BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst026p09 (475 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT834820.1| Oryza sativa (indica cultivar-group) cDNA clone:... 200 4e-48 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48 dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48 dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48 gb|AY109589.1| Zea mays CL7475_1 mRNA sequence 117 4e-23 >emb|CT834820.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA242F02, full insert sequence Length = 2202 Score = 200 bits (101), Expect = 4e-48 Identities = 119/125 (95%) Strand = Plus / Plus Query: 24 tagcttgcatctaggtggttaaggctctaaggagagcctgtgcccctcatcagagacagg 83 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1775 tagcttgcatctaggtggttaaggctctaaggagagcctgtgccccttgtcagagacagg 1834 Query: 84 ttcaaaggagtgctaatgtttgtttttggcacttagcgctacctcctgtcgtttctaaca 143 |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1835 ttcagaggagtgctaatgtttgtttttggcacttagtgctacctcctgtcatttctaaca 1894 Query: 144 cagtg 148 |||| Sbjct: 1895 tagtg 1899 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 253 cagagagacacctcaatggttttaaatgtactattatcggacatggtggttgtaataata 312 |||||||| |||| |||| |||| |||||||||||||||||||||||| ||||||||||| Sbjct: 2116 cagagagaaaccttaatgctttttaatgtactattatcggacatggtgattgtaataata 2175 Query: 313 aagtag 318 |||||| Sbjct: 2176 aagtag 2181 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 200 bits (101), Expect = 4e-48 Identities = 119/125 (95%) Strand = Plus / Plus Query: 24 tagcttgcatctaggtggttaaggctctaaggagagcctgtgcccctcatcagagacagg 83 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 38047186 tagcttgcatctaggtggttaaggctctaaggagagcctgtgccccttgtcagagacagg 38047245 Query: 84 ttcaaaggagtgctaatgtttgtttttggcacttagcgctacctcctgtcgtttctaaca 143 |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 38047246 ttcagaggagtgctaatgtttgtttttggcacttagtgctacctcctgtcatttctaaca 38047305 Query: 144 cagtg 148 |||| Sbjct: 38047306 tagtg 38047310 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 253 cagagagacacctcaatggttttaaatgtactattatcggacatggtggttgtaataata 312 |||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||| Sbjct: 38047527 cagagagaagccttaatgctttttaatgtactattatcggacatggtgattgtaataata 38047586 Query: 313 aagtagcactatgctacttctaggacaagcag 344 |||||| ||| || |||| |||||||||||| Sbjct: 38047587 aagtagtactgtgacacttttaggacaagcag 38047618 >dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 200 bits (101), Expect = 4e-48 Identities = 119/125 (95%) Strand = Plus / Plus Query: 24 tagcttgcatctaggtggttaaggctctaaggagagcctgtgcccctcatcagagacagg 83 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 128130 tagcttgcatctaggtggttaaggctctaaggagagcctgtgccccttgtcagagacagg 128189 Query: 84 ttcaaaggagtgctaatgtttgtttttggcacttagcgctacctcctgtcgtttctaaca 143 |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 128190 ttcagaggagtgctaatgtttgtttttggcacttagtgctacctcctgtcatttctaaca 128249 Query: 144 cagtg 148 |||| Sbjct: 128250 tagtg 128254 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 253 cagagagacacctcaatggttttaaatgtactattatcggacatggtggttgtaataata 312 |||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||| Sbjct: 128471 cagagagaagccttaatgctttttaatgtactattatcggacatggtgattgtaataata 128530 Query: 313 aagtagcactatgctacttctaggacaagcag 344 |||||| ||| || |||| |||||||||||| Sbjct: 128531 aagtagtactgtgacacttttaggacaagcag 128562 >dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 200 bits (101), Expect = 4e-48 Identities = 119/125 (95%) Strand = Plus / Plus Query: 24 tagcttgcatctaggtggttaaggctctaaggagagcctgtgcccctcatcagagacagg 83 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 15220 tagcttgcatctaggtggttaaggctctaaggagagcctgtgccccttgtcagagacagg 15279 Query: 84 ttcaaaggagtgctaatgtttgtttttggcacttagcgctacctcctgtcgtttctaaca 143 |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 15280 ttcagaggagtgctaatgtttgtttttggcacttagtgctacctcctgtcatttctaaca 15339 Query: 144 cagtg 148 |||| Sbjct: 15340 tagtg 15344 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 253 cagagagacacctcaatggttttaaatgtactattatcggacatggtggttgtaataata 312 |||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||| Sbjct: 15561 cagagagaagccttaatgctttttaatgtactattatcggacatggtgattgtaataata 15620 Query: 313 aagtagcactatgctacttctaggacaagcag 344 |||||| ||| || |||| |||||||||||| Sbjct: 15621 aagtagtactgtgacacttttaggacaagcag 15652 >gb|AY109589.1| Zea mays CL7475_1 mRNA sequence Length = 1284 Score = 117 bits (59), Expect = 4e-23 Identities = 96/110 (87%) Strand = Plus / Minus Query: 24 tagcttgcatctaggtggttaaggctctaaggagagcctgtgcccctcatcagagacagg 83 ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||| Sbjct: 548 tagcttgcatctaggtggtcaaggctctaaggagagcctgtgcccctaatcagacacagg 489 Query: 84 ttcaaaggagtgctaatgtttgtttttggcacttagcgctacctcctgtc 133 |||| || |||||||||||||| || ||| || |||||||||||| Sbjct: 488 ttcagagtagtgctaatgtttgnnnnnagcccttggcactacctcctgtc 439