BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027i02 (927 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ317422.1| Lithachne humilis KNOTTED1 homeodomain protein (K... 910 0.0 gb|AF224499.1|AF224499 Triticum aestivum KNOTTED-1-like homeobox... 803 0.0 gb|AF224500.1|AF224500 Triticum aestivum KNOTTED-1-like homeobox... 787 0.0 dbj|D16507.1|RICOSH1 Oryza sativa (japonica cultivar-group) OSH1... 787 0.0 gb|AF224498.1|AF224498 Triticum aestivum KNOTTED-1-like homeobox... 771 0.0 >gb|DQ317422.1| Lithachne humilis KNOTTED1 homeodomain protein (KN1) mRNA, partial cds Length = 1050 Score = 910 bits (459), Expect = 0.0 Identities = 602/649 (92%), Gaps = 3/649 (0%) Strand = Plus / Plus Query: 279 gccggcctgccgcacaccccgctcaccctgaacacggcgcccactactggaaacaacggc 338 |||||| ||||| |||||||||| ||||||||||||||||||||| | || ||| || Sbjct: 124 gccggcatgccgaacaccccgcttaccctgaacacggcgcccactccggggggcaatgga 183 Query: 339 agcggtagcggcggcggcaacccggtgctgcagctagccaacggcagcctgctggacgcg 398 ||||| ||| |||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 184 ggcggt---ggctgcggcaaccccgtgctgcagctggccaacggcagcctcctggacgcc 240 Query: 399 tgcgccaaggcgaaggagccctcggcgccgtcgtcgtcatacgccgccgacgtcgaggcc 458 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 tgcgccaaggcgaaggagccctcggcgccgtcgtcgtcctacgccgccgacgtcgaggcc 300 Query: 459 atcaaggccaagatcatctcccacccccactactcctccctcctcgccgcttacctcgac 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atcaaggccaagatcatctcccacccccactactcctccctcctcgccgcttacctcgac 360 Query: 519 tgccagaaggtgggggccccgccggaggtggcagcgaggctgacggcggtggcgcaggac 578 ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 361 tgccagaaggtgggggcgccgccggaggtggcggcgaggctgacggcgttggcgcaggac 420 Query: 579 ctgaagctgcggcagcgcacgtcgctcagcggcctcggcgccgcgacggagccggagctg 638 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 421 ctggagctgcggcagcgcacgtcgctcagcggcctcggcgccgcgacggagccggagttg 480 Query: 639 gaccagttcatggaggcgtaccatgagatgctggttaagtaccgggaggagctaacgagg 698 |||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| Sbjct: 481 gaccagttcatggaggcgtaccatgagatgctaatgaagtaccgggaggagctgacgaga 540 Query: 699 ccgctgcaggaggcgatggagttcctgaggagggtggagtcgcagctcaactcgctctcc 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 ccgctgcaggaggcgatggagttcctgaggagggtggagtcgcagctcaactcgctctcc 600 Query: 759 atctccggcagatcgctgcgcaatatcctttcctccggctcttctgaggaggaccaggaa 818 ||||||||||| |||||||||||||||| |||||||| |||||||||||||| || ||| Sbjct: 601 atctccggcaggccgctgcgcaatatcctctcctccggttcttctgaggaggatcaagaa 660 Query: 819 gggagcggaggagagacagagctccctgagattgatgcacacggtgtggaccaggagctc 878 || || ||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||| Sbjct: 661 ggcagtggaggagagacggagctcccagaggttgatgcacacggtgtggaccaggaactc 720 Query: 879 aagcaccatctcctgaagaagtacagtggctacctgagctcactcaagc 927 |||||||| ||||||| |||||||||||| || |||||||| ||||||| Sbjct: 721 aagcaccagctcctgaggaagtacagtgggtatctgagctccctcaagc 769 Score = 97.6 bits (49), Expect = 8e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 216 caccaccacccatgggggtcttccctcagcgccgtggttgcaccgccgccgcagccgctg 275 ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| | | Sbjct: 49 caccaccacccatggggatcttccctcagcgccgtggttgcacccccaccgcagccaccg 108 Query: 276 tccgccggc 284 ||||||||| Sbjct: 109 tccgccggc 117 >gb|AF224499.1|AF224499 Triticum aestivum KNOTTED-1-like homeobox protein b (knox1b) mRNA, complete cds Length = 1499 Score = 803 bits (405), Expect = 0.0 Identities = 583/642 (90%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 289 cgcacaccccgctcaccctgaacacggcgcccactactggaaacaacggcagcggtagcg 348 |||||| ||| ||| |||||||||||||||| | | ||||| | ||||| |||| |||| Sbjct: 247 cgcacagccccctctccctgaacacggcgccgcccagtggaagccacggcggcggcagcg 306 Query: 349 gcggcggcaacccggtgctgcagctagccaacggcagcctgctggacgcgtgcgccaagg 408 | | ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 307 ggtgtagcaacccggtgctgcagctggccaacggcagcctcctggaggcgtgcgccaagg 366 Query: 409 cg---aaggagccctcggcgccgtcgtcgtcatacgccgccgacgtcgaggccatcaagg 465 || |||||||| ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 367 cggccaaggagccgtcg------tcgtcgtcctacgccgccgacgtcgaggccatcaagg 420 Query: 466 ccaagatcatctcccacccccactactcctccctcctcgccgcttacctcgactgccaga 525 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 421 ccaagatcatctcccacccccactactcctccctcctcgccgcctacctcgactgccaga 480 Query: 526 aggtgggggccccgccggaggtggcagcgaggctgacggcggtggcgcaggacctgaagc 585 |||||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct: 481 aggtgggggcgccgccggaggtgttggcgagattgacggcggtggcgcaggacctggagc 540 Query: 586 tgcggcagcgcacgtcgctcagcggcctcggcgccgcgacggagccggagctggaccagt 645 |||| ||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 541 tgcgacagcgcacggcgctcggcagcctcggcaccgcgacggagccggagctggaccagt 600 Query: 646 tcatggaggcgtaccatgagatgctggttaagtaccgggaggagctaacgaggccgctgc 705 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 601 tcatggaggcgtaccatgagatgctggtgaagtaccgggaggagctgacgaggccgctgc 660 Query: 706 aggaggcgatggagttcctgaggagggtggagtcgcagctcaactcgctctccatctccg 765 ||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 661 aggaggccatggagttcctgaggagggtggagacgcaactcaactccctctccatctccg 720 Query: 766 gcagatcgctgcgcaatatcctttcctccggctcttctgaggaggaccaggaagggagcg 825 |||||||||||||||||||||||||||||||||| |||||||| || || ||||| |||| Sbjct: 721 gcagatcgctgcgcaatatcctttcctccggctcatctgaggaagatcaagaaggtagcg 780 Query: 826 gaggagagacagagctccctgagattgatgcacacggtgtggaccaggagctcaagcacc 885 |||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 781 gaggagagacagagcttcctgagattgatgcccacggcgtggaccaggagctgaagcacc 840 Query: 886 atctcctgaagaagtacagtggctacctgagctcactcaagc 927 |||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 841 atctcctgaagaagtacagtgggtacctgagctccctcaagc 882 >gb|AF224500.1|AF224500 Triticum aestivum KNOTTED-1-like homeobox protein d (knox1d) mRNA, complete cds Length = 1531 Score = 787 bits (397), Expect = 0.0 Identities = 575/634 (90%), Gaps = 9/634 (1%) Strand = Plus / Plus Query: 289 cgcacaccccgctcaccctgaacacggcgcccactactggaaacaacggcagcggtagcg 348 |||||| ||| ||| |||||||||||||||| | | ||||| | ||||| |||| |||| Sbjct: 247 cgcacagccccctctccctgaacacggcgccgcccagtggaagccacggcggcggcagcg 306 Query: 349 gcggcggcaacccggtgctgcagctagccaacggcagcctgctggacgcgtgcgccaagg 408 | | ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 307 ggtgtagcaacccggtgctgcagctggccaacggcagcctcctggaggcgtgcgccaagg 366 Query: 409 cg---aaggagccctcggcgccgtcgtcgtcatacgccgccgacgtcgaggccatcaagg 465 || |||||||| ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 367 cggccaaggagccgtcg------tcgtcgtcctacgccgccgacgtcgaggccatcaagg 420 Query: 466 ccaagatcatctcccacccccactactcctccctcctcgccgcttacctcgactgccaga 525 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 421 ccaagatcatctcccacccccactactcctccctcctcgccgcctacctcgactgccaga 480 Query: 526 aggtgggggccccgccggaggtggcagcgaggctgacggcggtggcgcaggacctgaagc 585 |||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 481 aggtgggggcgccgccggaggtgttggcgaggctgacggcggtggcgcaggacctggagc 540 Query: 586 tgcggcagcgcacgtcgctcagcggcctcggcgccgcgacggagccggagctggaccagt 645 || | ||||||||| ||||| || |||||||| ||||||||||||||||| ||||||||| Sbjct: 541 tgagacagcgcacggcgctcggcagcctcggcaccgcgacggagccggagttggaccagt 600 Query: 646 tcatggaggcgtaccatgagatgctggttaagtaccgggaggagctaacgaggccgctgc 705 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 601 tcatggaggcgtaccatgagatgctggtgaagtaccgggaggagctgacgaggccgctgc 660 Query: 706 aggaggcgatggagttcctgaggagggtggagtcgcagctcaactcgctctccatctccg 765 ||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 661 aggaggccatggagttcctgaggagggtggagacgcaactcaactccctctccatctccg 720 Query: 766 gcagatcgctgcgcaatatcctttcctccggctcttctgaggaggaccaggaagggagcg 825 ||||||||||||||||||||||||||||||||||||| ||||| || || ||||| |||| Sbjct: 721 gcagatcgctgcgcaatatcctttcctccggctcttccgaggaagatcaagaaggcagcg 780 Query: 826 gaggagagacagagctccctgagattgatgcacacggtgtggaccaggagctcaagcacc 885 |||| ||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 781 gaggggagacagagcttcctgagattgatgcccacggcgtggaccaggagctgaagcacc 840 Query: 886 atctcctgaagaagtacagtggctacctgagctc 919 |||||||||||||||||||||| ||||||||||| Sbjct: 841 atctcctgaagaagtacagtgggtacctgagctc 874 >dbj|D16507.1|RICOSH1 Oryza sativa (japonica cultivar-group) OSH1 gene for homeobox protein Length = 2598 Score = 787 bits (397), Expect = 0.0 Identities = 525/567 (92%), Gaps = 3/567 (0%) Strand = Plus / Plus Query: 353 cggcaacccggtgctgcagctagccaacggcagcctgctggacgcgtgcgccaaggcgaa 412 ||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||| Sbjct: 1271 cggcaacccggtgctgcagctggcgaacggcagcctgctcgacgcgtgcggcaaggcgaa 1330 Query: 413 ggagccctcggcgccgtcgtcgtcatacgccgccgacgtcgaggccatcaaggccaagat 472 |||| | |||||| || |||||| |||| ||||||| |||||||||||||||||||| Sbjct: 1331 ggaggcgtcggcgtcggcgtcgt---acgcgcccgacgtggaggccatcaaggccaagat 1387 Query: 473 catctcccacccccactactcctccctcctcgccgcttacctcgactgccagaaggtggg 532 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1388 catctcccacccccactactcctccctcctcgccgcctacctcgactgccagaaggttgg 1447 Query: 533 ggccccgccggaggtggcagcgaggctgacggcggtggcgcaggacctgaagctgcggca 592 ||| |||||||||||||| |||||||||||||||||||||||||||||| |||| || || Sbjct: 1448 ggcgccgccggaggtggcggcgaggctgacggcggtggcgcaggacctggagcttcgcca 1507 Query: 593 gcgcacgtcgctcagcggcctcggcgccgcgacggagccggagctggaccagttcatgga 652 ||||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1508 gcgcacggcgctcggcgtcctcggcgccgccacggagccggagctggaccagttcatgga 1567 Query: 653 ggcgtaccatgagatgctggttaagtaccgggaggagctaacgaggccgctgcaggaggc 712 ||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||||||| Sbjct: 1568 ggcgtaccacgagatgctggtgaagtacagggaggagctgacgaggccgctgcaggaggc 1627 Query: 713 gatggagttcctgaggagggtggagtcgcagctcaactcgctctccatctccggcagatc 772 ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 1628 catggagttcttgaggagggtggagacgcagctcaacacgctctccatctccggcagatc 1687 Query: 773 gctgcgcaatatcctttcctccggctcttctgaggaggaccaggaagggagcggaggaga 832 ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 1688 gcttcgcaatatcctttcctccggctcttctgaggaggaccaagaaggtagcggaggaga 1747 Query: 833 gacagagctccctgagattgatgcacacggtgtggaccaggagctcaagcaccatctcct 892 ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| | || Sbjct: 1748 gacagagctacctgagattgatgcacatggtgtggatcaggagctcaagcaccatttgct 1807 Query: 893 gaagaagtacagtggctacctgagctc 919 ||||||||||||||| ||||||||||| Sbjct: 1808 gaagaagtacagtggatacctgagctc 1834 >gb|AF224498.1|AF224498 Triticum aestivum KNOTTED-1-like homeobox protein a (knox1a) mRNA, complete cds Length = 1520 Score = 771 bits (389), Expect = 0.0 Identities = 573/634 (90%), Gaps = 9/634 (1%) Strand = Plus / Plus Query: 289 cgcacaccccgctcaccctgaacacggcgcccactactggaaacaacggcagcggtagcg 348 |||||| ||| ||| |||||||||||||||| | | ||||| | ||||| |||| | || Sbjct: 244 cgcacagccctctctccctgaacacggcgccgcccagtggaagccacggcggcggcaccg 303 Query: 349 gcggcggcaacccggtgctgcagctagccaacggcagcctgctggacgcgtgcgccaagg 408 | | ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 304 ggtgtagcaacccggtgctgcagctggccaacggcagcctcctggaggcgtgcgccaagg 363 Query: 409 cg---aaggagccctcggcgccgtcgtcgtcatacgccgccgacgtcgaggccatcaagg 465 || |||||||| ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 364 cggccaaggagccatcg------tcgtcgtcctacgccgccgacgtcgaggccatcaagg 417 Query: 466 ccaagatcatctcccacccccactactcctccctcctcgccgcttacctcgactgccaga 525 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 418 ccaagatcatctcccacccccactactcctccctcctcgccgcctaccttgactgccaga 477 Query: 526 aggtgggggccccgccggaggtggcagcgaggctgacggcggtggcgcaggacctgaagc 585 |||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 478 aggtgggggcgccgccggaggtgttggcgaggctgacggcggtggcgcaggacctggagc 537 Query: 586 tgcggcagcgcacgtcgctcagcggcctcggcgccgcgacggagccggagctggaccagt 645 || | ||||||||| ||||| || || ||||| ||||||||||||||||| ||||||||| Sbjct: 538 tgagacagcgcacggcgctcggcagcttcggcaccgcgacggagccggagttggaccagt 597 Query: 646 tcatggaggcgtaccatgagatgctggttaagtaccgggaggagctaacgaggccgctgc 705 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 598 tcatggaggcgtaccatgagatgctggtgaagtaccgggaggagctgacgaggccgctgc 657 Query: 706 aggaggcgatggagttcctgaggagggtggagtcgcagctcaactcgctctccatctccg 765 ||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 658 aggaggccatggagttcctgaggagggtggagacgcaactcaactccctctccatctccg 717 Query: 766 gcagatcgctgcgcaatatcctttcctccggctcttctgaggaggaccaggaagggagcg 825 ||||||||||||||||||||||||||||||||||||| ||||| || || ||||| |||| Sbjct: 718 gcagatcgctgcgcaatatcctttcctccggctcttccgaggaagatcaagaaggcagcg 777 Query: 826 gaggagagacagagctccctgagattgatgcacacggtgtggaccaggagctcaagcacc 885 |||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 778 gaggagagacagagcttcctgagattgatgcccacggcgtggaccaggagctgaagcacc 837 Query: 886 atctcctgaagaagtacagtggctacctgagctc 919 |||||||||||||||||||||| ||||||||||| Sbjct: 838 atctcctgaagaagtacagtgggtacctgagctc 871