BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst025m09 (947 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT828035.1| Oryza sativa (indica cultivar-group) cDNA clone:... 480 e-132 emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 480 e-132 ref|NM_001060516.1| Oryza sativa (japonica cultivar-group) Os04g... 456 e-125 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 456 e-125 emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4,... 456 e-125 >emb|CT828035.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119P12, full insert sequence Length = 1211 Score = 480 bits (242), Expect = e-132 Identities = 347/382 (90%) Strand = Plus / Plus Query: 384 cggcctccgtgccgccgttcccgtcgccgcagccaatggcggtgtacagctccatctgga 443 |||| |||| |||||||||||||||||||||||| ||| |||| |||||||||||||||| Sbjct: 620 cggcgtccgcgccgccgttcccgtcgccgcagccgatgtcggtctacagctccatctgga 679 Query: 444 gcgcggacgactgggcgacgcagggcgggcgcgtcaagacggactggtcgcacgcgccgt 503 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 680 acgcggacgactgggcgacgcagggcgggcgcgtgaagacggactggtcgcacgcgccgt 739 Query: 504 tcgtggccacgtaccgggatgtgcgggtggacgggtgcgcatgggcggccaatgccagcg 563 |||||||||||| ||| || || || || || |||||||| |||||||| || |||| || Sbjct: 740 tcgtggccacgttccgcgacgtccgcgtcgaggggtgcgcgtgggcggcgaacgccaccg 799 Query: 564 actgggatgccggggaggtgaggcggtgcagcgaggtctcctggggcaaggaaggcaggt 623 ||| ||| ||||| |||||| |||||||| | | ||| ||||||||||| || |||| Sbjct: 800 actcggacgccggcgaggtggcgcggtgcacggggagctcgtggggcaaggaggggaggt 859 Query: 624 actggtggaaggagaaggacatggaggagctcaccgtgcaccagagccaccagctcttct 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 860 actggtggaaggagaaggacatggaggagctcaccgtgcaccagagccaccagctcgtct 919 Query: 684 gggcccgtgcgcaccacctggtctacgactactgcgtcgacaccgaccgcttccccgtcc 743 |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 920 gggcgcgcgcgcaccacctcgtctacgactactgcgtcgacaccgaccgcttccccgtcc 979 Query: 744 agccgccggagtgcgccggccg 765 |||||||||||||||||||||| Sbjct: 980 agccgccggagtgcgccggccg 1001 Score = 394 bits (199), Expect = e-106 Identities = 235/247 (95%) Strand = Plus / Plus Query: 87 tgtcgtccgagggggacaaacacaacgagttcgacttcgagtttctgggcaacgtcaccg 146 ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 314 tgtcgtccggcggggacaagcacaacgagttcgacttcgagttcctgggcaacgtcaccg 373 Query: 147 gcgagccgtacctggtgcagaccaacctctacatcgacggcgtcggcaaccgggagcagc 206 |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 374 gcgagccgtacctggttcagaccaacctgtacatcgacggcgtcggcaaccgggagcagc 433 Query: 207 gcatcgacctgtggttcgaccccaccgccgacttccacacctacgccatcctctggaacc 266 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 434 gcatcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaacc 493 Query: 267 ccagccaggtcgtcttcctcgtcgacgacacgccgatccgcgtccacgagaacaagaatg 326 ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| | Sbjct: 494 ccagccaggtcgtcttcctcgtcgacgacacccccatccgcgtctacgagaacaagaacg 553 Query: 327 ccaccgc 333 ||||||| Sbjct: 554 ccaccgc 560 >emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 480 bits (242), Expect = e-132 Identities = 347/382 (90%) Strand = Plus / Plus Query: 384 cggcctccgtgccgccgttcccgtcgccgcagccaatggcggtgtacagctccatctgga 443 |||| |||| |||||||||||||||||||||||| ||| |||| |||||||||||||||| Sbjct: 31883 cggcgtccgcgccgccgttcccgtcgccgcagccgatgtcggtctacagctccatctgga 31942 Query: 444 gcgcggacgactgggcgacgcagggcgggcgcgtcaagacggactggtcgcacgcgccgt 503 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 31943 acgcggacgactgggcgacgcagggcgggcgcgtgaagacggactggtcgcacgcgccgt 32002 Query: 504 tcgtggccacgtaccgggatgtgcgggtggacgggtgcgcatgggcggccaatgccagcg 563 |||||||||||| ||| || || || || || |||||||| |||||||| || |||| || Sbjct: 32003 tcgtggccacgttccgcgacgtccgcgtcgaggggtgcgcgtgggcggcgaacgccaccg 32062 Query: 564 actgggatgccggggaggtgaggcggtgcagcgaggtctcctggggcaaggaaggcaggt 623 ||| ||| ||||| |||||| |||||||| | | ||| ||||||||||| || |||| Sbjct: 32063 actcggacgccggcgaggtggcgcggtgcacggggagctcgtggggcaaggaggggaggt 32122 Query: 624 actggtggaaggagaaggacatggaggagctcaccgtgcaccagagccaccagctcttct 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 32123 actggtggaaggagaaggacatggaggagctcaccgtgcaccagagccaccagctcgtct 32182 Query: 684 gggcccgtgcgcaccacctggtctacgactactgcgtcgacaccgaccgcttccccgtcc 743 |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 32183 gggcgcgcgcgcaccacctcgtctacgactactgcgtcgacaccgaccgcttccccgtcc 32242 Query: 744 agccgccggagtgcgccggccg 765 |||||||||||||||||||||| Sbjct: 32243 agccgccggagtgcgccggccg 32264 Score = 398 bits (201), Expect = e-107 Identities = 240/253 (94%) Strand = Plus / Plus Query: 81 tgcagttgtcgtccgagggggacaaacacaacgagttcgacttcgagtttctgggcaacg 140 ||||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 31571 tgcagctgtcgtccggcggggacaagcacaacgagttcgacttcgagttcctgggcaacg 31630 Query: 141 tcaccggcgagccgtacctggtgcagaccaacctctacatcgacggcgtcggcaaccggg 200 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 31631 tcaccggcgagccgtacctggttcagaccaacctgtacatcgacggcgtcggcaaccggg 31690 Query: 201 agcagcgcatcgacctgtggttcgaccccaccgccgacttccacacctacgccatcctct 260 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 31691 agcagcgcatcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctct 31750 Query: 261 ggaaccccagccaggtcgtcttcctcgtcgacgacacgccgatccgcgtccacgagaaca 320 ||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| Sbjct: 31751 ggaaccccagccaggtcgtcttcctcgtcgacgacacccccatccgcgtctacgagaaca 31810 Query: 321 agaatgccaccgc 333 |||| |||||||| Sbjct: 31811 agaacgccaccgc 31823 >ref|NM_001060516.1| Oryza sativa (japonica cultivar-group) Os04g0631200 (Os04g0631200) mRNA, partial cds Length = 1279 Score = 456 bits (230), Expect = e-125 Identities = 347/386 (89%) Strand = Plus / Plus Query: 384 cggcctccgtgccgccgttcccgtcgccgcagccaatggcggtgtacagctccatctgga 443 |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 628 cggcgtccgtgccgccgttcccgtcgccgcagccgatgtcggtgtacagctccatctgga 687 Query: 444 gcgcggacgactgggcgacgcagggcgggcgcgtcaagacggactggtcgcacgcgccgt 503 |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 688 acgcggacgactgggcgacgcagggcgggcgggtgaagacggactggtcgcacgcgccgt 747 Query: 504 tcgtggccacgtaccgggatgtgcgggtggacgggtgcgcatgggcggccaatgccagcg 563 |||||||||||| ||| || || || || || || ||||| |||||||| || |||| | Sbjct: 748 tcgtggccacgttccgcgacgtccgcgtcgagggttgcgcgtgggcggcgaacgccacgg 807 Query: 564 actgggatgccggggaggtgaggcggtgcagcgaggtctcctggggcaaggaaggcaggt 623 ||| ||| ||||| |||||| |||||||| | | ||| ||||||||||| || |||| Sbjct: 808 actcggacgccggcgaggtggcgcggtgcacggggagctcgtggggcaaggaggggaggt 867 Query: 624 actggtggaaggagaaggacatggaggagctcaccgtgcaccagagccaccagctcttct 683 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | Sbjct: 868 actggtggaaggagaaggacatggaggagctcaccgtgcaccagaaccaccagctcgtgt 927 Query: 684 gggcccgtgcgcaccacctggtctacgactactgcgtcgacaccgaccgcttccccgtcc 743 |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 928 gggcgcgcgcgcaccacctcgtctacgactactgcgtcgacaccgaccgcttccccgtcc 987 Query: 744 agccgccggagtgcgccggccggtga 769 ||||||||||||||||||| |||||| Sbjct: 988 agccgccggagtgcgccggacggtga 1013 Score = 414 bits (209), Expect = e-112 Identities = 259/275 (94%), Gaps = 3/275 (1%) Strand = Plus / Plus Query: 87 tgtcgtccgagggggacaaacacaacgagttcgacttcgagtttctgggcaacgtcaccg 146 ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 316 tgtcgtccggcggggacaagcacaacgagttcgacttcgagttcctgggcaacgtcaccg 375 Query: 147 gcgagccgtacctggtgcagaccaacctctacatcgacggcgtcggcaaccgggagcagc 206 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 376 gcgagccgtacctggtgcagaccaacctgtacatcgacggcgtcggcaaccgggagcagc 435 Query: 207 gcatcgacctgtggttcgaccccaccgccgacttccacacctacgccatcctctggaacc 266 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 436 gcatcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaacc 495 Query: 267 ccagccaggtcgtcttcctcgtcgacgacacgccgatccgcgtccacgagaacaagaatg 326 ||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| | Sbjct: 496 ccagccaggtcgtcttcctcgtcgacgacacccccatccgcgtctacgagaacaagaacg 555 Query: 327 ccaccgcggccgtcaccaagggccaccaccaccac 361 ||||||| ||||| |||||||||||||| |||| Sbjct: 556 ccaccgccgccgt---caagggccaccaccgccac 587 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 456 bits (230), Expect = e-125 Identities = 347/386 (89%) Strand = Plus / Plus Query: 384 cggcctccgtgccgccgttcccgtcgccgcagccaatggcggtgtacagctccatctgga 443 |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 32180713 cggcgtccgtgccgccgttcccgtcgccgcagccgatgtcggtgtacagctccatctgga 32180772 Query: 444 gcgcggacgactgggcgacgcagggcgggcgcgtcaagacggactggtcgcacgcgccgt 503 |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 32180773 acgcggacgactgggcgacgcagggcgggcgggtgaagacggactggtcgcacgcgccgt 32180832 Query: 504 tcgtggccacgtaccgggatgtgcgggtggacgggtgcgcatgggcggccaatgccagcg 563 |||||||||||| ||| || || || || || || ||||| |||||||| || |||| | Sbjct: 32180833 tcgtggccacgttccgcgacgtccgcgtcgagggttgcgcgtgggcggcgaacgccacgg 32180892 Query: 564 actgggatgccggggaggtgaggcggtgcagcgaggtctcctggggcaaggaaggcaggt 623 ||| ||| ||||| |||||| |||||||| | | ||| ||||||||||| || |||| Sbjct: 32180893 actcggacgccggcgaggtggcgcggtgcacggggagctcgtggggcaaggaggggaggt 32180952 Query: 624 actggtggaaggagaaggacatggaggagctcaccgtgcaccagagccaccagctcttct 683 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | Sbjct: 32180953 actggtggaaggagaaggacatggaggagctcaccgtgcaccagaaccaccagctcgtgt 32181012 Query: 684 gggcccgtgcgcaccacctggtctacgactactgcgtcgacaccgaccgcttccccgtcc 743 |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 32181013 gggcgcgcgcgcaccacctcgtctacgactactgcgtcgacaccgaccgcttccccgtcc 32181072 Query: 744 agccgccggagtgcgccggccggtga 769 ||||||||||||||||||| |||||| Sbjct: 32181073 agccgccggagtgcgccggacggtga 32181098 Score = 418 bits (211), Expect = e-113 Identities = 264/281 (93%), Gaps = 3/281 (1%) Strand = Plus / Plus Query: 81 tgcagttgtcgtccgagggggacaaacacaacgagttcgacttcgagtttctgggcaacg 140 ||||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 32180395 tgcagctgtcgtccggcggggacaagcacaacgagttcgacttcgagttcctgggcaacg 32180454 Query: 141 tcaccggcgagccgtacctggtgcagaccaacctctacatcgacggcgtcggcaaccggg 200 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 32180455 tcaccggcgagccgtacctggtgcagaccaacctgtacatcgacggcgtcggcaaccggg 32180514 Query: 201 agcagcgcatcgacctgtggttcgaccccaccgccgacttccacacctacgccatcctct 260 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 32180515 agcagcgcatcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctct 32180574 Query: 261 ggaaccccagccaggtcgtcttcctcgtcgacgacacgccgatccgcgtccacgagaaca 320 ||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| Sbjct: 32180575 ggaaccccagccaggtcgtcttcctcgtcgacgacacccccatccgcgtctacgagaaca 32180634 Query: 321 agaatgccaccgcggccgtcaccaagggccaccaccaccac 361 |||| |||||||| ||||| |||||||||||||| |||| Sbjct: 32180635 agaacgccaccgccgccgt---caagggccaccaccgccac 32180672 Score = 103 bits (52), Expect = 1e-18 Identities = 64/68 (94%) Strand = Plus / Minus Query: 440 tggagcgcggacgactgggcgacgcagggcgggcgcgtcaagacggactggtcgcacgcg 499 |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 30516635 tggaacgccgacgactgggccacgcagggcgggcgcgtcaagacggactggtcgcaggcg 30516576 Query: 500 ccgttcgt 507 |||||||| Sbjct: 30516575 ccgttcgt 30516568 Score = 93.7 bits (47), Expect = 1e-15 Identities = 131/159 (82%) Strand = Plus / Plus Query: 111 acgagttcgacttcgagtttctgggcaacgtcaccggcgagccgtacctggtgcagacca 170 ||||| ||||| | ||||| || |||||||||||||||||||| ||| | | || |||| Sbjct: 30553455 acgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccacacca 30553514 Query: 171 acctctacatcgacggcgtcggcaaccgggagcagcgcatcgacctgtggttcgacccca 230 || ||| | | ||||||||||| ||| ||||||| || ||| ||||||||||||| Sbjct: 30553515 acatcttcgccaacggcgtcggcggccgcgagcagcagttccgcctctggttcgacccca 30553574 Query: 231 ccgccgacttccacacctacgccatcctctggaacccca 269 ||||||||| |||||||||| ||||| |||||||||||| Sbjct: 30553575 ccgccgactaccacacctactccatcgtctggaacccca 30553613 Score = 93.7 bits (47), Expect = 1e-15 Identities = 68/75 (90%) Strand = Plus / Minus Query: 194 aaccgggagcagcgcatcgacctgtggttcgaccccaccgccgacttccacacctacgcc 253 ||||||||||||| || |||| |||||||||||||||||||||||||||| |||| || Sbjct: 30556918 aaccgggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacacc 30556859 Query: 254 atcctctggaacccc 268 ||||||||||||||| Sbjct: 30556858 atcctctggaacccc 30556844 >emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 456 bits (230), Expect = e-125 Identities = 347/386 (89%) Strand = Plus / Plus Query: 384 cggcctccgtgccgccgttcccgtcgccgcagccaatggcggtgtacagctccatctgga 443 |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 76402 cggcgtccgtgccgccgttcccgtcgccgcagccgatgtcggtgtacagctccatctgga 76461 Query: 444 gcgcggacgactgggcgacgcagggcgggcgcgtcaagacggactggtcgcacgcgccgt 503 |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 76462 acgcggacgactgggcgacgcagggcgggcgggtgaagacggactggtcgcacgcgccgt 76521 Query: 504 tcgtggccacgtaccgggatgtgcgggtggacgggtgcgcatgggcggccaatgccagcg 563 |||||||||||| ||| || || || || || || ||||| |||||||| || |||| | Sbjct: 76522 tcgtggccacgttccgcgacgtccgcgtcgagggttgcgcgtgggcggcgaacgccacgg 76581 Query: 564 actgggatgccggggaggtgaggcggtgcagcgaggtctcctggggcaaggaaggcaggt 623 ||| ||| ||||| |||||| |||||||| | | ||| ||||||||||| || |||| Sbjct: 76582 actcggacgccggcgaggtggcgcggtgcacggggagctcgtggggcaaggaggggaggt 76641 Query: 624 actggtggaaggagaaggacatggaggagctcaccgtgcaccagagccaccagctcttct 683 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | Sbjct: 76642 actggtggaaggagaaggacatggaggagctcaccgtgcaccagaaccaccagctcgtgt 76701 Query: 684 gggcccgtgcgcaccacctggtctacgactactgcgtcgacaccgaccgcttccccgtcc 743 |||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 76702 gggcgcgcgcgcaccacctcgtctacgactactgcgtcgacaccgaccgcttccccgtcc 76761 Query: 744 agccgccggagtgcgccggccggtga 769 ||||||||||||||||||| |||||| Sbjct: 76762 agccgccggagtgcgccggacggtga 76787 Score = 418 bits (211), Expect = e-113 Identities = 264/281 (93%), Gaps = 3/281 (1%) Strand = Plus / Plus Query: 81 tgcagttgtcgtccgagggggacaaacacaacgagttcgacttcgagtttctgggcaacg 140 ||||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 76084 tgcagctgtcgtccggcggggacaagcacaacgagttcgacttcgagttcctgggcaacg 76143 Query: 141 tcaccggcgagccgtacctggtgcagaccaacctctacatcgacggcgtcggcaaccggg 200 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 76144 tcaccggcgagccgtacctggtgcagaccaacctgtacatcgacggcgtcggcaaccggg 76203 Query: 201 agcagcgcatcgacctgtggttcgaccccaccgccgacttccacacctacgccatcctct 260 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 76204 agcagcgcatcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctct 76263 Query: 261 ggaaccccagccaggtcgtcttcctcgtcgacgacacgccgatccgcgtccacgagaaca 320 ||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| Sbjct: 76264 ggaaccccagccaggtcgtcttcctcgtcgacgacacccccatccgcgtctacgagaaca 76323 Query: 321 agaatgccaccgcggccgtcaccaagggccaccaccaccac 361 |||| |||||||| ||||| |||||||||||||| |||| Sbjct: 76324 agaacgccaccgccgccgt---caagggccaccaccgccac 76361