BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst026b21 (612 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057824.1| Oryza sativa (japonica cultivar-group) Os03g... 464 e-127 dbj|AK062777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 464 e-127 gb|AY106778.1| Zea mays PCO115518 mRNA sequence 436 e-119 gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom... 161 4e-36 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36 >ref|NM_001057824.1| Oryza sativa (japonica cultivar-group) Os03g0751000 (Os03g0751000) mRNA, complete cds Length = 574 Score = 464 bits (234), Expect = e-127 Identities = 377/423 (89%), Gaps = 10/423 (2%) Strand = Plus / Plus Query: 111 gatccgatgctgtggcacaaggtggccgccgtctccggggttgctgctcttggacttggc 170 ||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||| Sbjct: 91 gatccgagcctgtggcacaaggtggccgccatatccggggttgctgcccttggacttggc 150 Query: 171 acctatggagcgcacatgttccgccccaagaaccctgcttacaaggaggtttggcacacc 230 |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 151 acctatggcgcgcacatgttccgccccaagaaccccgcgtacaaggaggtttggcacact 210 Query: 231 gcgtccctctaccatctcgtccacaccgcggcgttgctcggggctcccatcgtcaagcgc 290 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 211 gcgtccctctaccatctcgtccacaccgcggcgttgctcggggctcccatcaccaagcgc 270 Query: 291 cccaacatcttcggagggcttcttaccgctggaattgtgctattctctggaacgtgctac 350 ||| | | || |||||||||||||| ||||| ||||| || |||||||||||||||||| Sbjct: 271 cccgatgtttttggagggcttcttactgctgggattgttctcttctctggaacgtgctac 330 Query: 351 actgtggcttatctcgaagacaggaagttttcttcaccagcaccattgggtggctttgca 410 |||||||||||||| ||||||||||||| |||||| | ||||| |||||||||||||| Sbjct: 331 actgtggcttatcttgaagacaggaagtattcttccacggcaccgttgggtggctttgcg 390 Query: 411 ttcattgctgcttgggccagtctgctcttctgattatatcgtgtattcgtgttttagcct 470 ||||| |||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 391 ttcatcgctgcttgggccagtctgctcttctgattatatc--------gtgttttagcat 442 Query: 471 gtgaaaacattatctacattactgaaagctttgtatttgctgctttattaggtcatgcaa 530 |||||||| ||| |||||||||||| |||||||||||| ||| ||| || |||||||| Sbjct: 443 gtgaaaac-gtat-tacattactgaatgctttgtatttggtgccctatcagttcatgcaa 500 Query: 531 ttg 533 ||| Sbjct: 501 ttg 503 >dbj|AK062777.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-A10, full insert sequence Length = 574 Score = 464 bits (234), Expect = e-127 Identities = 377/423 (89%), Gaps = 10/423 (2%) Strand = Plus / Plus Query: 111 gatccgatgctgtggcacaaggtggccgccgtctccggggttgctgctcttggacttggc 170 ||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||| Sbjct: 91 gatccgagcctgtggcacaaggtggccgccatatccggggttgctgcccttggacttggc 150 Query: 171 acctatggagcgcacatgttccgccccaagaaccctgcttacaaggaggtttggcacacc 230 |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 151 acctatggcgcgcacatgttccgccccaagaaccccgcgtacaaggaggtttggcacact 210 Query: 231 gcgtccctctaccatctcgtccacaccgcggcgttgctcggggctcccatcgtcaagcgc 290 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 211 gcgtccctctaccatctcgtccacaccgcggcgttgctcggggctcccatcaccaagcgc 270 Query: 291 cccaacatcttcggagggcttcttaccgctggaattgtgctattctctggaacgtgctac 350 ||| | | || |||||||||||||| ||||| ||||| || |||||||||||||||||| Sbjct: 271 cccgatgtttttggagggcttcttactgctgggattgttctcttctctggaacgtgctac 330 Query: 351 actgtggcttatctcgaagacaggaagttttcttcaccagcaccattgggtggctttgca 410 |||||||||||||| ||||||||||||| |||||| | ||||| |||||||||||||| Sbjct: 331 actgtggcttatcttgaagacaggaagtattcttccacggcaccgttgggtggctttgcg 390 Query: 411 ttcattgctgcttgggccagtctgctcttctgattatatcgtgtattcgtgttttagcct 470 ||||| |||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 391 ttcatcgctgcttgggccagtctgctcttctgattatatc--------gtgttttagcat 442 Query: 471 gtgaaaacattatctacattactgaaagctttgtatttgctgctttattaggtcatgcaa 530 |||||||| ||| |||||||||||| |||||||||||| ||| ||| || |||||||| Sbjct: 443 gtgaaaac-gtat-tacattactgaatgctttgtatttggtgccctatcagttcatgcaa 500 Query: 531 ttg 533 ||| Sbjct: 501 ttg 503 >gb|AY106778.1| Zea mays PCO115518 mRNA sequence Length = 722 Score = 436 bits (220), Expect = e-119 Identities = 310/340 (91%) Strand = Plus / Plus Query: 107 gacggatccgatgctgtggcacaaggtggccgccgtctccggggttgctgctcttggact 166 |||||||||||||||||||||||||||||||||||||||||||||||| ||| | || || Sbjct: 128 gacggatccgatgctgtggcacaaggtggccgccgtctccggggttgccgctttggggct 187 Query: 167 tggcacctatggagcgcacatgttccgccccaagaaccctgcttacaaggaggtttggca 226 |||||||| || |||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 188 cggcacctacggcgcgcacatgttccgccccaagaaccccgcgtacaaagaggtttggca 247 Query: 227 caccgcgtccctctaccatctcgtccacaccgcggcgttgctcggggctcccatcgtcaa 286 ||| |||||||| |||||||||||||||||||||||| |||||||||| |||||| ||| Sbjct: 248 cacggcgtccctgtaccatctcgtccacaccgcggcgctgctcggggcgcccatcaccaa 307 Query: 287 gcgccccaacatcttcggagggcttcttaccgctggaattgtgctattctctggaacgtg 346 |||||||||| | ||||||||||| || || |||||||||||||| |||||||||||||| Sbjct: 308 gcgccccaacgttttcggagggctcctcactgctggaattgtgctcttctctggaacgtg 367 Query: 347 ctacactgtggcttatctcgaagacaggaagttttcttcaccagcaccattgggtggctt 406 |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 368 ctacaccgtggcttatcttgaagacaggaagttttcttcaccggcaccattggggggctt 427 Query: 407 tgcattcattgctgcttgggccagtctgctcttctgatta 446 ||| || ||||||||||||||||| || |||||||||||| Sbjct: 428 tgcgtttattgctgcttgggccagcctcctcttctgatta 467 >gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 161 bits (81), Expect = 4e-36 Identities = 164/190 (86%), Gaps = 10/190 (5%) Strand = Plus / Minus Query: 344 gtgctacactgtggcttatctcgaagacaggaagttttcttcaccagcaccattgggtgg 403 ||||||||||||||||||||| ||||||||||||| |||||| | ||||| |||||||| Sbjct: 104344 gtgctacactgtggcttatcttgaagacaggaagtattcttccacggcaccgttgggtgg 104285 Query: 404 ctttgcattcattgctgcttgggccagtctgctcttctgattatatcgtgtattcgtgtt 463 |||||| ||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 104284 ctttgcgttcatcgctgcttgggccagtctgctcttctgattatatc--------gtgtt 104233 Query: 464 ttagcctgtgaaaacattatctacattactgaaagctttgtatttgctgctttattaggt 523 ||||| ||||||||| ||| |||||||||||| |||||||||||| ||| ||| || | Sbjct: 104232 ttagcatgtgaaaac-gtat-tacattactgaatgctttgtatttggtgccctatcagtt 104175 Query: 524 catgcaattg 533 |||||||||| Sbjct: 104174 catgcaattg 104165 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Minus Query: 217 aggtttggcacaccgcgtccctctaccatctcgtccacaccgcggcgttgctcggggctc 276 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104699 aggtttggcacactgcgtccctctaccatctcgtccacaccgcggcgttgctcggggctc 104640 Query: 277 ccatcgtcaagcgcccc 293 ||||| |||||||||| Sbjct: 104639 ccatcaccaagcgcccc 104623 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 147 ggggttgctgctcttggacttggcacctatggagcgcacatgttccgccccaagaaccct 206 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 104885 ggggttgctgcccttggacttggcacctatggcgcgcacatgttccgccccaagaacccc 104826 Query: 207 gcttacaaggaggt 220 || ||||||||||| Sbjct: 104825 gcgtacaaggaggt 104812 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 161 bits (81), Expect = 4e-36 Identities = 164/190 (86%), Gaps = 10/190 (5%) Strand = Plus / Plus Query: 344 gtgctacactgtggcttatctcgaagacaggaagttttcttcaccagcaccattgggtgg 403 ||||||||||||||||||||| ||||||||||||| |||||| | ||||| |||||||| Sbjct: 30749470 gtgctacactgtggcttatcttgaagacaggaagtattcttccacggcaccgttgggtgg 30749529 Query: 404 ctttgcattcattgctgcttgggccagtctgctcttctgattatatcgtgtattcgtgtt 463 |||||| ||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 30749530 ctttgcgttcatcgctgcttgggccagtctgctcttctgattatatc--------gtgtt 30749581 Query: 464 ttagcctgtgaaaacattatctacattactgaaagctttgtatttgctgctttattaggt 523 ||||| ||||||||| ||| |||||||||||| |||||||||||| ||| ||| || | Sbjct: 30749582 ttagcatgtgaaaac-gtat-tacattactgaatgctttgtatttggtgccctatcagtt 30749639 Query: 524 catgcaattg 533 |||||||||| Sbjct: 30749640 catgcaattg 30749649 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 217 aggtttggcacaccgcgtccctctaccatctcgtccacaccgcggcgttgctcggggctc 276 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30749115 aggtttggcacactgcgtccctctaccatctcgtccacaccgcggcgttgctcggggctc 30749174 Query: 277 ccatcgtcaagcgcccc 293 ||||| |||||||||| Sbjct: 30749175 ccatcaccaagcgcccc 30749191 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 147 ggggttgctgctcttggacttggcacctatggagcgcacatgttccgccccaagaaccct 206 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 30748929 ggggttgctgcccttggacttggcacctatggcgcgcacatgttccgccccaagaacccc 30748988 Query: 207 gcttacaaggaggt 220 || ||||||||||| Sbjct: 30748989 gcgtacaaggaggt 30749002