BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027j15 (1538 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052712.1| Oryza sativa (japonica cultivar-group) Os02g... 543 e-151 dbj|AK072385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 543 e-151 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 238 6e-59 dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic D... 238 6e-59 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 170 1e-38 >ref|NM_001052712.1| Oryza sativa (japonica cultivar-group) Os02g0194300 (Os02g0194300) mRNA, partial cds Length = 2336 Score = 543 bits (274), Expect = e-151 Identities = 481/550 (87%) Strand = Plus / Plus Query: 387 cagagacctagggagcaaatagctgatgcagaagctctgctggacattgcaaacactttg 446 ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1084 cagaggcctagggagcaaatagctgatgcagaaactctgttggacattgcaaacactttg 1143 Query: 447 gtaacatatgtgaggtcccagtcaagcgaaggagtcacaccttctgattttgtaacagca 506 ||||||| || ||||| |||||||| |||||| |||| || |||||||| |||||||| Sbjct: 1144 gtaacatccgttaggtctcagtcaagtgaaggaatcactccctctgatttcgtaacagcc 1203 Query: 507 ttgctgaagaaatttgggcagcaagggagccttgatgctgagactgtctcgttacgctgg 566 ||||||||||||||||||| |||| |||||||| ||||| ||| ||| || |||||| Sbjct: 1204 atgctgaagaaatttgggcaatcagggggccttgattctgaggctgcctcattgcgctgg 1263 Query: 567 ggtgatgttgggctttctgcctcccatgttttcagggctgtgcctggatgctgcaccatg 626 || |||||||||||||||| |||||||| |||||||||| |||||||||||||| ||| Sbjct: 1264 ggggatgttgggctttctgtgtcccatgtcttcagggctgcacctggatgctgcactatg 1323 Query: 627 cttggacccatgaatacagaagtgaagcagcgcaaggttccagttgtcaatagaaaacga 686 ||||||||||||||||||||||| || || || |||| | |||| |||||||||||| Sbjct: 1324 cttggacccatgaatacagaagtaaaacaacggaaggctgtggttgccaatagaaaacgg 1383 Query: 687 actgccaggccaaccgaaaatacttgtcctgaagagcttgctgattcttcagagggagca 746 ||||| |||||||| |||||| || |||||||| |||||||||| |||| ||||||| | Sbjct: 1384 actgcgaggccaacggaaaatgctcgtcctgaacagcttgctgaatctttggagggagta 1443 Query: 747 aagacagacactgaccggaatgtgtccgttatatttgatatcctgaggaggaagaagagt 806 |||||||||||||| |||||||||| || ||||||||||||||||||||||| || || Sbjct: 1444 aagacagacactgataggaatgtgtctgtcatatttgatatcctgaggaggaataaaagg 1503 Query: 807 gcaaggctggagaaccttgttttgaacagactttcatttgcccaaacggttgagaatatt 866 ||||||||||||||| ||||||||||||| | ||| ||||||||||| |||||||| || Sbjct: 1504 gcaaggctggagaacattgttttgaacaggcgttcttttgcccaaactgttgagaacgtt 1563 Query: 867 tttgcgctgtctttcctagtgaaagatggcagggtggcaatgaacgtagatgacaatggg 926 ||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||||| ||| Sbjct: 1564 tttgcactgtccttcctagttaaagatggcagggtggcaataaacatagatgacaacggg 1623 Query: 927 catcatatag 936 |||||||||| Sbjct: 1624 catcatatag 1633 Score = 184 bits (93), Expect = 7e-43 Identities = 129/141 (91%) Strand = Plus / Plus Query: 940 atccaagaaatgcacctgctgctagtgccatagcctcaggagaagtctcctacaaccatt 999 |||| |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 1739 atcctagaaatgctcctgctgctagtgcgatagcctcaggagaagtctcctacagccatt 1798 Query: 1000 ttgttttcagatttgattttagagactggaagcttatgaaagaggtcgtcgtggatgggg 1059 ||||||||||||||||||| | |||||||||||||||| |||| ||||| ||| |||| Sbjct: 1799 ttgttttcagatttgatttcaaagactggaagcttatgcaagaagtcgttccggacgggg 1858 Query: 1060 aagaactgatgccacacagga 1080 ||||||||||||||||||||| Sbjct: 1859 aagaactgatgccacacagga 1879 Score = 167 bits (84), Expect = 2e-37 Identities = 135/152 (88%) Strand = Plus / Plus Query: 233 gcagcagcagggggtggcggagcggcggttgctccggtcgcggtacctcgctgtgaagaa 292 ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 246 gcagcagcagggggttgcggagcggcggctgctccggtcgcggtacctcgccgtgaagaa 305 Query: 293 cctcatcatcgatgagaagggggaaatggcgaaggcggattccgacaagttcgcagccgt 352 ||||||| ||||||||||| || ||||||| ||||| ||||||| |||||| ||| | Sbjct: 306 tctcatcagcgatgagaaggatgacatggcgagggcgggctccgacacgttcgccgccat 365 Query: 353 catcacgcaggtggagagcttgcacgagctcg 384 ||||||||||||||| || |||||||||||| Sbjct: 366 catcacgcaggtggactgcctgcacgagctcg 397 >dbj|AK072385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080M13, full insert sequence Length = 2336 Score = 543 bits (274), Expect = e-151 Identities = 481/550 (87%) Strand = Plus / Plus Query: 387 cagagacctagggagcaaatagctgatgcagaagctctgctggacattgcaaacactttg 446 ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1085 cagaggcctagggagcaaatagctgatgcagaaactctgttggacattgcaaacactttg 1144 Query: 447 gtaacatatgtgaggtcccagtcaagcgaaggagtcacaccttctgattttgtaacagca 506 ||||||| || ||||| |||||||| |||||| |||| || |||||||| |||||||| Sbjct: 1145 gtaacatccgttaggtctcagtcaagtgaaggaatcactccctctgatttcgtaacagcc 1204 Query: 507 ttgctgaagaaatttgggcagcaagggagccttgatgctgagactgtctcgttacgctgg 566 ||||||||||||||||||| |||| |||||||| ||||| ||| ||| || |||||| Sbjct: 1205 atgctgaagaaatttgggcaatcagggggccttgattctgaggctgcctcattgcgctgg 1264 Query: 567 ggtgatgttgggctttctgcctcccatgttttcagggctgtgcctggatgctgcaccatg 626 || |||||||||||||||| |||||||| |||||||||| |||||||||||||| ||| Sbjct: 1265 ggggatgttgggctttctgtgtcccatgtcttcagggctgcacctggatgctgcactatg 1324 Query: 627 cttggacccatgaatacagaagtgaagcagcgcaaggttccagttgtcaatagaaaacga 686 ||||||||||||||||||||||| || || || |||| | |||| |||||||||||| Sbjct: 1325 cttggacccatgaatacagaagtaaaacaacggaaggctgtggttgccaatagaaaacgg 1384 Query: 687 actgccaggccaaccgaaaatacttgtcctgaagagcttgctgattcttcagagggagca 746 ||||| |||||||| |||||| || |||||||| |||||||||| |||| ||||||| | Sbjct: 1385 actgcgaggccaacggaaaatgctcgtcctgaacagcttgctgaatctttggagggagta 1444 Query: 747 aagacagacactgaccggaatgtgtccgttatatttgatatcctgaggaggaagaagagt 806 |||||||||||||| |||||||||| || ||||||||||||||||||||||| || || Sbjct: 1445 aagacagacactgataggaatgtgtctgtcatatttgatatcctgaggaggaataaaagg 1504 Query: 807 gcaaggctggagaaccttgttttgaacagactttcatttgcccaaacggttgagaatatt 866 ||||||||||||||| ||||||||||||| | ||| ||||||||||| |||||||| || Sbjct: 1505 gcaaggctggagaacattgttttgaacaggcgttcttttgcccaaactgttgagaacgtt 1564 Query: 867 tttgcgctgtctttcctagtgaaagatggcagggtggcaatgaacgtagatgacaatggg 926 ||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||||| ||| Sbjct: 1565 tttgcactgtccttcctagttaaagatggcagggtggcaataaacatagatgacaacggg 1624 Query: 927 catcatatag 936 |||||||||| Sbjct: 1625 catcatatag 1634 Score = 184 bits (93), Expect = 7e-43 Identities = 129/141 (91%) Strand = Plus / Plus Query: 940 atccaagaaatgcacctgctgctagtgccatagcctcaggagaagtctcctacaaccatt 999 |||| |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 1740 atcctagaaatgctcctgctgctagtgcgatagcctcaggagaagtctcctacagccatt 1799 Query: 1000 ttgttttcagatttgattttagagactggaagcttatgaaagaggtcgtcgtggatgggg 1059 ||||||||||||||||||| | |||||||||||||||| |||| ||||| ||| |||| Sbjct: 1800 ttgttttcagatttgatttcaaagactggaagcttatgcaagaagtcgttccggacgggg 1859 Query: 1060 aagaactgatgccacacagga 1080 ||||||||||||||||||||| Sbjct: 1860 aagaactgatgccacacagga 1880 Score = 167 bits (84), Expect = 2e-37 Identities = 135/152 (88%) Strand = Plus / Plus Query: 233 gcagcagcagggggtggcggagcggcggttgctccggtcgcggtacctcgctgtgaagaa 292 ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 247 gcagcagcagggggttgcggagcggcggctgctccggtcgcggtacctcgccgtgaagaa 306 Query: 293 cctcatcatcgatgagaagggggaaatggcgaaggcggattccgacaagttcgcagccgt 352 ||||||| ||||||||||| || ||||||| ||||| ||||||| |||||| ||| | Sbjct: 307 tctcatcagcgatgagaaggatgacatggcgagggcgggctccgacacgttcgccgccat 366 Query: 353 catcacgcaggtggagagcttgcacgagctcg 384 ||||||||||||||| || |||||||||||| Sbjct: 367 catcacgcaggtggactgcctgcacgagctcg 398 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 238 bits (120), Expect = 6e-59 Identities = 192/216 (88%) Strand = Plus / Minus Query: 721 agcttgctgattcttcagagggagcaaagacagacactgaccggaatgtgtccgttatat 780 |||||||||| |||| ||||||| ||||||||||||||| |||||||||| || |||| Sbjct: 5255503 agcttgctgaatctttggagggagtaaagacagacactgataggaatgtgtctgtcatat 5255444 Query: 781 ttgatatcctgaggaggaagaagagtgcaaggctggagaaccttgttttgaacagacttt 840 ||||||||||||||||||| || || ||||||||||||||| ||||||||||||| | || Sbjct: 5255443 ttgatatcctgaggaggaataaaagggcaaggctggagaacattgttttgaacaggcgtt 5255384 Query: 841 catttgcccaaacggttgagaatatttttgcgctgtctttcctagtgaaagatggcaggg 900 | ||||||||||| |||||||| ||||||| ||||| |||||||| ||||||||||||| Sbjct: 5255383 cttttgcccaaactgttgagaacgtttttgcactgtccttcctagttaaagatggcaggg 5255324 Query: 901 tggcaatgaacgtagatgacaatgggcatcatatag 936 ||||||| ||| |||||||||| ||||||||||||| Sbjct: 5255323 tggcaataaacatagatgacaacgggcatcatatag 5255288 Score = 238 bits (120), Expect = 6e-59 Identities = 207/236 (87%) Strand = Plus / Minus Query: 387 cagagacctagggagcaaatagctgatgcagaagctctgctggacattgcaaacactttg 446 ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 5256413 cagaggcctagggagcaaatagctgatgcagaaactctgttggacattgcaaacactttg 5256354 Query: 447 gtaacatatgtgaggtcccagtcaagcgaaggagtcacaccttctgattttgtaacagca 506 ||||||| || ||||| |||||||| |||||| |||| || |||||||| |||||||| Sbjct: 5256353 gtaacatccgttaggtctcagtcaagtgaaggaatcactccctctgatttcgtaacagcc 5256294 Query: 507 ttgctgaagaaatttgggcagcaagggagccttgatgctgagactgtctcgttacgctgg 566 ||||||||||||||||||| |||| |||||||| ||||| ||| ||| || |||||| Sbjct: 5256293 atgctgaagaaatttgggcaatcagggggccttgattctgaggctgcctcattgcgctgg 5256234 Query: 567 ggtgatgttgggctttctgcctcccatgttttcagggctgtgcctggatgctgcac 622 || |||||||||||||||| |||||||| |||||||||| |||||||||||||| Sbjct: 5256233 ggggatgttgggctttctgtgtcccatgtcttcagggctgcacctggatgctgcac 5256178 Score = 135 bits (68), Expect = 6e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 940 atccaagaaatgcacctgctgctagtgccatagcctcaggagaagtctcctacaaccatt 999 |||| |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 5255182 atcctagaaatgctcctgctgctagtgcgatagcctcaggagaagtctcctacagccatt 5255123 Query: 1000 ttgttttcagatttgattttagagactggaag 1031 ||||||||||||||||||| | |||||||||| Sbjct: 5255122 ttgttttcagatttgatttcaaagactggaag 5255091 Score = 103 bits (52), Expect = 2e-18 Identities = 64/68 (94%) Strand = Plus / Minus Query: 233 gcagcagcagggggtggcggagcggcggttgctccggtcgcggtacctcgctgtgaagaa 292 ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 5257348 gcagcagcagggggttgcggagcggcggctgctccggtcgcggtacctcgccgtgaagaa 5257289 Query: 293 cctcatca 300 ||||||| Sbjct: 5257288 tctcatca 5257281 >dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 238 bits (120), Expect = 6e-59 Identities = 192/216 (88%) Strand = Plus / Minus Query: 721 agcttgctgattcttcagagggagcaaagacagacactgaccggaatgtgtccgttatat 780 |||||||||| |||| ||||||| ||||||||||||||| |||||||||| || |||| Sbjct: 148956 agcttgctgaatctttggagggagtaaagacagacactgataggaatgtgtctgtcatat 148897 Query: 781 ttgatatcctgaggaggaagaagagtgcaaggctggagaaccttgttttgaacagacttt 840 ||||||||||||||||||| || || ||||||||||||||| ||||||||||||| | || Sbjct: 148896 ttgatatcctgaggaggaataaaagggcaaggctggagaacattgttttgaacaggcgtt 148837 Query: 841 catttgcccaaacggttgagaatatttttgcgctgtctttcctagtgaaagatggcaggg 900 | ||||||||||| |||||||| ||||||| ||||| |||||||| ||||||||||||| Sbjct: 148836 cttttgcccaaactgttgagaacgtttttgcactgtccttcctagttaaagatggcaggg 148777 Query: 901 tggcaatgaacgtagatgacaatgggcatcatatag 936 ||||||| ||| |||||||||| ||||||||||||| Sbjct: 148776 tggcaataaacatagatgacaacgggcatcatatag 148741 Score = 238 bits (120), Expect = 6e-59 Identities = 207/236 (87%) Strand = Plus / Minus Query: 387 cagagacctagggagcaaatagctgatgcagaagctctgctggacattgcaaacactttg 446 ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 149866 cagaggcctagggagcaaatagctgatgcagaaactctgttggacattgcaaacactttg 149807 Query: 447 gtaacatatgtgaggtcccagtcaagcgaaggagtcacaccttctgattttgtaacagca 506 ||||||| || ||||| |||||||| |||||| |||| || |||||||| |||||||| Sbjct: 149806 gtaacatccgttaggtctcagtcaagtgaaggaatcactccctctgatttcgtaacagcc 149747 Query: 507 ttgctgaagaaatttgggcagcaagggagccttgatgctgagactgtctcgttacgctgg 566 ||||||||||||||||||| |||| |||||||| ||||| ||| ||| || |||||| Sbjct: 149746 atgctgaagaaatttgggcaatcagggggccttgattctgaggctgcctcattgcgctgg 149687 Query: 567 ggtgatgttgggctttctgcctcccatgttttcagggctgtgcctggatgctgcac 622 || |||||||||||||||| |||||||| |||||||||| |||||||||||||| Sbjct: 149686 ggggatgttgggctttctgtgtcccatgtcttcagggctgcacctggatgctgcac 149631 Score = 135 bits (68), Expect = 6e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 940 atccaagaaatgcacctgctgctagtgccatagcctcaggagaagtctcctacaaccatt 999 |||| |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 148635 atcctagaaatgctcctgctgctagtgcgatagcctcaggagaagtctcctacagccatt 148576 Query: 1000 ttgttttcagatttgattttagagactggaag 1031 ||||||||||||||||||| | |||||||||| Sbjct: 148575 ttgttttcagatttgatttcaaagactggaag 148544 Score = 103 bits (52), Expect = 2e-18 Identities = 64/68 (94%) Strand = Plus / Minus Query: 233 gcagcagcagggggtggcggagcggcggttgctccggtcgcggtacctcgctgtgaagaa 292 ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 150801 gcagcagcagggggttgcggagcggcggctgctccggtcgcggtacctcgccgtgaagaa 150742 Query: 293 cctcatca 300 ||||||| Sbjct: 150741 tctcatca 150734 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 170 bits (86), Expect = 1e-38 Identities = 202/238 (84%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 387 cagagacctagggagcaaatagctgatgcagaagctctgctggacattgcaaaca-cttt 445 ||||| |||| |||||||||||||||||| ||||| ||| ||||||||||||| | |||| Sbjct: 28177129 cagaggcctacggagcaaatagctgatgcggaagccctgttggacattgcaaaaaacttt 28177070 Query: 446 ggtaacatatgtgaggtcccagtcaagcgaaggagtcacaccttctgattttgtaacagc 505 |||||||| ||||||||| |||||||| |||||| |||| || |||||||| |||||||| Sbjct: 28177069 ggtaacatctgtgaggtctcagtcaagtgaaggaatcactccctctgatttcgtaacagc 28177010 Query: 506 attgctgaagaaattt-gggcagcaagggagccttgatgctgagactgtctcgttacgct 564 | ||||||||||||| ||||| |||| ||||||| ||||| ||| || || |||| Sbjct: 28177009 aacgctgaagaaatttggggcaatcagggggccttgaatctgaggctgcttcattgcgct 28176950 Query: 565 ggggtgatgttgggctttctgcctcccatgttttcagggctgtgcctggatgctgcac 622 |||| |||||||||||||||| ||||||| ||||||||| |||||||||||||| Sbjct: 28176949 ggggcgatgttgggctttctgtgccccatgtcttcagggcttcacctggatgctgcac 28176892 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Minus Query: 628 ttggacccatgaatacagaagtgaagcagcgcaaggttccagttgtcaatagaaaacgaa 687 |||||||||||||||||||||| |||||||| ||| | | |||||||||| |||| ||| Sbjct: 28176789 ttggacccatgaatacagaagtaaagcagcggaagactgcggttgtcaatacaaaatgaa 28176730 Query: 688 ctgccaggccaaccgaaaatacttgtcctgaa 719 | || |||||||||||||||| | |||||||| Sbjct: 28176729 ccgcgaggccaaccgaaaatattcgtcctgaa 28176698