BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst026i04 (1168 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001063788.1| Oryza sativa (japonica cultivar-group) Os06g... 442 e-120 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51 dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51 dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51 >ref|NM_001063788.1| Oryza sativa (japonica cultivar-group) Os06g0237900 (Os06g0237900) mRNA, complete cds Length = 828 Score = 442 bits (223), Expect = e-120 Identities = 345/385 (89%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 301 ctccgcctcccaccgtcctcgacgggctcgtcaccaccctcctctcccagaacaccaccg 360 ||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 416 ctccgccgcccaccgtcctcgacggcctcgtcacgaccctcctctctcagaacaccaccg 475 Query: 361 acgccatctcccgccgcgcgttcgcctccctcaaggcggccttcccctcctgggaccagg 420 |||||||||| |||||||| |||||| |||||||||| || |||||| |||||||||||| Sbjct: 476 acgccatctcgcgccgcgccttcgccgccctcaaggccgcgttccccacctgggaccagg 535 Query: 421 tggtggatgagg---aggggaagatgctggaggacgccatccggtgcgggggccttgcgg 477 |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 536 tggtggatgaggaggaggggaagaggctggaggacgccatccggtgcggggggcttgcgg 595 Query: 478 cgacgaaggcggcgaggatccggaccatgctgcggggcgtgagggagaggaggggcaaga 537 ||||||||||||||||||| || | |||||| ||||||| |||||||| | ||||||| Sbjct: 596 cgacgaaggcggcgaggataagggcgatgctgaggggcgtccgggagaggcgaggcaaga 655 Query: 538 tttgcctcgagtacctgcgtgaactgtcagtggatgaggtgaagagggagctctcgcaat 597 ||||||||||||| |||| || ||||| |||||||||||||||| ||||| || | | Sbjct: 656 tttgcctcgagtatttgcgggatctgtccgtggatgaggtgaagactgagctatctcggt 715 Query: 598 tcaaagggatcgggccaaagactgtggcatgcgtgctgatgttctatcttcaaaaggatg 657 |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| Sbjct: 716 tcaaagggatcgggccaaagactgtggcgtgtgtgctgatgttctatcttcagaaggatg 775 Query: 658 attttccagtagatacccatgtact 682 |||||||||||||||| ||| |||| Sbjct: 776 attttccagtagatactcatctact 800 Score = 137 bits (69), Expect = 1e-28 Identities = 84/89 (94%) Strand = Plus / Plus Query: 164 ccaccgctctccctccccagcccaatgcctagccgtccgcgacgccctcctcgccttcca 223 ||||| ||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 258 ccacccctccccttcccccgcccaatgcctcgccgtccgcgacgccctcctcgccttcca 317 Query: 224 cggcttccccgacgagttcgcgcccttcc 252 ||||||||||||||||||||||||||||| Sbjct: 318 cggcttccccgacgagttcgcgcccttcc 346 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 212 bits (107), Expect = 2e-51 Identities = 173/195 (88%) Strand = Plus / Minus Query: 429 gaggaggggaagatgctggaggacgccatccggtgcgggggccttgcggcgacgaaggcg 488 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 7182847 gaggaggggaagaggctggaggacgccatccggtgcggggggcttgcggcgacgaaggcg 7182788 Query: 489 gcgaggatccggaccatgctgcggggcgtgagggagaggaggggcaagatttgcctcgag 548 |||||||| || | |||||| ||||||| |||||||| | |||||||||||||||||| Sbjct: 7182787 gcgaggataagggcgatgctgaggggcgtccgggagaggcgaggcaagatttgcctcgag 7182728 Query: 549 tacctgcgtgaactgtcagtggatgaggtgaagagggagctctcgcaattcaaagggatc 608 || |||| || ||||| |||||||||||||||| ||||| || | |||||||||||| Sbjct: 7182727 tatttgcgggatctgtccgtggatgaggtgaagactgagctatctcggttcaaagggatc 7182668 Query: 609 gggccaaagactgtg 623 ||||||||||||||| Sbjct: 7182667 gggccaaagactgtg 7182653 Score = 204 bits (103), Expect = 6e-49 Identities = 208/243 (85%) Strand = Plus / Minus Query: 678 gtactccgcattacaaaggctattggttgggttcctgcaacagctactagggagaaggca 737 |||||||| |||||||| |||||||||||||||||||||||||||| || |||| |||| Sbjct: 7181756 gtactccgtattacaaacgctattggttgggttcctgcaacagctagcagagagagggca 7181697 Query: 738 tacattcatctgaataataaaattcctgatgatctgaagtttgacttgaactgtctattt 797 || |||||||||| | ||||||||||||||||| || ||||| |||| ||||||||| Sbjct: 7181696 tatcttcatctgaacagcaaaattcctgatgatctaaaatttgatctgaattgtctattt 7181637 Query: 798 gttactcatgggaagctttgtcaatcatgtaccaaaaagttaggaggccagaaaaccaag 857 || |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 7181636 gtaactcatggaaagctctgtcaatcatgttccaaaaagttaggaggccagaaaaccacc 7181577 Query: 858 ggtgccaatgctgcttgtcccctagcaagttcatgttgtattgaagaaaagatgcagcca 917 ||| | ||| || || ||||||||||||| ||||| | ||||||||||||| ||| | Sbjct: 7181576 ggttcaaattctatgtgccccctagcaagttattgttgcactgaagaaaagatgaagcaa 7181517 Query: 918 tag 920 ||| Sbjct: 7181516 tag 7181514 Score = 161 bits (81), Expect = 8e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 301 ctccgcctcccaccgtcctcgacgggctcgtcaccaccctcctctcccagaacaccaccg 360 ||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 7183055 ctccgccgcccaccgtcctcgacggcctcgtcacgaccctcctctctcagaacaccaccg 7182996 Query: 361 acgccatctcccgccgcgcgttcgcctccctcaaggcggccttcccctcctgggaccagg 420 |||||||||| |||||||| |||||| |||||||||| || |||||| |||||||||||| Sbjct: 7182995 acgccatctcgcgccgcgccttcgccgccctcaaggccgcgttccccacctgggaccagg 7182936 Query: 421 t 421 | Sbjct: 7182935 t 7182935 Score = 137 bits (69), Expect = 1e-28 Identities = 84/89 (94%) Strand = Plus / Minus Query: 164 ccaccgctctccctccccagcccaatgcctagccgtccgcgacgccctcctcgccttcca 223 ||||| ||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7183213 ccacccctccccttcccccgcccaatgcctcgccgtccgcgacgccctcctcgccttcca 7183154 Query: 224 cggcttccccgacgagttcgcgcccttcc 252 ||||||||||||||||||||||||||||| Sbjct: 7183153 cggcttccccgacgagttcgcgcccttcc 7183125 Score = 87.7 bits (44), Expect = 9e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 621 gtggcatgcgtgctgatgttctatcttcaaaaggatgattttccagtagatacccatgta 680 ||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 7181903 gtggcgtgtgtgctgatgttctatcttcagaaggatgattttccagtagatactcatgta 7181844 >dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 212 bits (107), Expect = 2e-51 Identities = 173/195 (88%) Strand = Plus / Minus Query: 429 gaggaggggaagatgctggaggacgccatccggtgcgggggccttgcggcgacgaaggcg 488 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 60258 gaggaggggaagaggctggaggacgccatccggtgcggggggcttgcggcgacgaaggcg 60199 Query: 489 gcgaggatccggaccatgctgcggggcgtgagggagaggaggggcaagatttgcctcgag 548 |||||||| || | |||||| ||||||| |||||||| | |||||||||||||||||| Sbjct: 60198 gcgaggataagggcgatgctgaggggcgtccgggagaggcgaggcaagatttgcctcgag 60139 Query: 549 tacctgcgtgaactgtcagtggatgaggtgaagagggagctctcgcaattcaaagggatc 608 || |||| || ||||| |||||||||||||||| ||||| || | |||||||||||| Sbjct: 60138 tatttgcgggatctgtccgtggatgaggtgaagactgagctatctcggttcaaagggatc 60079 Query: 609 gggccaaagactgtg 623 ||||||||||||||| Sbjct: 60078 gggccaaagactgtg 60064 Score = 204 bits (103), Expect = 6e-49 Identities = 208/243 (85%) Strand = Plus / Minus Query: 678 gtactccgcattacaaaggctattggttgggttcctgcaacagctactagggagaaggca 737 |||||||| |||||||| |||||||||||||||||||||||||||| || |||| |||| Sbjct: 59167 gtactccgtattacaaacgctattggttgggttcctgcaacagctagcagagagagggca 59108 Query: 738 tacattcatctgaataataaaattcctgatgatctgaagtttgacttgaactgtctattt 797 || |||||||||| | ||||||||||||||||| || ||||| |||| ||||||||| Sbjct: 59107 tatcttcatctgaacagcaaaattcctgatgatctaaaatttgatctgaattgtctattt 59048 Query: 798 gttactcatgggaagctttgtcaatcatgtaccaaaaagttaggaggccagaaaaccaag 857 || |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 59047 gtaactcatggaaagctctgtcaatcatgttccaaaaagttaggaggccagaaaaccacc 58988 Query: 858 ggtgccaatgctgcttgtcccctagcaagttcatgttgtattgaagaaaagatgcagcca 917 ||| | ||| || || ||||||||||||| ||||| | ||||||||||||| ||| | Sbjct: 58987 ggttcaaattctatgtgccccctagcaagttattgttgcactgaagaaaagatgaagcaa 58928 Query: 918 tag 920 ||| Sbjct: 58927 tag 58925 Score = 161 bits (81), Expect = 8e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 301 ctccgcctcccaccgtcctcgacgggctcgtcaccaccctcctctcccagaacaccaccg 360 ||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 60466 ctccgccgcccaccgtcctcgacggcctcgtcacgaccctcctctctcagaacaccaccg 60407 Query: 361 acgccatctcccgccgcgcgttcgcctccctcaaggcggccttcccctcctgggaccagg 420 |||||||||| |||||||| |||||| |||||||||| || |||||| |||||||||||| Sbjct: 60406 acgccatctcgcgccgcgccttcgccgccctcaaggccgcgttccccacctgggaccagg 60347 Query: 421 t 421 | Sbjct: 60346 t 60346 Score = 137 bits (69), Expect = 1e-28 Identities = 84/89 (94%) Strand = Plus / Minus Query: 164 ccaccgctctccctccccagcccaatgcctagccgtccgcgacgccctcctcgccttcca 223 ||||| ||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 60624 ccacccctccccttcccccgcccaatgcctcgccgtccgcgacgccctcctcgccttcca 60565 Query: 224 cggcttccccgacgagttcgcgcccttcc 252 ||||||||||||||||||||||||||||| Sbjct: 60564 cggcttccccgacgagttcgcgcccttcc 60536 Score = 87.7 bits (44), Expect = 9e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 621 gtggcatgcgtgctgatgttctatcttcaaaaggatgattttccagtagatacccatgta 680 ||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 59314 gtggcgtgtgtgctgatgttctatcttcagaaggatgattttccagtagatactcatgta 59255 >dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 212 bits (107), Expect = 2e-51 Identities = 173/195 (88%) Strand = Plus / Minus Query: 429 gaggaggggaagatgctggaggacgccatccggtgcgggggccttgcggcgacgaaggcg 488 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 17851 gaggaggggaagaggctggaggacgccatccggtgcggggggcttgcggcgacgaaggcg 17792 Query: 489 gcgaggatccggaccatgctgcggggcgtgagggagaggaggggcaagatttgcctcgag 548 |||||||| || | |||||| ||||||| |||||||| | |||||||||||||||||| Sbjct: 17791 gcgaggataagggcgatgctgaggggcgtccgggagaggcgaggcaagatttgcctcgag 17732 Query: 549 tacctgcgtgaactgtcagtggatgaggtgaagagggagctctcgcaattcaaagggatc 608 || |||| || ||||| |||||||||||||||| ||||| || | |||||||||||| Sbjct: 17731 tatttgcgggatctgtccgtggatgaggtgaagactgagctatctcggttcaaagggatc 17672 Query: 609 gggccaaagactgtg 623 ||||||||||||||| Sbjct: 17671 gggccaaagactgtg 17657 Score = 204 bits (103), Expect = 6e-49 Identities = 208/243 (85%) Strand = Plus / Minus Query: 678 gtactccgcattacaaaggctattggttgggttcctgcaacagctactagggagaaggca 737 |||||||| |||||||| |||||||||||||||||||||||||||| || |||| |||| Sbjct: 16760 gtactccgtattacaaacgctattggttgggttcctgcaacagctagcagagagagggca 16701 Query: 738 tacattcatctgaataataaaattcctgatgatctgaagtttgacttgaactgtctattt 797 || |||||||||| | ||||||||||||||||| || ||||| |||| ||||||||| Sbjct: 16700 tatcttcatctgaacagcaaaattcctgatgatctaaaatttgatctgaattgtctattt 16641 Query: 798 gttactcatgggaagctttgtcaatcatgtaccaaaaagttaggaggccagaaaaccaag 857 || |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 16640 gtaactcatggaaagctctgtcaatcatgttccaaaaagttaggaggccagaaaaccacc 16581 Query: 858 ggtgccaatgctgcttgtcccctagcaagttcatgttgtattgaagaaaagatgcagcca 917 ||| | ||| || || ||||||||||||| ||||| | ||||||||||||| ||| | Sbjct: 16580 ggttcaaattctatgtgccccctagcaagttattgttgcactgaagaaaagatgaagcaa 16521 Query: 918 tag 920 ||| Sbjct: 16520 tag 16518 Score = 161 bits (81), Expect = 8e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 301 ctccgcctcccaccgtcctcgacgggctcgtcaccaccctcctctcccagaacaccaccg 360 ||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 18059 ctccgccgcccaccgtcctcgacggcctcgtcacgaccctcctctctcagaacaccaccg 18000 Query: 361 acgccatctcccgccgcgcgttcgcctccctcaaggcggccttcccctcctgggaccagg 420 |||||||||| |||||||| |||||| |||||||||| || |||||| |||||||||||| Sbjct: 17999 acgccatctcgcgccgcgccttcgccgccctcaaggccgcgttccccacctgggaccagg 17940 Query: 421 t 421 | Sbjct: 17939 t 17939 Score = 137 bits (69), Expect = 1e-28 Identities = 84/89 (94%) Strand = Plus / Minus Query: 164 ccaccgctctccctccccagcccaatgcctagccgtccgcgacgccctcctcgccttcca 223 ||||| ||| || ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 18217 ccacccctccccttcccccgcccaatgcctcgccgtccgcgacgccctcctcgccttcca 18158 Query: 224 cggcttccccgacgagttcgcgcccttcc 252 ||||||||||||||||||||||||||||| Sbjct: 18157 cggcttccccgacgagttcgcgcccttcc 18129 Score = 87.7 bits (44), Expect = 9e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 621 gtggcatgcgtgctgatgttctatcttcaaaaggatgattttccagtagatacccatgta 680 ||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 16907 gtggcgtgtgtgctgatgttctatcttcagaaggatgattttccagtagatactcatgta 16848