BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst027a03 (1408 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051641.1| Oryza sativa (japonica cultivar-group) Os01g... 345 3e-91 dbj|AK105713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 3e-91 dbj|AK068254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 3e-91 gb|AC188038.1| Genomic sequence for Sorghum bicolor BAC clone SB... 165 6e-37 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 6e-34 >ref|NM_001051641.1| Oryza sativa (japonica cultivar-group) Os01g0900800 (Os01g0900800) mRNA, complete cds Length = 1670 Score = 345 bits (174), Expect = 3e-91 Identities = 329/380 (86%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 743 cgacgacatggtcactagcttcagcaacatcgactcacagtttagcttgtcgaag---tc 799 ||||||||||||| | |||||||||||||||||||| |||||| ||||||||||| || Sbjct: 899 cgacgacatggtctccagcttcagcaacatcgactcccagtttggcttgtcgaagcagtc 958 Query: 800 atcattagagatgtccggcctggatgattacctgcagctgcagcaggactccatcgcttg 859 || | |||||| ||||| ||||||| | | ||||||| |||| |||||| |||| || Sbjct: 959 gtcgctggagatggccggcatggatgacttcttgcagctccagccagactccgtcgcctg 1018 Query: 860 caaagtccgtgcaaagcgtggatgcgcgactcacccgcgaagcattgcggagagggaaag 919 || | ||| |||||||| || |||||||| |||||||| ||||| || |||||||| || Sbjct: 1019 cagggcccgggcaaagcgcggctgcgcgacgcacccgcggagcatcgctgagagggagag 1078 Query: 920 aagaacaaggattagcaagaggctgaagaagctgcaagtactcgtgcctaacatggacaa 979 ||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||| Sbjct: 1079 gagaacgaggattagcaagaggctgaagaagctgcaggatctcgtgccgaacatggacaa 1138 Query: 980 gcaaacaaatacgtcagacatgttggatcttgctgtacactacatcagagagctgcaggg 1039 |||||| ||||| ||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 1139 gcaaacgaatacatcagacatgttggatattgctgtaacctacatcaaggagcttcaggg 1198 Query: 1040 ccaagttgagaagctaaaacacgaccaagcgaactgcacttgctcaggcaaccacaactg 1099 ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| | || Sbjct: 1199 ccaagttgagaagctaaaacatgaccaagcaaactgcacttgctcaggcaagcacgattg 1258 Query: 1100 ctgaggctggagaaccagat 1119 |||||||||||||||||||| Sbjct: 1259 ctgaggctggagaaccagat 1278 Score = 155 bits (78), Expect = 6e-34 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 497 cgccggcgcgatggcacacaggaggctgagctcgcagtggagcttctcgaggcaggacct 556 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 605 cgccggcgcgatggcgcacaggaggctgagctcgcagtggagcttctcgcggcaggacct 664 Query: 557 gccgcagatatcggagatgggga---tcatacccgacatcggggagagcatc 605 ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 665 gccgcagatatcggagatgggcggcctcatccccgacatcggggagagcatc 716 Score = 107 bits (54), Expect = 1e-19 Identities = 66/70 (94%) Strand = Plus / Plus Query: 372 gtcccgctcttccggcacagcagctcccccgccgggctgctctcccgcctcatggccgac 431 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 483 gtcccgctcttccgccacagcagctcccccgccggcctcctctcccgcctcatggctgac 542 Query: 432 ccgcacggca 441 |||||||||| Sbjct: 543 ccgcacggca 552 Score = 93.7 bits (47), Expect = 2e-15 Identities = 73/81 (90%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 632 cggcgcgcagccctcctcctacctctcc---agaaacttctccgtgagctcgtgggacga 688 |||||||||| ||||||||| ||||||| || ||||||||| ||||||| |||||||| Sbjct: 761 cggcgcgcagtcctcctccttcctctcctccaggaacttctccatgagctcctgggacga 820 Query: 689 caccaactccatcatgttctc 709 ||||||||||||||||||||| Sbjct: 821 caccaactccatcatgttctc 841 Score = 87.7 bits (44), Expect = 1e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 212 cttctccggggagtcgtccgggctcacctcctgcgagtccagctgccggacg 263 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 326 cttctccgcggagtcgtcggggctcacctcctgcgagtccagctgccggacg 377 >dbj|AK105713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E12, full insert sequence Length = 1550 Score = 345 bits (174), Expect = 3e-91 Identities = 329/380 (86%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 743 cgacgacatggtcactagcttcagcaacatcgactcacagtttagcttgtcgaag---tc 799 ||||||||||||| | |||||||||||||||||||| |||||| ||||||||||| || Sbjct: 916 cgacgacatggtctccagcttcagcaacatcgactcccagtttggcttgtcgaagcagtc 975 Query: 800 atcattagagatgtccggcctggatgattacctgcagctgcagcaggactccatcgcttg 859 || | |||||| ||||| ||||||| | | ||||||| |||| |||||| |||| || Sbjct: 976 gtcgctggagatggccggcatggatgacttcttgcagctccagccagactccgtcgcctg 1035 Query: 860 caaagtccgtgcaaagcgtggatgcgcgactcacccgcgaagcattgcggagagggaaag 919 || | ||| |||||||| || |||||||| |||||||| ||||| || |||||||| || Sbjct: 1036 cagggcccgggcaaagcgcggctgcgcgacgcacccgcggagcatcgctgagagggagag 1095 Query: 920 aagaacaaggattagcaagaggctgaagaagctgcaagtactcgtgcctaacatggacaa 979 ||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||| Sbjct: 1096 gagaacgaggattagcaagaggctgaagaagctgcaggatctcgtgccgaacatggacaa 1155 Query: 980 gcaaacaaatacgtcagacatgttggatcttgctgtacactacatcagagagctgcaggg 1039 |||||| ||||| ||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 1156 gcaaacgaatacatcagacatgttggatattgctgtaacctacatcaaggagcttcaggg 1215 Query: 1040 ccaagttgagaagctaaaacacgaccaagcgaactgcacttgctcaggcaaccacaactg 1099 ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| | || Sbjct: 1216 ccaagttgagaagctaaaacatgaccaagcaaactgcacttgctcaggcaagcacgattg 1275 Query: 1100 ctgaggctggagaaccagat 1119 |||||||||||||||||||| Sbjct: 1276 ctgaggctggagaaccagat 1295 Score = 155 bits (78), Expect = 6e-34 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 497 cgccggcgcgatggcacacaggaggctgagctcgcagtggagcttctcgaggcaggacct 556 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 622 cgccggcgcgatggcgcacaggaggctgagctcgcagtggagcttctcgcggcaggacct 681 Query: 557 gccgcagatatcggagatgggga---tcatacccgacatcggggagagcatc 605 ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 682 gccgcagatatcggagatgggcggcctcatccccgacatcggggagagcatc 733 Score = 107 bits (54), Expect = 1e-19 Identities = 66/70 (94%) Strand = Plus / Plus Query: 372 gtcccgctcttccggcacagcagctcccccgccgggctgctctcccgcctcatggccgac 431 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 500 gtcccgctcttccgccacagcagctcccccgccggcctcctctcccgcctcatggctgac 559 Query: 432 ccgcacggca 441 |||||||||| Sbjct: 560 ccgcacggca 569 Score = 93.7 bits (47), Expect = 2e-15 Identities = 73/81 (90%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 632 cggcgcgcagccctcctcctacctctcc---agaaacttctccgtgagctcgtgggacga 688 |||||||||| ||||||||| ||||||| || ||||||||| ||||||| |||||||| Sbjct: 778 cggcgcgcagtcctcctccttcctctcctccaggaacttctccatgagctcctgggacga 837 Query: 689 caccaactccatcatgttctc 709 ||||||||||||||||||||| Sbjct: 838 caccaactccatcatgttctc 858 Score = 87.7 bits (44), Expect = 1e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 212 cttctccggggagtcgtccgggctcacctcctgcgagtccagctgccggacg 263 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 343 cttctccgcggagtcgtcggggctcacctcctgcgagtccagctgccggacg 394 >dbj|AK068254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149F02, full insert sequence Length = 1671 Score = 345 bits (174), Expect = 3e-91 Identities = 329/380 (86%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 743 cgacgacatggtcactagcttcagcaacatcgactcacagtttagcttgtcgaag---tc 799 ||||||||||||| | |||||||||||||||||||| |||||| ||||||||||| || Sbjct: 900 cgacgacatggtctccagcttcagcaacatcgactcccagtttggcttgtcgaagcagtc 959 Query: 800 atcattagagatgtccggcctggatgattacctgcagctgcagcaggactccatcgcttg 859 || | |||||| ||||| ||||||| | | ||||||| |||| |||||| |||| || Sbjct: 960 gtcgctggagatggccggcatggatgacttcttgcagctccagccagactccgtcgcctg 1019 Query: 860 caaagtccgtgcaaagcgtggatgcgcgactcacccgcgaagcattgcggagagggaaag 919 || | ||| |||||||| || |||||||| |||||||| ||||| || |||||||| || Sbjct: 1020 cagggcccgggcaaagcgcggctgcgcgacgcacccgcggagcatcgctgagagggagag 1079 Query: 920 aagaacaaggattagcaagaggctgaagaagctgcaagtactcgtgcctaacatggacaa 979 ||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||| Sbjct: 1080 gagaacgaggattagcaagaggctgaagaagctgcaggatctcgtgccgaacatggacaa 1139 Query: 980 gcaaacaaatacgtcagacatgttggatcttgctgtacactacatcagagagctgcaggg 1039 |||||| ||||| ||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 1140 gcaaacgaatacatcagacatgttggatattgctgtaacctacatcaaggagcttcaggg 1199 Query: 1040 ccaagttgagaagctaaaacacgaccaagcgaactgcacttgctcaggcaaccacaactg 1099 ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| | || Sbjct: 1200 ccaagttgagaagctaaaacatgaccaagcaaactgcacttgctcaggcaagcacgattg 1259 Query: 1100 ctgaggctggagaaccagat 1119 |||||||||||||||||||| Sbjct: 1260 ctgaggctggagaaccagat 1279 Score = 155 bits (78), Expect = 6e-34 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 497 cgccggcgcgatggcacacaggaggctgagctcgcagtggagcttctcgaggcaggacct 556 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 606 cgccggcgcgatggcgcacaggaggctgagctcgcagtggagcttctcgcggcaggacct 665 Query: 557 gccgcagatatcggagatgggga---tcatacccgacatcggggagagcatc 605 ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 666 gccgcagatatcggagatgggcggcctcatccccgacatcggggagagcatc 717 Score = 107 bits (54), Expect = 1e-19 Identities = 66/70 (94%) Strand = Plus / Plus Query: 372 gtcccgctcttccggcacagcagctcccccgccgggctgctctcccgcctcatggccgac 431 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 484 gtcccgctcttccgccacagcagctcccccgccggcctcctctcccgcctcatggctgac 543 Query: 432 ccgcacggca 441 |||||||||| Sbjct: 544 ccgcacggca 553 Score = 93.7 bits (47), Expect = 2e-15 Identities = 73/81 (90%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 632 cggcgcgcagccctcctcctacctctcc---agaaacttctccgtgagctcgtgggacga 688 |||||||||| ||||||||| ||||||| || ||||||||| ||||||| |||||||| Sbjct: 762 cggcgcgcagtcctcctccttcctctcctccaggaacttctccatgagctcctgggacga 821 Query: 689 caccaactccatcatgttctc 709 ||||||||||||||||||||| Sbjct: 822 caccaactccatcatgttctc 842 Score = 87.7 bits (44), Expect = 1e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 212 cttctccggggagtcgtccgggctcacctcctgcgagtccagctgccggacg 263 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 327 cttctccgcggagtcgtcggggctcacctcctgcgagtccagctgccggacg 378 >gb|AC188038.1| Genomic sequence for Sorghum bicolor BAC clone SB_IBa82G24, complete sequence Length = 201654 Score = 165 bits (83), Expect = 6e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 636 gcgcagccctcctcctacctctccagaaacttctccgtgagctcgtgggacgacaccaac 695 |||||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 97652 gcgcagtcctcctcctacctctccaggaacttctccgtcagctcctgggacgacaccaac 97711 Query: 696 tccatcatgttctcctcgtcgagcaggaaggccaaagtggacgccgccgacgacatggtc 755 |||||||||||||| || | |||| |||| | || |||||| ||||||| ||||||||| Sbjct: 97712 tccatcatgttctcgtcccccagcaagaagcctaaggtggaccccgccgatgacatggtc 97771 Query: 756 actagcttcagcaacatcgactc 778 || |||||||||||||||||||| Sbjct: 97772 accagcttcagcaacatcgactc 97794 Score = 129 bits (65), Expect = 3e-26 Identities = 77/81 (95%) Strand = Plus / Plus Query: 525 agctcgcagtggagcttctcgaggcaggacctgccgcagatatcggagatggggatcata 584 |||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||| Sbjct: 97517 agctcgcagtggagcttctccaggcaggacctgccgcagatctccgagatggggatgata 97576 Query: 585 cccgacatcggggagagcatc 605 ||||||||||||||||||||| Sbjct: 97577 cccgacatcggggagagcatc 97597 Score = 121 bits (61), Expect = 8e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 807 gagatgtccggcctggatgattacctgcagctgcagcaggactccatcgcttgcaaagtc 866 |||||||||||| |||| || ||||||||| |||||||||||||| |||| |||| |||| Sbjct: 97924 gagatgtccggcatggacgactacctgcagatgcagcaggactccgtcgcctgcagagtc 97983 Query: 867 cgtgcaaagcgtggatgcgcgactcacccgcgaagcattgcggagaggg 915 ||||| |||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct: 97984 cgtgccaagcgtggctgcgcaactcacccgcggagcattgccgagaggg 98032 Score = 111 bits (56), Expect = 8e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 376 cgctcttccggcacagcagctcccccgccgggctgctctcccgcctcatggccgacccgc 435 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94986 cgctgttccgccacagcagctcccccgccgggctgctctcccgcctcatggccgacccgc 95045 Query: 436 acgg 439 |||| Sbjct: 95046 acgg 95049 Score = 107 bits (54), Expect = 1e-19 Identities = 142/171 (83%), Gaps = 9/171 (5%) Strand = Plus / Plus Query: 99 gggctggcgcgctatggctccgcgccgggatcactcctcgcggccatcgccgactccgtc 158 ||||||||||| || |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 94697 gggctggcgcggtacggctccgcgccgggctcgctcctggccgccatcgccgagtccgtg 94756 Query: 159 acccgcggcggcgaggcggccccgctggcgccgccgggggccgtgagccggttcttctcc 218 |||||||| || |||||| | |||||||| | ||||||||||||||| |||| Sbjct: 94757 acccgcgg--------cgaccccgc-gccgccgccgccgcccgtgagccggttctactcc 94807 Query: 219 ggggagtcgtccgggctcacctcctgcgagtccagctgccggacggacggc 269 | ||||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 94808 gccgagtcatcggggctcacctcctgcgagtccagctgccgcaccgacggc 94858 Score = 101 bits (51), Expect = 8e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 914 ggaaagaagaacaaggattagcaagaggctgaagaagctgcaagtactcgtgcctaacat 973 |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 98210 ggaaagaagaacaaggattagcaagaggctgaagaagctgcaagatcttgtgcccaacat 98269 Query: 974 ggacaag 980 ||||||| Sbjct: 98270 ggacaag 98276 Score = 87.7 bits (44), Expect = 1e-13 Identities = 53/56 (94%) Strand = Plus / Plus Query: 979 agcaaacaaatacgtcagacatgttggatcttgctgtacactacatcagagagctg 1034 |||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| Sbjct: 98393 agcaaacaaatacgtcagacatgttggatcttgctgtagattacatcaaagagctg 98448 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 155 bits (78), Expect = 6e-34 Identities = 104/112 (92%), Gaps = 3/112 (2%) Strand = Plus / Plus Query: 497 cgccggcgcgatggcacacaggaggctgagctcgcagtggagcttctcgaggcaggacct 556 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 39208269 cgccggcgcgatggcgcacaggaggctgagctcgcagtggagcttctcgcggcaggacct 39208328 Query: 557 gccgcagatatcggagatgggga---tcatacccgacatcggggagagcatc 605 ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 39208329 gccgcagatatcggagatgggcggcctcatccccgacatcggggagagcatc 39208380 Score = 103 bits (52), Expect = 2e-18 Identities = 64/68 (94%) Strand = Plus / Plus Query: 372 gtcccgctcttccggcacagcagctcccccgccgggctgctctcccgcctcatggccgac 431 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 39205065 gtcccgctcttccgccacagcagctcccccgccggcctcctctcccgcctcatggctgac 39205124 Query: 432 ccgcacgg 439 |||||||| Sbjct: 39205125 ccgcacgg 39205132 Score = 103 bits (52), Expect = 2e-18 Identities = 67/72 (93%) Strand = Plus / Plus Query: 1048 agaagctaaaacacgaccaagcgaactgcacttgctcaggcaaccacaactgctgaggct 1107 ||||||||||||| |||||||| |||||||||||||||||||| ||| | |||||||||| Sbjct: 39209400 agaagctaaaacatgaccaagcaaactgcacttgctcaggcaagcacgattgctgaggct 39209459 Query: 1108 ggagaaccagat 1119 |||||||||||| Sbjct: 39209460 ggagaaccagat 39209471 Score = 93.7 bits (47), Expect = 2e-15 Identities = 73/81 (90%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 632 cggcgcgcagccctcctcctacctctcc---agaaacttctccgtgagctcgtgggacga 688 |||||||||| ||||||||| ||||||| || ||||||||| ||||||| |||||||| Sbjct: 39208425 cggcgcgcagtcctcctccttcctctcctccaggaacttctccatgagctcctgggacga 39208484 Query: 689 caccaactccatcatgttctc 709 ||||||||||||||||||||| Sbjct: 39208485 caccaactccatcatgttctc 39208505 Score = 87.7 bits (44), Expect = 1e-13 Identities = 50/52 (96%) Strand = Plus / Plus Query: 212 cttctccggggagtcgtccgggctcacctcctgcgagtccagctgccggacg 263 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 39204908 cttctccgcggagtcgtcggggctcacctcctgcgagtccagctgccggacg 39204959 Score = 79.8 bits (40), Expect = 3e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 921 agaacaaggattagcaagaggctgaagaagctgcaagtactcgtgcctaacatggacaag 980 ||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||| Sbjct: 39208942 agaacgaggattagcaagaggctgaagaagctgcaggatctcgtgccgaacatggacaag 39209001