BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027c21 (865 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT828002.1| Oryza sativa (indica cultivar-group) cDNA clone:... 325 2e-85 ref|NM_001073859.1| Oryza sativa (japonica cultivar-group) Os12g... 309 1e-80 dbj|AK121150.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 1e-80 gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 192 2e-45 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 192 2e-45 >emb|CT828002.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN010G13, full insert sequence Length = 804 Score = 325 bits (164), Expect = 2e-85 Identities = 371/440 (84%) Strand = Plus / Plus Query: 194 catggcgttcgtcagatcacactcaaatgcttcctctggaatgggggttgccgcagagtg 253 |||||||||||||||||||| | ||||||||||||||||||| || || || || ||||| Sbjct: 157 catggcgttcgtcagatcacgcgcaaatgcttcctctggaatcggtgtagctgccgagtg 216 Query: 254 caaggaaacattcctcgagcttcagaggaagaaaacacatcgctacgtcatcttcaagat 313 |||| | |||||||| ||||| |||||||||||| |||| ||||| |||||||||||||| Sbjct: 217 caagcagacattcctggagctccagaggaagaaatcacaccgctatgtcatcttcaagat 276 Query: 314 tgatgagaagggaaaggaggttgttgtggagaagactggtgctgtgactgagagcttcga 373 || || ||| | ||||||||||| || || ||||| ||| | ||| ||||||||||| Sbjct: 277 cgacgacaagtgcaaggaggttgtcgtcgacaagacaggttcatcgaccgagagcttcga 336 Query: 374 tgatttcatggactctcttcctgagactgattgtcgatatgccatctatgatttcgactt 433 |||||||||||||| || ||||| |||| || || || |||||||| || |||||||| Sbjct: 337 cgatttcatggactcgctccctgaatctgactgccgctacgccatctacgacttcgactt 396 Query: 434 tgtcactgaagagaactgccagaagagcaagattttcttcgttgcatggtcgccttcagt 493 ||||| || ||||||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 397 cgtcaccgaggagaactgccagaagagcaagatcttcttcgtcgcatggtcgccttcggt 456 Query: 494 ttcccgtatccgttctaagatgctgtatgctacctccaaggatcggttcaggcgtgagct 553 ||| || ||||| | |||||| |||||||||||||||| || ||||||||| | ||||| Sbjct: 457 ttctcgcatccgcgccaagatgttgtatgctacctccaaagaacggttcaggagagagct 516 Query: 554 ggacggcatacactatgagatccaggcaactgacccgtcggagttggacatagaagtcct 613 ||| || | ||||||||||| ||||||||||| || |||||| ||||||| || | || Sbjct: 517 ggatggtgtgcactatgagattcaggcaactgatccatcggagctggacattgagcttct 576 Query: 614 cagagaccgtgcgcattgag 633 ||||||||||| ||||||| Sbjct: 577 tagagaccgtgctcattgag 596 >ref|NM_001073859.1| Oryza sativa (japonica cultivar-group) Os12g0628100 (Os12g0628100) mRNA, complete cds Length = 698 Score = 309 bits (156), Expect = 1e-80 Identities = 369/440 (83%) Strand = Plus / Plus Query: 194 catggcgttcgtcagatcacactcaaatgcttcctctggaatgggggttgccgcagagtg 253 |||||| ||||||||||||| | ||||||||||||||||||| || || || || ||||| Sbjct: 56 catggcattcgtcagatcacgcgcaaatgcttcctctggaatcggtgtagctgccgagtg 115 Query: 254 caaggaaacattcctcgagcttcagaggaagaaaacacatcgctacgtcatcttcaagat 313 |||| | ||||| || |||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 116 caagcagacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 175 Query: 314 tgatgagaagggaaaggaggttgttgtggagaagactggtgctgtgactgagagcttcga 373 || || ||| | |||||||| || || || ||||| ||| | ||| ||||||||||| Sbjct: 176 cgacgacaagtgcaaggaggtcgtcgtcgaaaagacaggttcatcgaccgagagcttcga 235 Query: 374 tgatttcatggactctcttcctgagactgattgtcgatatgccatctatgatttcgactt 433 |||||||||||||| || ||||| |||| || || || |||||||| || |||||||| Sbjct: 236 cgatttcatggactcactccctgaatctgactgccgctacgccatctacgacttcgactt 295 Query: 434 tgtcactgaagagaactgccagaagagcaagattttcttcgttgcatggtcgccttcagt 493 ||||| || ||||||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 296 cgtcaccgaggagaactgccagaagagcaagatcttcttcgtcgcatggtcgccttcggt 355 Query: 494 ttcccgtatccgttctaagatgctgtatgctacctccaaggatcggttcaggcgtgagct 553 ||| || ||||| | |||||| |||||||||||||||| || ||||||||| | ||||| Sbjct: 356 ttctcgcatccgcgccaagatgttgtatgctacctccaaagaacggttcaggagagagct 415 Query: 554 ggacggcatacactatgagatccaggcaactgacccgtcggagttggacatagaagtcct 613 ||| || | ||||||||||| ||||||||||| ||||||||| ||||||| || | || Sbjct: 416 ggatggtgtgcactatgagattcaggcaactgatccgtcggagctggacattgagcttct 475 Query: 614 cagagaccgtgcgcattgag 633 ||||| ||||| ||||||| Sbjct: 476 tagagagcgtgctcattgag 495 >dbj|AK121150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078I07, full insert sequence Length = 699 Score = 309 bits (156), Expect = 1e-80 Identities = 369/440 (83%) Strand = Plus / Plus Query: 194 catggcgttcgtcagatcacactcaaatgcttcctctggaatgggggttgccgcagagtg 253 |||||| ||||||||||||| | ||||||||||||||||||| || || || || ||||| Sbjct: 57 catggcattcgtcagatcacgcgcaaatgcttcctctggaatcggtgtagctgccgagtg 116 Query: 254 caaggaaacattcctcgagcttcagaggaagaaaacacatcgctacgtcatcttcaagat 313 |||| | ||||| || |||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 117 caagcagacatttctggagcttcagaggaagaaatcacaccgctatgtcatcttcaagat 176 Query: 314 tgatgagaagggaaaggaggttgttgtggagaagactggtgctgtgactgagagcttcga 373 || || ||| | |||||||| || || || ||||| ||| | ||| ||||||||||| Sbjct: 177 cgacgacaagtgcaaggaggtcgtcgtcgaaaagacaggttcatcgaccgagagcttcga 236 Query: 374 tgatttcatggactctcttcctgagactgattgtcgatatgccatctatgatttcgactt 433 |||||||||||||| || ||||| |||| || || || |||||||| || |||||||| Sbjct: 237 cgatttcatggactcactccctgaatctgactgccgctacgccatctacgacttcgactt 296 Query: 434 tgtcactgaagagaactgccagaagagcaagattttcttcgttgcatggtcgccttcagt 493 ||||| || ||||||||||||||||||||||| |||||||| |||||||||||||| || Sbjct: 297 cgtcaccgaggagaactgccagaagagcaagatcttcttcgtcgcatggtcgccttcggt 356 Query: 494 ttcccgtatccgttctaagatgctgtatgctacctccaaggatcggttcaggcgtgagct 553 ||| || ||||| | |||||| |||||||||||||||| || ||||||||| | ||||| Sbjct: 357 ttctcgcatccgcgccaagatgttgtatgctacctccaaagaacggttcaggagagagct 416 Query: 554 ggacggcatacactatgagatccaggcaactgacccgtcggagttggacatagaagtcct 613 ||| || | ||||||||||| ||||||||||| ||||||||| ||||||| || | || Sbjct: 417 ggatggtgtgcactatgagattcaggcaactgatccgtcggagctggacattgagcttct 476 Query: 614 cagagaccgtgcgcattgag 633 ||||| ||||| ||||||| Sbjct: 477 tagagagcgtgctcattgag 496 >gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 192 bits (97), Expect = 2e-45 Identities = 226/269 (84%) Strand = Plus / Minus Query: 217 caaatgcttcctctggaatgggggttgccgcagagtgcaaggaaacattcctcgagcttc 276 ||||||||||||||||||| || || || || ||||||||| | ||||| || ||||||| Sbjct: 48124 caaatgcttcctctggaatcggtgtagctgccgagtgcaagcagacatttctggagcttc 48065 Query: 277 agaggaagaaaacacatcgctacgtcatcttcaagattgatgagaagggaaaggaggttg 336 ||||||||||| |||| ||||| |||||||||||||| || || ||| | |||||||| | Sbjct: 48064 agaggaagaaatcacaccgctatgtcatcttcaagatcgacgacaagtgcaaggaggtcg 48005 Query: 337 ttgtggagaagactggtgctgtgactgagagcttcgatgatttcatggactctcttcctg 396 | || || ||||| ||| | ||| ||||||||||| |||||||||||||| || |||| Sbjct: 48004 tcgtcgaaaagacaggttcatcgaccgagagcttcgacgatttcatggactcactccctg 47945 Query: 397 agactgattgtcgatatgccatctatgatttcgactttgtcactgaagagaactgccaga 456 | |||| || || || |||||||| || |||||||| ||||| || ||||||||||||| Sbjct: 47944 aatctgactgccgctacgccatctacgacttcgacttcgtcaccgaggagaactgccaga 47885 Query: 457 agagcaagattttcttcgttgcatggtcg 485 |||||||||| |||||||| ||||||||| Sbjct: 47884 agagcaagatcttcttcgtcgcatggtcg 47856 Score = 105 bits (53), Expect = 3e-19 Identities = 128/153 (83%) Strand = Plus / Minus Query: 481 ggtcgccttcagtttcccgtatccgttctaagatgctgtatgctacctccaaggatcggt 540 |||||||||| ||||| || ||||| | |||||| |||||||||||||||| || |||| Sbjct: 47688 ggtcgccttcggtttctcgcatccgcgccaagatgttgtatgctacctccaaagaacggt 47629 Query: 541 tcaggcgtgagctggacggcatacactatgagatccaggcaactgacccgtcggagttgg 600 ||||| | |||||||| || | ||||||||||| ||||||||||| ||||||||| ||| Sbjct: 47628 tcaggagagagctggatggtgtgcactatgagattcaggcaactgatccgtcggagctgg 47569 Query: 601 acatagaagtcctcagagaccgtgcgcattgag 633 |||| || | || ||||| ||||| ||||||| Sbjct: 47568 acattgagcttcttagagagcgtgctcattgag 47536 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 192 bits (97), Expect = 2e-45 Identities = 226/269 (84%) Strand = Plus / Minus Query: 217 caaatgcttcctctggaatgggggttgccgcagagtgcaaggaaacattcctcgagcttc 276 ||||||||||||||||||| || || || || ||||||||| | ||||| || ||||||| Sbjct: 26923157 caaatgcttcctctggaatcggtgtagctgccgagtgcaagcagacatttctggagcttc 26923098 Query: 277 agaggaagaaaacacatcgctacgtcatcttcaagattgatgagaagggaaaggaggttg 336 ||||||||||| |||| ||||| |||||||||||||| || || ||| | |||||||| | Sbjct: 26923097 agaggaagaaatcacaccgctatgtcatcttcaagatcgacgacaagtgcaaggaggtcg 26923038 Query: 337 ttgtggagaagactggtgctgtgactgagagcttcgatgatttcatggactctcttcctg 396 | || || ||||| ||| | ||| ||||||||||| |||||||||||||| || |||| Sbjct: 26923037 tcgtcgaaaagacaggttcatcgaccgagagcttcgacgatttcatggactcactccctg 26922978 Query: 397 agactgattgtcgatatgccatctatgatttcgactttgtcactgaagagaactgccaga 456 | |||| || || || |||||||| || |||||||| ||||| || ||||||||||||| Sbjct: 26922977 aatctgactgccgctacgccatctacgacttcgacttcgtcaccgaggagaactgccaga 26922918 Query: 457 agagcaagattttcttcgttgcatggtcg 485 |||||||||| |||||||| ||||||||| Sbjct: 26922917 agagcaagatcttcttcgtcgcatggtcg 26922889 Score = 105 bits (53), Expect = 3e-19 Identities = 128/153 (83%) Strand = Plus / Minus Query: 481 ggtcgccttcagtttcccgtatccgttctaagatgctgtatgctacctccaaggatcggt 540 |||||||||| ||||| || ||||| | |||||| |||||||||||||||| || |||| Sbjct: 26922721 ggtcgccttcggtttctcgcatccgcgccaagatgttgtatgctacctccaaagaacggt 26922662 Query: 541 tcaggcgtgagctggacggcatacactatgagatccaggcaactgacccgtcggagttgg 600 ||||| | |||||||| || | ||||||||||| ||||||||||| ||||||||| ||| Sbjct: 26922661 tcaggagagagctggatggtgtgcactatgagattcaggcaactgatccgtcggagctgg 26922602 Query: 601 acatagaagtcctcagagaccgtgcgcattgag 633 |||| || | || ||||| ||||| ||||||| Sbjct: 26922601 acattgagcttcttagagagcgtgctcattgag 26922569