BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027i16 (936 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:... 609 e-171 ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g... 605 e-169 gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein... 605 e-169 dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 605 e-169 gb|AF093632.1|AF093632 Oryza sativa high mobility group protein ... 603 e-169 >emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120M18, full insert sequence Length = 994 Score = 609 bits (307), Expect = e-171 Identities = 447/493 (90%), Gaps = 3/493 (0%) Strand = Plus / Plus Query: 152 cgcaggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagt 211 ||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||| Sbjct: 211 cgcaggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagt 270 Query: 212 tggcggtgaatagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccg 271 |||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 271 tggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccg 330 Query: 272 ggaaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagt 331 | |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||| Sbjct: 331 gcaaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagt 390 Query: 332 tccgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaag 391 |||| ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||| Sbjct: 391 tccgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaag 450 Query: 392 cagccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaagg 451 ||||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||| Sbjct: 451 cagccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaagg 510 Query: 452 ccaataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagca 511 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 ccaacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagca 570 Query: 512 ctgccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgaca 571 ||||||||||| || || |||||||||||||||||||| ||||| || |||||||||| Sbjct: 571 ctgccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgaca 627 Query: 572 aatccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaacatgatgaagatg 631 | |||||||||||||| ||||| ||||| ||||| ||||| |||||| | |||||||| | Sbjct: 628 agtccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacg 687 Query: 632 atgacgagtgagc 644 ||||||||||||| Sbjct: 688 atgacgagtgagc 700 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 733 tctaccagaattattcagtttcacttcacatcgttatgttttactttta---tcgtccta 789 ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 782 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 841 Query: 790 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 845 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 842 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 901 Query: 846 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 904 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 902 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 961 Query: 905 ttgcgataatatcagtttgggtatgttagatt 936 ||| ||||||||||||||| |||||||||||| Sbjct: 962 ttgtgataatatcagtttgcgtatgttagatt 993 >ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g0728000 (Os06g0728000) mRNA, complete cds Length = 913 Score = 605 bits (305), Expect = e-169 Identities = 445/491 (90%), Gaps = 3/491 (0%) Strand = Plus / Plus Query: 154 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 213 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 136 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 195 Query: 214 gcggtgaatagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 273 || ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 255 Query: 274 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 333 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 256 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 315 Query: 334 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 393 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 316 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 375 Query: 394 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 453 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 376 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 435 Query: 454 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 513 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 495 Query: 514 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 573 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 496 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 552 Query: 574 tccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaacatgatgaagatgat 633 |||||||||||||| ||||| ||||| ||||| ||||| |||||| | |||||||| ||| Sbjct: 553 tccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgat 612 Query: 634 gacgagtgagc 644 ||||||||||| Sbjct: 613 gacgagtgagc 623 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 733 tctaccagaattattcagtttcacttcacatcgttatgttttactttta---tcgtccta 789 ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 790 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 845 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 846 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 904 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 905 ttgcgataatatcagtttgggtatgttagatt 936 ||| ||||||||||||||| |||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagatt 913 >gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA, complete cds Length = 918 Score = 605 bits (305), Expect = e-169 Identities = 445/491 (90%), Gaps = 3/491 (0%) Strand = Plus / Plus Query: 154 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 213 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 112 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 171 Query: 214 gcggtgaatagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 273 || ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 231 Query: 274 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 333 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 232 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 291 Query: 334 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 393 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 292 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 351 Query: 394 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 453 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 352 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 411 Query: 454 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 513 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 471 Query: 514 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 573 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 472 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 528 Query: 574 tccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaacatgatgaagatgat 633 |||||||||||||| ||||| ||||| ||||| ||||| |||||| | |||||||| ||| Sbjct: 529 tccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgat 588 Query: 634 gacgagtgagc 644 ||||||||||| Sbjct: 589 gacgagtgagc 599 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 733 tctaccagaattattcagtttcacttcacatcgttatgttttactttta---tcgtccta 789 ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 678 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 737 Query: 790 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 845 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 738 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 797 Query: 846 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 904 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 798 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 857 Query: 905 ttgcgataatatcagtttgggtatgttagatt 936 ||| ||||||||||||||| |||||||||||| Sbjct: 858 ttgtgataatatcagtttgcgtatgttagatt 889 >dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full insert sequence Length = 913 Score = 605 bits (305), Expect = e-169 Identities = 445/491 (90%), Gaps = 3/491 (0%) Strand = Plus / Plus Query: 154 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 213 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 136 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 195 Query: 214 gcggtgaatagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 273 || ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 255 Query: 274 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 333 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 256 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 315 Query: 334 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 393 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 316 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 375 Query: 394 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 453 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 376 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 435 Query: 454 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 513 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 495 Query: 514 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 573 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 496 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 552 Query: 574 tccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaacatgatgaagatgat 633 |||||||||||||| ||||| ||||| ||||| ||||| |||||| | |||||||| ||| Sbjct: 553 tccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgat 612 Query: 634 gacgagtgagc 644 ||||||||||| Sbjct: 613 gacgagtgagc 623 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 733 tctaccagaattattcagtttcacttcacatcgttatgttttactttta---tcgtccta 789 ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 790 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 845 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 846 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 904 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 905 ttgcgataatatcagtttgggtatgttagatt 936 ||| ||||||||||||||| |||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagatt 913 >gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds Length = 869 Score = 603 bits (304), Expect = e-169 Identities = 444/490 (90%), Gaps = 3/490 (0%) Strand = Plus / Plus Query: 155 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 214 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 64 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 123 Query: 215 cggtgaatagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 274 | ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 124 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 183 Query: 275 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 334 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 184 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 243 Query: 335 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 394 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 244 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 303 Query: 395 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 454 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 304 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 363 Query: 455 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 514 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 423 Query: 515 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaat 574 |||||||| || || |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 424 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 480 Query: 575 ccaagtccgaggtgaatgacgaggacgacgatgagggtagcgaacatgatgaagatgatg 634 ||||||||||||| ||||| ||||| ||||| ||||| |||||| | |||||||| |||| Sbjct: 481 ccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgatg 540 Query: 635 acgagtgagc 644 |||||||||| Sbjct: 541 acgagtgagc 550 Score = 214 bits (108), Expect = 5e-52 Identities = 189/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 733 tctaccagaattattcagtttcacttcacatcgttatgttttactttta---tcgtccta 789 ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 629 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 688 Query: 790 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 845 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 689 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 748 Query: 846 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 904 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 749 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 808 Query: 905 ttgcgataatatcagtttgggtatgttagatt 936 ||| ||||||||||||||| |||||||||||| Sbjct: 809 ttgtgataatatcagtttgcgtatgttagatt 840