BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst027d18
         (522 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   101   3e-18
gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genom...   101   3e-18
emb|AJ490357.1|OSA490357 Oryza sativa z159a snoRNA                    101   3e-18
emb|AJ490358.1|OSA490358 Oryza sativa z159b snoRNA                     88   4e-14
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...    86   2e-13

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  101 bits (51), Expect = 3e-18
 Identities = 77/83 (92%), Gaps = 2/83 (2%)
 Strand = Plus / Plus

                                                                            
Query: 198      tctccgatgatgatgtattgataatactttcgttcttctgaaatttgcaatgtggaagaa 257
                |||||||||||||||||||  || |||||||||||||||||| || | ||||||||||||
Sbjct: 16595114 tctccgatgatgatgtattttta-tactttcgttcttctgaagtt-gtaatgtggaagaa 16595171

                                       
Query: 258      caatttggagacctgaactgagg 280
                |||||||||||||||||||||||
Sbjct: 16595172 caatttggagacctgaactgagg 16595194


>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete
             sequence
          Length = 133843

 Score =  101 bits (51), Expect = 3e-18
 Identities = 77/83 (92%), Gaps = 2/83 (2%)
 Strand = Plus / Minus

                                                                         
Query: 198   tctccgatgatgatgtattgataatactttcgttcttctgaaatttgcaatgtggaagaa 257
             |||||||||||||||||||  || |||||||||||||||||| || | ||||||||||||
Sbjct: 52562 tctccgatgatgatgtattttta-tactttcgttcttctgaagtt-gtaatgtggaagaa 52505

                                    
Query: 258   caatttggagacctgaactgagg 280
             |||||||||||||||||||||||
Sbjct: 52504 caatttggagacctgaactgagg 52482


>emb|AJ490357.1|OSA490357 Oryza sativa z159a snoRNA
          Length = 86

 Score =  101 bits (51), Expect = 3e-18
 Identities = 77/83 (92%), Gaps = 2/83 (2%)
 Strand = Plus / Plus

                                                                       
Query: 198 tctccgatgatgatgtattgataatactttcgttcttctgaaatttgcaatgtggaagaa 257
           |||||||||||||||||||  || |||||||||||||||||| || | ||||||||||||
Sbjct: 2   tctccgatgatgatgtattttta-tactttcgttcttctgaagtt-gtaatgtggaagaa 59

                                  
Query: 258 caatttggagacctgaactgagg 280
           |||||||||||||||||||||||
Sbjct: 60  caatttggagacctgaactgagg 82


>emb|AJ490358.1|OSA490358 Oryza sativa z159b snoRNA
          Length = 90

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 57/60 (95%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                       
Query: 221 atactttcgttcttctgaaatttgcaatgtggaagaacaatttggagacctgaactgagg 280
           ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||
Sbjct: 26  atactttcgttcttctgaagtt-gcaatgtggaagaactatttggagacctgaactgagg 84


>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 56/59 (94%), Gaps = 1/59 (1%)
 Strand = Plus / Plus

                                                                           
Query: 222      tactttcgttcttctgaaatttgcaatgtggaagaacaatttggagacctgaactgagg 280
                |||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||
Sbjct: 22551464 tactttcgttcttctgaagtt-gcaatgtggaagaactatttggagacctgaactgagg 22551521