BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst025g10 (610 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055375.1| Oryza sativa (japonica cultivar-group) Os03g... 139 1e-29 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29 gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29 dbj|AK063116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29 dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29 >ref|NM_001055375.1| Oryza sativa (japonica cultivar-group) Os03g0128400 (Os03g0128400) mRNA, complete cds Length = 583 Score = 139 bits (70), Expect = 1e-29 Identities = 164/194 (84%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 326 aaaacaaagcagctcaagcgatgacaacttgagttcttcagatggcccacctgtcctaac 385 |||||| | ||||||||| ||||| |||| || || ||||||||||||| |||||||| Sbjct: 248 aaaacagaacagctcaagtgatgataactcaagctcaacagatggcccacccgtcctaac 307 Query: 386 tattgtagctggtgtcgtcgtgttccttctagtcttctggataattggatcgatcatcac 445 |||| | |||||| || | ||||||||||||||||| ||| | || |||||| || |||| Sbjct: 308 tattttggctggtatcattgtgttccttctagtcttgtgggttatcggatcgctcttcac 367 Query: 446 ctggattgttggtttggtccttggtgctgcgaaatcttagaagttc-aattttagggtag 504 |||||||| |||||||||| |||| ||||| ||||||||||||||| ||||||||| || Sbjct: 368 ctggattgctggtttggtctttggcgctgcaaaatcttagaagttcaaattttaggataa 427 Query: 505 ctcttcaccttttt 518 ||| ||||||||| Sbjct: 428 ttctgcaccttttt 441 Score = 85.7 bits (43), Expect = 2e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 141 cctcgccggcctccgcccgccgcctccgccgtcccaccccgaggcgcccgcatcgtcctc 200 |||||||||| |||||| || | |||||||||||| ||||||| ||||||| |||||||| Sbjct: 81 cctcgccggcttccgcctgctgtctccgccgtccctccccgagccgcccgcgtcgtcctc 140 Query: 201 cgtaagttcaggcttcctgacccttcggcaagaaatttgctgtggtctgagaatgcaata 260 ||| |||||||||||||| || | |||||||| || || || | ||| || ||||| Sbjct: 141 cgtggattcaggcttcctgatccagctgcaagaaaatttctctgtttcgaggattcaata 200 Query: 261 agcttgcggacgaagcaccagaa 283 |||||| |||| |||||||||| Sbjct: 201 ggcttgcagacggagcaccagaa 223 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 139 bits (70), Expect = 1e-29 Identities = 164/194 (84%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 326 aaaacaaagcagctcaagcgatgacaacttgagttcttcagatggcccacctgtcctaac 385 |||||| | ||||||||| ||||| |||| || || ||||||||||||| |||||||| Sbjct: 1589927 aaaacagaacagctcaagtgatgataactcaagctcaacagatggcccacccgtcctaac 1589868 Query: 386 tattgtagctggtgtcgtcgtgttccttctagtcttctggataattggatcgatcatcac 445 |||| | |||||| || | ||||||||||||||||| ||| | || |||||| || |||| Sbjct: 1589867 tattttggctggtatcattgtgttccttctagtcttgtgggttatcggatcgctcttcac 1589808 Query: 446 ctggattgttggtttggtccttggtgctgcgaaatcttagaagttc-aattttagggtag 504 |||||||| |||||||||| |||| ||||| ||||||||||||||| ||||||||| || Sbjct: 1589807 ctggattgctggtttggtctttggcgctgcaaaatcttagaagttcaaattttaggataa 1589748 Query: 505 ctcttcaccttttt 518 ||| ||||||||| Sbjct: 1589747 ttctgcaccttttt 1589734 >gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 139 bits (70), Expect = 1e-29 Identities = 164/194 (84%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 326 aaaacaaagcagctcaagcgatgacaacttgagttcttcagatggcccacctgtcctaac 385 |||||| | ||||||||| ||||| |||| || || ||||||||||||| |||||||| Sbjct: 69490 aaaacagaacagctcaagtgatgataactcaagctcaacagatggcccacccgtcctaac 69431 Query: 386 tattgtagctggtgtcgtcgtgttccttctagtcttctggataattggatcgatcatcac 445 |||| | |||||| || | ||||||||||||||||| ||| | || |||||| || |||| Sbjct: 69430 tattttggctggtatcattgtgttccttctagtcttgtgggttatcggatcgctcttcac 69371 Query: 446 ctggattgttggtttggtccttggtgctgcgaaatcttagaagttc-aattttagggtag 504 |||||||| |||||||||| |||| ||||| ||||||||||||||| ||||||||| || Sbjct: 69370 ctggattgctggtttggtctttggcgctgcaaaatcttagaagttcaaattttaggataa 69311 Query: 505 ctcttcaccttttt 518 ||| ||||||||| Sbjct: 69310 ttctgcaccttttt 69297 >dbj|AK063116.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E01, full insert sequence Length = 583 Score = 139 bits (70), Expect = 1e-29 Identities = 164/194 (84%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 326 aaaacaaagcagctcaagcgatgacaacttgagttcttcagatggcccacctgtcctaac 385 |||||| | ||||||||| ||||| |||| || || ||||||||||||| |||||||| Sbjct: 248 aaaacagaacagctcaagtgatgataactcaagctcaacagatggcccacccgtcctaac 307 Query: 386 tattgtagctggtgtcgtcgtgttccttctagtcttctggataattggatcgatcatcac 445 |||| | |||||| || | ||||||||||||||||| ||| | || |||||| || |||| Sbjct: 308 tattttggctggtatcattgtgttccttctagtcttgtgggttatcggatcgctcttcac 367 Query: 446 ctggattgttggtttggtccttggtgctgcgaaatcttagaagttc-aattttagggtag 504 |||||||| |||||||||| |||| ||||| ||||||||||||||| ||||||||| || Sbjct: 368 ctggattgctggtttggtctttggcgctgcaaaatcttagaagttcaaattttaggataa 427 Query: 505 ctcttcaccttttt 518 ||| ||||||||| Sbjct: 428 ttctgcaccttttt 441 Score = 85.7 bits (43), Expect = 2e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 141 cctcgccggcctccgcccgccgcctccgccgtcccaccccgaggcgcccgcatcgtcctc 200 |||||||||| |||||| || | |||||||||||| ||||||| ||||||| |||||||| Sbjct: 81 cctcgccggcttccgcctgctgtctccgccgtccctccccgagccgcccgcgtcgtcctc 140 Query: 201 cgtaagttcaggcttcctgacccttcggcaagaaatttgctgtggtctgagaatgcaata 260 ||| |||||||||||||| || | |||||||| || || || | ||| || ||||| Sbjct: 141 cgtggattcaggcttcctgatccagctgcaagaaaatttctctgtttcgaggattcaata 200 Query: 261 agcttgcggacgaagcaccagaa 283 |||||| |||| |||||||||| Sbjct: 201 ggcttgcagacggagcaccagaa 223 >dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 139 bits (70), Expect = 1e-29 Identities = 164/194 (84%), Gaps = 1/194 (0%) Strand = Plus / Minus Query: 326 aaaacaaagcagctcaagcgatgacaacttgagttcttcagatggcccacctgtcctaac 385 |||||| | ||||||||| ||||| |||| || || ||||||||||||| |||||||| Sbjct: 2392 aaaacagaacagctcaagtgatgataactcaagctcaacagatggcccacccgtcctaac 2333 Query: 386 tattgtagctggtgtcgtcgtgttccttctagtcttctggataattggatcgatcatcac 445 |||| | |||||| || | ||||||||||||||||| ||| | || |||||| || |||| Sbjct: 2332 tattttggctggtatcattgtgttccttctagtcttgtgggttatcggatcgctcttcac 2273 Query: 446 ctggattgttggtttggtccttggtgctgcgaaatcttagaagttc-aattttagggtag 504 |||||||| |||||||||| |||| ||||| ||||||||||||||| ||||||||| || Sbjct: 2272 ctggattgctggtttggtctttggcgctgcaaaatcttagaagttcaaattttaggataa 2213 Query: 505 ctcttcaccttttt 518 ||| ||||||||| Sbjct: 2212 ttctgcaccttttt 2199