||||||||||||| ||||||||||||||| ||| ||||| ||||||| ||||||| Sbjct: 87090 gagcttggctaaatcttgcttcacaagttgacaactggggcaacgccattgcctgcatag 87149 Query: 780 gcgagacgactgcctcagcagcgaagaaatttggcctgaagagcatattctatcctacaa 839 |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | Sbjct: 87150 gcgagacgactgcctcagcagctaagaaatttggcctgaagagcatatattatcctacca 87209 Query: 840 cccctggacttgaagggt 857 |||| |||||||| |||| Sbjct: 87210 ccccgggacttgacgggt 87227 Score = 143 bits (72), Expect = 2e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 508 agctatgggtacagttttggcctcagagcttccaaggaccagtgagactacctgtaaagt 567 ||||||||||| | ||||||||||||||||||||||||||| ||| ||||| |||||||| Sbjct: 85984 agctatgggtaaatttttggcctcagagcttccaaggaccactgaaactacttgtaaagt 86043 Query: 568 gttgtatcctgcatctgcaaaggctggccatgaaat 603 ||| |||||||||||||||||||||||||||||||| Sbjct: 86044 gttatatcctgcatctgcaaaggctggccatgaaat 86079 Score = 113 bits (57), Expect = 2e-21 Identities = 66/69 (95%) Strand = Plus / Plus Query: 323 gatgaaaagtttgactggattactataacatctcctgaggcagctgcagtgttccttgag 382 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 85431 gatgaaaagtttgactggatcactataacatctcctgaggcagctgctgtgttccttgag 85490 Query: 383 cgatggaag 391 |||||||| Sbjct: 85491 ggatggaag 85499 Score = 97.6 bits (49), Expect = 1e-16 Identities = 93/107 (86%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 133 ccgagccggcgcgcccgggaggttcctagcctgctcctctcccccgcc---cgacgtcgt 189 |||||||||||| | ||||||||| |||| |||||||| ||||| || ||||||||| Sbjct: 83787 ccgagccggcgccacggggaggttcatagcgtgctcctcgccccctcctcccgacgtcgt 83846 Query: 190 ggtcacgcgcgagcagggcaagaacgccaagctcatcgccgcgctgg 236 |||||| ||||||| || |||||||||||||||||||||||||||| Sbjct: 83847 ggtcacccgcgagcgcgggaagaacgccaagctcatcgccgcgctgg 83893 Score = 85.7 bits (43), Expect = 4e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 665 ttaaagcttgctctttcagctccagttgttgcagtagcttctccttc 711 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 86607 ttaaagcctgctctttcagctccagttgttgcagtagcttctccttc 86653 Score = 77.8 bits (39), Expect = 9e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 235 ggaaaatcataatgtacaatctctggaacttcctcttattaagcatgccgaaggccctga 294 |||||| |||||||||||| ||| || |||||||||||||| |||| ||||| || || Sbjct: 85179 ggaaaaacataatgtacaaagtcttgagcttcctcttattaaacatgttgaagggccaga 85238 Query: 295 tacagataggctttcagctgtcttgcg 321 ||||||||||||||| |||||| |||| Sbjct: 85239 tacagataggctttctgctgtcctgcg 85265