BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst025d21 (900 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:... 565 e-157 ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g... 561 e-156 gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein... 561 e-156 dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 561 e-156 gb|AF093632.1|AF093632 Oryza sativa high mobility group protein ... 559 e-156 >emb|CT834561.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120M18, full insert sequence Length = 994 Score = 565 bits (285), Expect = e-157 Identities = 398/435 (91%), Gaps = 3/435 (0%) Strand = Plus / Plus Query: 152 cgcaggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagt 211 ||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||| Sbjct: 211 cgcaggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagt 270 Query: 212 tggcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccg 271 |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 271 tggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccg 330 Query: 272 ggaaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagt 331 | |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||| Sbjct: 331 gcaaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagt 390 Query: 332 tccgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaag 391 |||| ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||| Sbjct: 391 tccgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaag 450 Query: 392 cagccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaagg 451 ||||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||| Sbjct: 451 cagccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaagg 510 Query: 452 ccaataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagca 511 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 ccaacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagca 570 Query: 512 ctgccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgaca 571 ||||||||||| || || |||||||||||||||||||| ||||| || |||||||||| Sbjct: 571 ctgccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgaca 627 Query: 572 aatccaagtccgagg 586 | ||||||||||||| Sbjct: 628 agtccaagtccgagg 642 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 697 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 753 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 782 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 841 Query: 754 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 809 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 842 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 901 Query: 810 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 868 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 902 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 961 Query: 869 ttgcgataatatcagtttgggtatgttagatt 900 ||| ||||||||||||||| |||||||||||| Sbjct: 962 ttgtgataatatcagtttgcgtatgttagatt 993 >ref|NM_001065175.1| Oryza sativa (japonica cultivar-group) Os06g0728000 (Os06g0728000) mRNA, complete cds Length = 913 Score = 561 bits (283), Expect = e-156 Identities = 396/433 (91%), Gaps = 3/433 (0%) Strand = Plus / Plus Query: 154 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 213 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 136 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 195 Query: 214 gcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 273 || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 255 Query: 274 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 333 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 256 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 315 Query: 334 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 393 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 316 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 375 Query: 394 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 453 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 376 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 435 Query: 454 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 513 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 495 Query: 514 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 573 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 496 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 552 Query: 574 tccaagtccgagg 586 ||||||||||||| Sbjct: 553 tccaagtccgagg 565 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 697 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 753 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 754 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 809 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 810 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 868 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 869 ttgcgataatatcagtttgggtatgttagatt 900 ||| ||||||||||||||| |||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagatt 913 >gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA, complete cds Length = 918 Score = 561 bits (283), Expect = e-156 Identities = 396/433 (91%), Gaps = 3/433 (0%) Strand = Plus / Plus Query: 154 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 213 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 112 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 171 Query: 214 gcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 273 || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 231 Query: 274 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 333 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 232 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 291 Query: 334 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 393 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 292 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 351 Query: 394 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 453 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 352 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 411 Query: 454 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 513 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 471 Query: 514 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 573 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 472 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 528 Query: 574 tccaagtccgagg 586 ||||||||||||| Sbjct: 529 tccaagtccgagg 541 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 697 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 753 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 678 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 737 Query: 754 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 809 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 738 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 797 Query: 810 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 868 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 798 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 857 Query: 869 ttgcgataatatcagtttgggtatgttagatt 900 ||| ||||||||||||||| |||||||||||| Sbjct: 858 ttgtgataatatcagtttgcgtatgttagatt 889 >dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full insert sequence Length = 913 Score = 561 bits (283), Expect = e-156 Identities = 396/433 (91%), Gaps = 3/433 (0%) Strand = Plus / Plus Query: 154 caggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttg 213 ||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| Sbjct: 136 caggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttg 195 Query: 214 gcggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggg 273 || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggc 255 Query: 274 aaggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttc 333 |||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||| Sbjct: 256 aaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttc 315 Query: 334 cgcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagca 393 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 316 cgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagca 375 Query: 394 gccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcc 453 ||||| || |||||||||||| ||| ||| ||||||||||||||||| |||||||||||| Sbjct: 376 gccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcc 435 Query: 454 aataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcact 513 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcact 495 Query: 514 gccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaa 573 ||||||||| || || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 496 gccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaag 552 Query: 574 tccaagtccgagg 586 ||||||||||||| Sbjct: 553 tccaagtccgagg 565 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 697 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 753 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 702 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 761 Query: 754 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 809 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 762 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 821 Query: 810 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 868 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 822 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 881 Query: 869 ttgcgataatatcagtttgggtatgttagatt 900 ||| ||||||||||||||| |||||||||||| Sbjct: 882 ttgtgataatatcagtttgcgtatgttagatt 913 >gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds Length = 869 Score = 559 bits (282), Expect = e-156 Identities = 395/432 (91%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 155 aggaatcagccatgaagggggccaaacccaggggcgccgccaaggccgacgccaagttgg 214 |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 64 aggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagttgg 123 Query: 215 cggtgaagagcaagggagcggagaagcccgccgccaagggcaggaaggggaaggccggga 274 | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 124 ctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggca 183 Query: 275 aggaccccaacaagcccaagagggctcccagcgccttcttcgtcttcatggaggagttcc 334 ||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||||| Sbjct: 184 aggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttcc 243 Query: 335 gcaaggagttcaaggagaagaacccaaagaataagtctgttgctgctgtggggaaagcag 394 | ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 244 gtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcag 303 Query: 395 ccggcgacaggtggaaatccttgagcgacgcggacaaggctccctacgtagccaaggcca 454 |||| || |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 304 ccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggcca 363 Query: 455 ataagctcaagggagagtacaacaaggccattgctgcctacaacaagggcgagagcactg 514 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 acaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactg 423 Query: 515 ccaagaaggctgctcctgccaaggaggaagaggaggaagacgaagaagaatctgacaaat 574 |||||||| || || |||||||||||||||||||| ||||| || ||||||||||| | Sbjct: 424 ccaagaag---gcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagt 480 Query: 575 ccaagtccgagg 586 |||||||||||| Sbjct: 481 ccaagtccgagg 492 Score = 222 bits (112), Expect = 2e-54 Identities = 190/212 (89%), Gaps = 8/212 (3%) Strand = Plus / Plus Query: 697 tctaccagaattattcagtttcacttcacatcgtgatgttttactttta---tcgtccta 753 ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 629 tctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtccta 688 Query: 754 taacggatagcgctccttgttggcgccaccggtgggtgttgcggtgcagc--atgtgt-- 809 ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| | Sbjct: 689 taacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttg 748 Query: 810 tctctgctgtcaatg-cctgcttgtacctagattactcgttccattgtcatcgactaaca 868 |||| | ||||||| | ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 749 tctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaaca 808 Query: 869 ttgcgataatatcagtttgggtatgttagatt 900 ||| ||||||||||||||| |||||||||||| Sbjct: 809 ttgtgataatatcagtttgcgtatgttagatt 840