BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027h22 (790 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073755.1| Oryza sativa (japonica cultivar-group) Os12g... 718 0.0 dbj|AK108664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 710 0.0 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 664 0.0 emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 664 0.0 gb|BT017050.1| Zea mays clone EL01N0353D04.c mRNA sequence 168 2e-38 >ref|NM_001073755.1| Oryza sativa (japonica cultivar-group) Os12g0605300 (Os12g0605300) mRNA, complete cds Length = 1472 Score = 718 bits (362), Expect = 0.0 Identities = 557/622 (89%) Strand = Plus / Plus Query: 1 ctgtaaatgtgatgattgcaaaaatccgtatgggagaaaagttggttttattttggacag 60 ||||||||||||||||||||| || || |||||||||||||||||| |||||||||| | Sbjct: 689 ctgtaaatgtgatgattgcaagaacccatatgggagaaaagttggtgttattttggatgg 748 Query: 61 taaaagtattcttgctgcacctacaccgaatgaaaggaatggaacggaagctgactcaag 120 ||||| ||||||||||| ||| ||||| ||||||||||||||||| |||||||||||||| Sbjct: 749 taaaaatattcttgctggaccaacaccaaatgaaaggaatggaacagaagctgactcaag 808 Query: 121 tgatgatgatgaagatgattattacataaatcggccgctctctcctatccccccatctcc 180 ||| ||||| |||||||||||||| || || || || ||||| ||| || |||||||||| Sbjct: 809 tgacgatgaagaagatgattattatatgaaccgaccactctcgcctgtctccccatctcc 868 Query: 181 agtatccagagagtcttcattccaacaggagaccctagtaggcgttgaagtccagactat 240 ||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 869 agtatccagagagtcttcattccaacaggagactttagttggcgtcgaagtccagactat 928 Query: 241 gaatgggcacctgtacccaaaaccgatcacccaagtgcggccagagtcatggcagctctc 300 ||||||||| || |||||||||||| | |||||||||||||| || |||||||||||| | Sbjct: 929 gaatgggcatctatacccaaaaccgcttacccaagtgcggccggaatcatggcagctcac 988 Query: 301 caggaggtctactgaggaagtgcggggagagccatggcgttacttgaggaggcccagcga 360 |||||| |||||||||||||||| |||||| |||||| ||||||||||||||||| || Sbjct: 989 taggaggcctactgaggaagtgcgaggagaggcatggcactacttgaggaggcccagtga 1048 Query: 361 ggatggagcatctgatgttatggaaggacatgccgatcccaagtttcagagggacaataa 420 ||||||| |||| |||||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 1049 ggatggaacatccgatgttatggaaggacatgctgaccccaagtttcagagagacaataa 1108 Query: 421 gcagccagagagccttgcggacaggtacagcatcccgcggtgcatcgaggtgatgaatgc 480 |||| || | || || || ||||||||||| ||||||||||||||||||||||| || Sbjct: 1109 acagctggaaaaccatgttgataggtacagcattccgcggtgcatcgaggtgatgaacgc 1168 Query: 481 catggcagacctctcgccgatggagaagtcgctagcaccggacgtcttcttggatccgaa 540 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | Sbjct: 1169 catggcagacctctcgccgatcgagaagtcgctcgcaccggacgtcttcttggatccaag 1228 Query: 541 caaccgggagattttcctttcactgagtgtagatattcggaccatgtggctcaggcgtaa 600 ||| ||||||||||| |||||||||| |||||||||||| ||||||||||| | |||||| Sbjct: 1229 caatcgggagatttttctttcactgactgtagatattcgaaccatgtggctgaagcgtaa 1288 Query: 601 gatgaagagccttgtgtagaga 622 |||||||||||||||||||||| Sbjct: 1289 gatgaagagccttgtgtagaga 1310 >dbj|AK108664.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G02, full insert sequence Length = 1469 Score = 710 bits (358), Expect = 0.0 Identities = 556/622 (89%) Strand = Plus / Plus Query: 1 ctgtaaatgtgatgattgcaaaaatccgtatgggagaaaagttggttttattttggacag 60 ||||||||||||||||||||| || || |||||||||||||||||| |||||||||| | Sbjct: 686 ctgtaaatgtgatgattgcaagaacccatatgggagaaaagttggtgttattttggatgg 745 Query: 61 taaaagtattcttgctgcacctacaccgaatgaaaggaatggaacggaagctgactcaag 120 ||||| ||||||||||| ||| ||||| ||||||||||||||||| |||||||||||||| Sbjct: 746 taaaaatattcttgctggaccaacaccaaatgaaaggaatggaacagaagctgactcaag 805 Query: 121 tgatgatgatgaagatgattattacataaatcggccgctctctcctatccccccatctcc 180 ||| ||||| |||||||||||||| || || || || ||||| ||| || |||||||||| Sbjct: 806 tgacgatgaagaagatgattattatatgaaccgaccactctcgcctgtctccccatctcc 865 Query: 181 agtatccagagagtcttcattccaacaggagaccctagtaggcgttgaagtccagactat 240 ||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 866 agtatccagagagtcttcattccaacaggagactttagttggcgtcgaagtccagactat 925 Query: 241 gaatgggcacctgtacccaaaaccgatcacccaagtgcggccagagtcatggcagctctc 300 ||||||||| || |||||||||||| | |||||||||||||| || |||||||||||| | Sbjct: 926 gaatgggcatctatacccaaaaccgcttacccaagtgcggccggaatcatggcagctcac 985 Query: 301 caggaggtctactgaggaagtgcggggagagccatggcgttacttgaggaggcccagcga 360 |||||| |||||||||||||||| |||||| |||||| ||||||||||||||||| || Sbjct: 986 taggaggcctactgaggaagtgcgaggagaggcatggcactacttgaggaggcccagtga 1045 Query: 361 ggatggagcatctgatgttatggaaggacatgccgatcccaagtttcagagggacaataa 420 ||||||| |||| ||||||| |||||||||||| || |||||||||||||| |||||||| Sbjct: 1046 ggatggaacatccgatgttacggaaggacatgctgaccccaagtttcagagagacaataa 1105 Query: 421 gcagccagagagccttgcggacaggtacagcatcccgcggtgcatcgaggtgatgaatgc 480 |||| || | || || || ||||||||||| ||||||||||||||||||||||| || Sbjct: 1106 acagctggaaaaccatgttgataggtacagcattccgcggtgcatcgaggtgatgaacgc 1165 Query: 481 catggcagacctctcgccgatggagaagtcgctagcaccggacgtcttcttggatccgaa 540 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | Sbjct: 1166 catggcagacctctcgccgatcgagaagtcgctcgcaccggacgtcttcttggatccaag 1225 Query: 541 caaccgggagattttcctttcactgagtgtagatattcggaccatgtggctcaggcgtaa 600 ||| ||||||||||| |||||||||| |||||||||||| ||||||||||| | |||||| Sbjct: 1226 caatcgggagatttttctttcactgactgtagatattcgaaccatgtggctgaagcgtaa 1285 Query: 601 gatgaagagccttgtgtagaga 622 |||||||||||||||||||||| Sbjct: 1286 gatgaagagccttgtgtagaga 1307 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 664 bits (335), Expect = 0.0 Identities = 521/583 (89%) Strand = Plus / Minus Query: 40 agttggttttattttggacagtaaaagtattcttgctgcacctacaccgaatgaaaggaa 99 ||||||| |||||||||| |||||| ||||||||||| ||| ||||| ||||||||||| Sbjct: 25587892 agttggtgttattttggatggtaaaaatattcttgctggaccaacaccaaatgaaaggaa 25587833 Query: 100 tggaacggaagctgactcaagtgatgatgatgaagatgattattacataaatcggccgct 159 |||||| ||||||||||||||||| ||||| |||||||||||||| || || || || || Sbjct: 25587832 tggaacagaagctgactcaagtgacgatgaagaagatgattattatatgaaccgaccact 25587773 Query: 160 ctctcctatccccccatctccagtatccagagagtcttcattccaacaggagaccctagt 219 ||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 25587772 ctcgcctgtctccccatctccagtatccagagagtcttcattccaacaggagactttagt 25587713 Query: 220 aggcgttgaagtccagactatgaatgggcacctgtacccaaaaccgatcacccaagtgcg 279 ||||| ||||||||||||||||||||||| || |||||||||||| | ||||||||||| Sbjct: 25587712 tggcgtcgaagtccagactatgaatgggcatctatacccaaaaccgcttacccaagtgcg 25587653 Query: 280 gccagagtcatggcagctctccaggaggtctactgaggaagtgcggggagagccatggcg 339 ||| || |||||||||||| | |||||| |||||||||||||||| |||||| |||||| Sbjct: 25587652 gccggaatcatggcagctcactaggaggcctactgaggaagtgcgaggagaggcatggca 25587593 Query: 340 ttacttgaggaggcccagcgaggatggagcatctgatgttatggaaggacatgccgatcc 399 ||||||||||||||||| ||||||||| |||| |||||||||||||||||||| || || Sbjct: 25587592 ctacttgaggaggcccagtgaggatggaacatccgatgttatggaaggacatgctgaccc 25587533 Query: 400 caagtttcagagggacaataagcagccagagagccttgcggacaggtacagcatcccgcg 459 |||||||||||| |||||||| |||| || | || || || ||||||||||| ||||| Sbjct: 25587532 caagtttcagagagacaataaacagctggaaaaccatgttgataggtacagcattccgcg 25587473 Query: 460 gtgcatcgaggtgatgaatgccatggcagacctctcgccgatggagaagtcgctagcacc 519 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 25587472 gtgcatcgaggtgatgaacgccatggcagacctctcgccgatcgagaagtcgctcgcacc 25587413 Query: 520 ggacgtcttcttggatccgaacaaccgggagattttcctttcactgagtgtagatattcg 579 |||||||||||||||||| | ||| ||||||||||| |||||||||| |||||||||||| Sbjct: 25587412 ggacgtcttcttggatccaagcaatcgggagatttttctttcactgactgtagatattcg 25587353 Query: 580 gaccatgtggctcaggcgtaagatgaagagccttgtgtagaga 622 ||||||||||| | |||||||||||||||||||||||||||| Sbjct: 25587352 aaccatgtggctgaagcgtaagatgaagagccttgtgtagaga 25587310 >emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 664 bits (335), Expect = 0.0 Identities = 521/583 (89%) Strand = Plus / Plus Query: 40 agttggttttattttggacagtaaaagtattcttgctgcacctacaccgaatgaaaggaa 99 ||||||| |||||||||| |||||| ||||||||||| ||| ||||| ||||||||||| Sbjct: 85826 agttggtgttattttggatggtaaaaatattcttgctggaccaacaccaaatgaaaggaa 85885 Query: 100 tggaacggaagctgactcaagtgatgatgatgaagatgattattacataaatcggccgct 159 |||||| ||||||||||||||||| ||||| |||||||||||||| || || || || || Sbjct: 85886 tggaacagaagctgactcaagtgacgatgaagaagatgattattatatgaaccgaccact 85945 Query: 160 ctctcctatccccccatctccagtatccagagagtcttcattccaacaggagaccctagt 219 ||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 85946 ctcgcctgtctccccatctccagtatccagagagtcttcattccaacaggagactttagt 86005 Query: 220 aggcgttgaagtccagactatgaatgggcacctgtacccaaaaccgatcacccaagtgcg 279 ||||| ||||||||||||||||||||||| || |||||||||||| | ||||||||||| Sbjct: 86006 tggcgtcgaagtccagactatgaatgggcatctatacccaaaaccgcttacccaagtgcg 86065 Query: 280 gccagagtcatggcagctctccaggaggtctactgaggaagtgcggggagagccatggcg 339 ||| || |||||||||||| | |||||| |||||||||||||||| |||||| |||||| Sbjct: 86066 gccggaatcatggcagctcactaggaggcctactgaggaagtgcgaggagaggcatggca 86125 Query: 340 ttacttgaggaggcccagcgaggatggagcatctgatgttatggaaggacatgccgatcc 399 ||||||||||||||||| ||||||||| |||| |||||||||||||||||||| || || Sbjct: 86126 ctacttgaggaggcccagtgaggatggaacatccgatgttatggaaggacatgctgaccc 86185 Query: 400 caagtttcagagggacaataagcagccagagagccttgcggacaggtacagcatcccgcg 459 |||||||||||| |||||||| |||| || | || || || ||||||||||| ||||| Sbjct: 86186 caagtttcagagagacaataaacagctggaaaaccatgttgataggtacagcattccgcg 86245 Query: 460 gtgcatcgaggtgatgaatgccatggcagacctctcgccgatggagaagtcgctagcacc 519 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 86246 gtgcatcgaggtgatgaacgccatggcagacctctcgccgatcgagaagtcgctcgcacc 86305 Query: 520 ggacgtcttcttggatccgaacaaccgggagattttcctttcactgagtgtagatattcg 579 |||||||||||||||||| | ||| ||||||||||| |||||||||| |||||||||||| Sbjct: 86306 ggacgtcttcttggatccaagcaatcgggagatttttctttcactgactgtagatattcg 86365 Query: 580 gaccatgtggctcaggcgtaagatgaagagccttgtgtagaga 622 ||||||||||| | |||||||||||||||||||||||||||| Sbjct: 86366 aaccatgtggctgaagcgtaagatgaagagccttgtgtagaga 86408 >gb|BT017050.1| Zea mays clone EL01N0353D04.c mRNA sequence Length = 472 Score = 168 bits (85), Expect = 2e-38 Identities = 154/177 (87%) Strand = Plus / Minus Query: 439 ggacaggtacagcatcccgcggtgcatcgaggtgatgaatgccatggcagacctctcgcc 498 |||||||| | ||||||||||||||||||||||||||| |||||||| || || ||||| Sbjct: 386 ggacaggttcggcatcccgcggtgcatcgaggtgatgagcgccatggcggagctgtcgcc 327 Query: 499 gatggagaagtcgctagcaccggacgtcttcttggatccgaacaaccgggagattttcct 558 | ||||||||||||| || || |||||||||||||| ||| |||||||||||| ||||| Sbjct: 326 ggtggagaagtcgctggcgcccgacgtcttcttggacgcgagcaaccgggagatcttcct 267 Query: 559 ttcactgagtgtagatattcggaccatgtggctcaggcgtaagatgaagagccttgt 615 || ||||||||||||||| || | || ||||| ||||| ||||||||||||||||| Sbjct: 266 ctcgctgagtgtagatattaggccaatctggctgaggcgcaagatgaagagccttgt 210