BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst024p17 (675 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073310.1| Oryza sativa (japonica cultivar-group) Os12g... 343 6e-91 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 343 6e-91 dbj|AK121352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 6e-91 emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa... 343 6e-91 gb|AY107512.1| Zea mays PCO144235 mRNA sequence 287 3e-74 >ref|NM_001073310.1| Oryza sativa (japonica cultivar-group) Os12g0484700 (Os12g0484700) mRNA, complete cds Length = 832 Score = 343 bits (173), Expect = 6e-91 Identities = 377/444 (84%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 234 gggaggaatggccgtgcttttctgttttctcatgccatgaatgtagttgtgggggcgaag 293 ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 240 gggaggaatggccgtgcctttctgttctctcatgccatgaatgttgttgtgggcgcgaag 299 Query: 294 gaggataggcaacttatgacaggcctacacacagttgctgatatctactgcaatgattgc 353 ||||| |||||||||||||| || || ||||| |||||||||||||| |||||||||||| Sbjct: 300 gaggacaggcaacttatgacggggcttcacactgttgctgatatctattgcaatgattgc 359 Query: 354 cgcgaggtgttaggctggaagtatgagagagcatacgaggagacacagaagtacaaggaa 413 || |||||||| ||||||||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 360 cgggaggtgttgggctggaagtacgagagagcctatgaggaaacacagaagtacaaggaa 419 Query: 414 gggaagttcatatttgagaagtcaaagattgtcaaagagaactggtagtatcc--aagat 471 |||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||| Sbjct: 420 gggaagttcatatttgagaagtcaaaaatcgtcaaagagaactggtagaatccaaaagat 479 Query: 472 tagacacaccaaacattccgctgaagatcaaatattcattgttacatagtcatcaatgcg 531 ||| ||| |||||| ||| || ||| ||| ||||| |||| || || |||| || | Sbjct: 480 taggcactccaaactttctttagaggatgaaacattcactgttccaaggttatcagtgtg 539 Query: 532 ttttggatctttatgcctttgtaaatagcagtcatccacgggttccaatcttgaggctgc 591 || ||| |||||||| ||||||||||| ||||||||||| ||| |||||| || |||| Sbjct: 540 ttctggttctttatgtctttgtaaatatcagtcatccacaagttttaatcttaagtctgc 599 Query: 592 atgttcttgcgttactgtcatctgtaaagtgcacttattcctgttcgtttctgtgaataa 651 ||||||||| || | || | |||||| || ||| ||| ||| ||||||||||||| Sbjct: 600 ctgttcttgccttgccgtgaagtgtaaattgttcttgctcccgtttctttctgtgaataa 659 Query: 652 gatacagcctgtggttatttgttc 675 ||| |||||||| ||||||||| Sbjct: 660 catatggcctgtgggtatttgttc 683 Score = 157 bits (79), Expect = 7e-35 Identities = 91/95 (95%) Strand = Plus / Plus Query: 111 catggcggagctggtggggccgcgcgtgtacagctgctgcaactgccggaaccacgtctg 170 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 146 catggcggagctggtgggtccgcgggtgtacagctgctgcaactgccggaaccacgtctg 205 Query: 171 cctgcacgacgacatcatctccaaggcctttcagg 205 ||| ||||||||||||||||||||||| ||||||| Sbjct: 206 cctccacgacgacatcatctccaaggcttttcagg 240 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 343 bits (173), Expect = 6e-91 Identities = 377/444 (84%), Gaps = 2/444 (0%) Strand = Plus / Minus Query: 234 gggaggaatggccgtgcttttctgttttctcatgccatgaatgtagttgtgggggcgaag 293 ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 17948687 gggaggaatggccgtgcctttctgttctctcatgccatgaatgttgttgtgggcgcgaag 17948628 Query: 294 gaggataggcaacttatgacaggcctacacacagttgctgatatctactgcaatgattgc 353 ||||| |||||||||||||| || || ||||| |||||||||||||| |||||||||||| Sbjct: 17948627 gaggacaggcaacttatgacggggcttcacactgttgctgatatctattgcaatgattgc 17948568 Query: 354 cgcgaggtgttaggctggaagtatgagagagcatacgaggagacacagaagtacaaggaa 413 || |||||||| ||||||||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 17948567 cgggaggtgttgggctggaagtacgagagagcctatgaggaaacacagaagtacaaggaa 17948508 Query: 414 gggaagttcatatttgagaagtcaaagattgtcaaagagaactggtagtatcc--aagat 471 |||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||| Sbjct: 17948507 gggaagttcatatttgagaagtcaaaaatcgtcaaagagaactggtagaatccaaaagat 17948448 Query: 472 tagacacaccaaacattccgctgaagatcaaatattcattgttacatagtcatcaatgcg 531 ||| ||| |||||| ||| || ||| ||| ||||| |||| || || |||| || | Sbjct: 17948447 taggcactccaaactttctttagaggatgaaacattcactgttccaaggttatcagtgtg 17948388 Query: 532 ttttggatctttatgcctttgtaaatagcagtcatccacgggttccaatcttgaggctgc 591 || ||| |||||||| ||||||||||| ||||||||||| ||| |||||| || |||| Sbjct: 17948387 ttctggttctttatgtctttgtaaatatcagtcatccacaagttttaatcttaagtctgc 17948328 Query: 592 atgttcttgcgttactgtcatctgtaaagtgcacttattcctgttcgtttctgtgaataa 651 ||||||||| || | || | |||||| || ||| ||| ||| ||||||||||||| Sbjct: 17948327 ctgttcttgccttgccgtgaagtgtaaattgttcttgctcccgtttctttctgtgaataa 17948268 Query: 652 gatacagcctgtggttatttgttc 675 ||| |||||||| ||||||||| Sbjct: 17948267 catatggcctgtgggtatttgttc 17948244 Score = 163 bits (82), Expect = 1e-36 Identities = 94/98 (95%) Strand = Plus / Minus Query: 111 catggcggagctggtggggccgcgcgtgtacagctgctgcaactgccggaaccacgtctg 170 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17949535 catggcggagctggtgggtccgcgggtgtacagctgctgcaactgccggaaccacgtctg 17949476 Query: 171 cctgcacgacgacatcatctccaaggcctttcaggtcg 208 ||| ||||||||||||||||||||||| |||||||||| Sbjct: 17949475 cctccacgacgacatcatctccaaggcttttcaggtcg 17949438 >dbj|AK121352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O17, full insert sequence Length = 836 Score = 343 bits (173), Expect = 6e-91 Identities = 377/444 (84%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 234 gggaggaatggccgtgcttttctgttttctcatgccatgaatgtagttgtgggggcgaag 293 ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 244 gggaggaatggccgtgcctttctgttctctcatgccatgaatgttgttgtgggcgcgaag 303 Query: 294 gaggataggcaacttatgacaggcctacacacagttgctgatatctactgcaatgattgc 353 ||||| |||||||||||||| || || ||||| |||||||||||||| |||||||||||| Sbjct: 304 gaggacaggcaacttatgacggggcttcacactgttgctgatatctattgcaatgattgc 363 Query: 354 cgcgaggtgttaggctggaagtatgagagagcatacgaggagacacagaagtacaaggaa 413 || |||||||| ||||||||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 364 cgggaggtgttgggctggaagtacgagagagcctatgaggaaacacagaagtacaaggaa 423 Query: 414 gggaagttcatatttgagaagtcaaagattgtcaaagagaactggtagtatcc--aagat 471 |||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||| Sbjct: 424 gggaagttcatatttgagaagtcaaaaatcgtcaaagagaactggtagaatccaaaagat 483 Query: 472 tagacacaccaaacattccgctgaagatcaaatattcattgttacatagtcatcaatgcg 531 ||| ||| |||||| ||| || ||| ||| ||||| |||| || || |||| || | Sbjct: 484 taggcactccaaactttctttagaggatgaaacattcactgttccaaggttatcagtgtg 543 Query: 532 ttttggatctttatgcctttgtaaatagcagtcatccacgggttccaatcttgaggctgc 591 || ||| |||||||| ||||||||||| ||||||||||| ||| |||||| || |||| Sbjct: 544 ttctggttctttatgtctttgtaaatatcagtcatccacaagttttaatcttaagtctgc 603 Query: 592 atgttcttgcgttactgtcatctgtaaagtgcacttattcctgttcgtttctgtgaataa 651 ||||||||| || | || | |||||| || ||| ||| ||| ||||||||||||| Sbjct: 604 ctgttcttgccttgccgtgaagtgtaaattgttcttgctcccgtttctttctgtgaataa 663 Query: 652 gatacagcctgtggttatttgttc 675 ||| |||||||| ||||||||| Sbjct: 664 catatggcctgtgggtatttgttc 687 Score = 157 bits (79), Expect = 7e-35 Identities = 91/95 (95%) Strand = Plus / Plus Query: 111 catggcggagctggtggggccgcgcgtgtacagctgctgcaactgccggaaccacgtctg 170 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150 catggcggagctggtgggtccgcgggtgtacagctgctgcaactgccggaaccacgtctg 209 Query: 171 cctgcacgacgacatcatctccaaggcctttcagg 205 ||| ||||||||||||||||||||||| ||||||| Sbjct: 210 cctccacgacgacatcatctccaaggcttttcagg 244 >emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 343 bits (173), Expect = 6e-91 Identities = 377/444 (84%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 234 gggaggaatggccgtgcttttctgttttctcatgccatgaatgtagttgtgggggcgaag 293 ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 49869 gggaggaatggccgtgcctttctgttctctcatgccatgaatgttgttgtgggcgcgaag 49928 Query: 294 gaggataggcaacttatgacaggcctacacacagttgctgatatctactgcaatgattgc 353 ||||| |||||||||||||| || || ||||| |||||||||||||| |||||||||||| Sbjct: 49929 gaggacaggcaacttatgacggggcttcacactgttgctgatatctattgcaatgattgc 49988 Query: 354 cgcgaggtgttaggctggaagtatgagagagcatacgaggagacacagaagtacaaggaa 413 || |||||||| ||||||||||| |||||||| || ||||| |||||||||||||||||| Sbjct: 49989 cgggaggtgttgggctggaagtacgagagagcctatgaggaaacacagaagtacaaggaa 50048 Query: 414 gggaagttcatatttgagaagtcaaagattgtcaaagagaactggtagtatcc--aagat 471 |||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||| Sbjct: 50049 gggaagttcatatttgagaagtcaaaaatcgtcaaagagaactggtagaatccaaaagat 50108 Query: 472 tagacacaccaaacattccgctgaagatcaaatattcattgttacatagtcatcaatgcg 531 ||| ||| |||||| ||| || ||| ||| ||||| |||| || || |||| || | Sbjct: 50109 taggcactccaaactttctttagaggatgaaacattcactgttccaaggttatcagtgtg 50168 Query: 532 ttttggatctttatgcctttgtaaatagcagtcatccacgggttccaatcttgaggctgc 591 || ||| |||||||| ||||||||||| ||||||||||| ||| |||||| || |||| Sbjct: 50169 ttctggttctttatgtctttgtaaatatcagtcatccacaagttttaatcttaagtctgc 50228 Query: 592 atgttcttgcgttactgtcatctgtaaagtgcacttattcctgttcgtttctgtgaataa 651 ||||||||| || | || | |||||| || ||| ||| ||| ||||||||||||| Sbjct: 50229 ctgttcttgccttgccgtgaagtgtaaattgttcttgctcccgtttctttctgtgaataa 50288 Query: 652 gatacagcctgtggttatttgttc 675 ||| |||||||| ||||||||| Sbjct: 50289 catatggcctgtgggtatttgttc 50312 Score = 163 bits (82), Expect = 1e-36 Identities = 94/98 (95%) Strand = Plus / Plus Query: 111 catggcggagctggtggggccgcgcgtgtacagctgctgcaactgccggaaccacgtctg 170 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 49021 catggcggagctggtgggtccgcgggtgtacagctgctgcaactgccggaaccacgtctg 49080 Query: 171 cctgcacgacgacatcatctccaaggcctttcaggtcg 208 ||| ||||||||||||||||||||||| |||||||||| Sbjct: 49081 cctccacgacgacatcatctccaaggcttttcaggtcg 49118 >gb|AY107512.1| Zea mays PCO144235 mRNA sequence Length = 722 Score = 287 bits (145), Expect = 3e-74 Identities = 208/229 (90%) Strand = Plus / Plus Query: 234 gggaggaatggccgtgcttttctgttttctcatgccatgaatgtagttgtgggggcgaag 293 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| Sbjct: 247 gggaggaatggccgtgcgtttctgttctctcatgccatgaacgtagttgtgggggcgaag 306 Query: 294 gaggataggcaacttatgacaggcctacacacagttgctgatatctactgcaatgattgc 353 |||||||| || || |||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 307 gaggatagacacctaatgacagggctacacacagttgctgatatctactgcaatgactgc 366 Query: 354 cgcgaggtgttaggctggaagtatgagagagcatacgaggagacacagaagtacaaggaa 413 || |||||||| ||||||||||||| ||||||||| || ||||| ||||| ||||||||| Sbjct: 367 cgtgaggtgttgggctggaagtatgtgagagcatatgaagagacgcagaaatacaaggaa 426 Query: 414 gggaagttcatatttgagaagtcaaagattgtcaaagagaactggtagt 462 || || |||||||| ||||||||||||||||| || || |||||||||| Sbjct: 427 ggaaaattcatattcgagaagtcaaagattgtgaaggaaaactggtagt 475 Score = 131 bits (66), Expect = 4e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 108 gtccatggcggagctggtggggccgcgcgtgtacagctgctgcaactgccggaaccacgt 167 ||||||||||||||| ||||| |||||||| ||||| ||||||| |||||||||||||| Sbjct: 150 gtccatggcggagcttgtgggaccgcgcgtctacagttgctgcacttgccggaaccacgt 209 Query: 168 ctgcctgcacgacgacatcatctccaaggcctttcagg 205 ||||| ||||||||||||||||||||||||||||||| Sbjct: 210 ttgccttcacgacgacatcatctccaaggcctttcagg 247