BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst026m01 (635 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY846819.1| Triticum aestivum ribosomal protein L36 mRNA, com... 521 e-144 gb|DQ244882.1| Zea mays clone 11506 mRNA sequence 505 e-140 gb|DQ244865.1| Zea mays clone 11257 mRNA sequence 505 e-140 dbj|AK242641.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 442 e-121 emb|CT829260.1| Oryza sativa (indica cultivar-group) cDNA clone:... 422 e-115 >gb|AY846819.1| Triticum aestivum ribosomal protein L36 mRNA, complete cds Length = 406 Score = 521 bits (263), Expect = e-144 Identities = 311/327 (95%) Strand = Plus / Plus Query: 43 aggagcgagcgggagaccggccatggcgccgtcgcagcccaagtcggggctcttcgtggg 102 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 46 aggagcgagtgggagtccggccatggcgccgtcgcagcccaagtcagggctcttcgtggg 105 Query: 103 catcaacaagggccacgtcgtcaccaagcgcgagctgccgcctcgcccgtccgaccgcaa 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 catcaacaagggccacgtcgtcaccaagcgcgagctgccgcctcgcccgtccgaccgcaa 165 Query: 163 ggggaaaattaccaagagggtgcagtttgtcaggaacttgattagggaagttgctggatt 222 ||||||| ||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 166 ggggaaaggtacaaagagggtgcattttgtcaggaacttgatcagggaggttgctggatt 225 Query: 223 tgctccctatgagaagcgcatcactgagcttcttaaggttgggaaggacaagcgtgcact 282 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 226 tgctccctatgagaagcgtatcactgagcttcttaaggttggaaaggacaagcgtgcact 285 Query: 283 caaggtggccaagagaaagcttggtactcacaagagagcaaagaagaagagagaggagat 342 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 caaggtcgccaagagaaagcttggtactcacaagagagcaaagaagaagagagaggagat 345 Query: 343 ggcgaatgtcctcaggaagatgaggtc 369 | | | |||||| |||||||||||||| Sbjct: 346 gtcaagtgtccttaggaagatgaggtc 372 >gb|DQ244882.1| Zea mays clone 11506 mRNA sequence Length = 659 Score = 505 bits (255), Expect = e-140 Identities = 309/327 (94%) Strand = Plus / Plus Query: 43 aggagcgagcgggagaccggccatggcgccgtcgcagcccaagtcggggctcttcgtggg 102 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 58 aggagcgagtgggagtccggccatggcgccgtcgcagcccaagtcagggctcttcgtggg 117 Query: 103 catcaacaagggccacgtcgtcaccaagcgcgagctgccgcctcgcccgtccgaccgcaa 162 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118 catcaacaagggccacgtcgtcaccaagcgcgagctgccgccacgcccgtccgaccgcaa 177 Query: 163 ggggaaaattaccaagagggtgcagtttgtcaggaacttgattagggaagttgctggatt 222 ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 178 ggggaaaggtaccaagagggtgcattttgtcaggaacttgattagggaggttgctggatt 237 Query: 223 tgctccctatgagaagcgcatcactgagcttcttaaggttgggaaggacaagcgtgcact 282 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 238 cgctccctatgagaaacgtatcactgagcttcttaaggttggaaaggacaagcgcgcact 297 Query: 283 caaggtggccaagagaaagcttggtactcacaagagagcaaagaagaagagagaggagat 342 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 caaggtcgccaagagaaagcttggtactcacaagagagcaaagaagaagagagaggagat 357 Query: 343 ggcgaatgtcctcaggaagatgaggtc 369 | | | |||||| |||||||||||||| Sbjct: 358 gtcaagtgtccttaggaagatgaggtc 384 >gb|DQ244865.1| Zea mays clone 11257 mRNA sequence Length = 685 Score = 505 bits (255), Expect = e-140 Identities = 309/327 (94%) Strand = Plus / Plus Query: 43 aggagcgagcgggagaccggccatggcgccgtcgcagcccaagtcggggctcttcgtggg 102 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 58 aggagcgagtgggagtccggccatggcgccgtcgcagcccaagtcagggctcttcgtggg 117 Query: 103 catcaacaagggccacgtcgtcaccaagcgcgagctgccgcctcgcccgtccgaccgcaa 162 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118 catcaacaagggccacgtcgtcaccaagcgcgagctgccgccacgcccgtccgaccgcaa 177 Query: 163 ggggaaaattaccaagagggtgcagtttgtcaggaacttgattagggaagttgctggatt 222 ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 178 ggggaaaggtaccaagagggtgcattttgtcaggaacttgattagggaggttgctggatt 237 Query: 223 tgctccctatgagaagcgcatcactgagcttcttaaggttgggaaggacaagcgtgcact 282 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 238 cgctccctatgagaaacgtatcactgagcttcttaaggttggaaaggacaagcgcgcact 297 Query: 283 caaggtggccaagagaaagcttggtactcacaagagagcaaagaagaagagagaggagat 342 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 caaggtcgccaagagaaagcttggtactcacaagagagcaaagaagaagagagaggagat 357 Query: 343 ggcgaatgtcctcaggaagatgaggtc 369 | | | |||||| |||||||||||||| Sbjct: 358 gtcaagtgtccttaggaagatgaggtc 384 >dbj|AK242641.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090024F23, full insert sequence Length = 3096 Score = 442 bits (223), Expect = e-121 Identities = 328/363 (90%) Strand = Plus / Plus Query: 31 atccaaggttagaggagcgagcgggagaccggccatggcgccgtcgcagcccaagtcggg 90 ||||||||| |||||||||| ||||| | |||||||||||| |||||||||||||||| Sbjct: 2520 atccaaggtccgaggagcgaggaggagatccgccatggcgccgccgcagcccaagtcggg 2579 Query: 91 gctcttcgtgggcatcaacaagggccacgtcgtcaccaagcgcgagctgccgcctcgccc 150 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2580 gctcttcgtcggcatcaacaagggccacgtcgtcaccaagcgcgagctgccacctcgccc 2639 Query: 151 gtccgaccgcaaggggaaaattaccaagagggtgcagtttgtcaggaacttgattaggga 210 |||||||||||||||||||| ||||||||| ||| | ||||||||| |||||||||||| Sbjct: 2640 gtccgaccgcaaggggaaaagtaccaagagagtgaattttgtcaggggcttgattaggga 2699 Query: 211 agttgctggatttgctccctatgagaagcgcatcactgagcttcttaaggttgggaagga 270 |||| ||||||||||| |||||||| || |||||||||||||| |||||||| ||||| Sbjct: 2700 ggttgtgggatttgctccatatgagaaacgaatcactgagcttctgaaggttggaaagga 2759 Query: 271 caagcgtgcactcaaggtggccaagagaaagcttggtactcacaagagagcaaagaagaa 330 |||||||||||| ||||| || ||||||||||| ||||| |||||||||||||||||||| Sbjct: 2760 caagcgtgcactgaaggtcgctaagagaaagctcggtacccacaagagagcaaagaagaa 2819 Query: 331 gagagaggagatggcgaatgtcctcaggaagatgaggtcagcgggtgttactgacaagaa 390 |||||||||||||||| |||| |||||||||||||||| || ||| |||||||||||| Sbjct: 2820 gagagaggagatggcgggtgtcatcaggaagatgaggtctgctggtactactgacaagaa 2879 Query: 391 gaa 393 ||| Sbjct: 2880 gaa 2882 >emb|CT829260.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI021A20, full insert sequence Length = 579 Score = 422 bits (213), Expect = e-115 Identities = 282/305 (92%) Strand = Plus / Plus Query: 65 atggcgccgtcgcagcccaagtcggggctcttcgtgggcatcaacaagggccacgtcgtc 124 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 50 atggcgccgtcgcagccgaagtccgggctcttcgtgggcatcaacaagggccacgtcgtc 109 Query: 125 accaagcgcgagctgccgcctcgcccgtccgaccgcaaggggaaaattaccaagagggtg 184 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110 accaagcgcgagctgccgcctcgcccgtccgaccgcaaggggaaatccaccaagagggtg 169 Query: 185 cagtttgtcaggaacttgattagggaagttgctggatttgctccctatgagaagcgcatc 244 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct: 170 acctttgtcaggaacttgatcagggaggttgctggatttgctccctatgagaagcgtatc 229 Query: 245 actgagcttcttaaggttgggaaggacaagcgtgcactcaaggtggccaagagaaagctt 304 ||||||||||| || ||||| ||||||||||||||||| |||||||| |||||||||||| Sbjct: 230 actgagcttctcaaagttggcaaggacaagcgtgcactgaaggtggcaaagagaaagctt 289 Query: 305 ggtactcacaagagagcaaagaagaagagagaggagatggcgaatgtcctcaggaagatg 364 || || |||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct: 290 ggcacccacaagagggccaagaagaagagagaggagatggctggtgtcctcaggaagatg 349 Query: 365 aggtc 369 ||||| Sbjct: 350 aggtc 354