BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst024p13 (1008 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057328.1| Oryza sativa (japonica cultivar-group) Os03g... 311 3e-81 gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome... 311 3e-81 gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 311 3e-81 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 311 3e-81 emb|CT833432.1| Oryza sativa (indica cultivar-group) cDNA clone:... 238 4e-59 >ref|NM_001057328.1| Oryza sativa (japonica cultivar-group) Os03g0651800 (Os03g0651800) mRNA, complete cds Length = 669 Score = 311 bits (157), Expect = 3e-81 Identities = 361/427 (84%), Gaps = 4/427 (0%) Strand = Plus / Plus Query: 353 gacggcggcggacgtggacaagctaccggggctcaacaccctgggtgtgtccatggcgcg 412 |||||||||| |||||| | ||| |||||||| ||||| |||| |||||||||||||| Sbjct: 240 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 299 Query: 413 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 472 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 300 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 359 Query: 473 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 532 | | ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| Sbjct: 360 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 419 Query: 533 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 592 | ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 420 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 479 Query: 593 gaagaacagctgcgccaactcggccgccgtcgccatcgcggcgttcagcagccagacgca 652 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 480 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 536 Query: 653 gggcacgctgtccgtcgccgacgcgctcttcggcgccacgccgccactgcaggccgacgt 712 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 537 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 596 Query: 713 gcttgccccggacgttccagatcgacagcggcctcgtcgactccatcaagtccaagttcc 772 || || || || |||||||| ||||| ||||| | ||||| ||||||||||||||||||| Sbjct: 597 gc-tggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttcc 655 Query: 773 cacccaa 779 | ||||| Sbjct: 656 cgcccaa 662 Score = 208 bits (105), Expect = 3e-50 Identities = 150/165 (90%) Strand = Plus / Plus Query: 109 tcctggcgctcgccgccccctcgctggccggcgaccccgacatgctccaggacatttgcg 168 ||||||||||||||||| |||| || || |||||||||||||||||||||||| | |||| Sbjct: 38 tcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgcg 97 Query: 169 tcgccgattacaaatcccttcagggcccattgcggctgaacgggttcccgtgcaagaggc 228 ||||||||||||| ||||| | ||||| |||||||||||||| ||||||||||||||| Sbjct: 98 tcgccgattacaagtccctccgaggcccgctgcggctgaacgggatcccgtgcaagaggc 157 Query: 229 cggagaacgtgacggtgaacgacttcttcttcgacgggctgacga 273 |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 158 tggagaacgtgacggcgaacgacttcttcttcgacgggctgacga 202 >gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 311 bits (157), Expect = 3e-81 Identities = 361/427 (84%), Gaps = 4/427 (0%) Strand = Plus / Plus Query: 353 gacggcggcggacgtggacaagctaccggggctcaacaccctgggtgtgtccatggcgcg 412 |||||||||| |||||| | ||| |||||||| ||||| |||| |||||||||||||| Sbjct: 146677 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 146736 Query: 413 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 472 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 146737 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 146796 Query: 473 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 532 | | ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| Sbjct: 146797 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 146856 Query: 533 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 592 | ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 146857 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 146916 Query: 593 gaagaacagctgcgccaactcggccgccgtcgccatcgcggcgttcagcagccagacgca 652 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 146917 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 146973 Query: 653 gggcacgctgtccgtcgccgacgcgctcttcggcgccacgccgccactgcaggccgacgt 712 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 146974 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 147033 Query: 713 gcttgccccggacgttccagatcgacagcggcctcgtcgactccatcaagtccaagttcc 772 || || || || |||||||| ||||| ||||| | ||||| ||||||||||||||||||| Sbjct: 147034 gc-tggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttcc 147092 Query: 773 cacccaa 779 | ||||| Sbjct: 147093 cgcccaa 147099 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 199 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 258 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 146565 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 146624 Query: 259 tcgacgggctgacga 273 ||||||||||||||| Sbjct: 146625 tcgacgggctgacga 146639 Score = 101 bits (51), Expect = 5e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 109 tcctggcgctcgccgccccctcgctggccggcgaccccgacatgctccaggacatttgcg 168 ||||||||||||||||| |||| || || |||||||||||||||||||||||| | |||| Sbjct: 145775 tcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgcg 145834 Query: 169 tcgccgattacaaatccct 187 ||||||||||||| ||||| Sbjct: 145835 tcgccgattacaagtccct 145853 >gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 311 bits (157), Expect = 3e-81 Identities = 361/427 (84%), Gaps = 4/427 (0%) Strand = Plus / Plus Query: 353 gacggcggcggacgtggacaagctaccggggctcaacaccctgggtgtgtccatggcgcg 412 |||||||||| |||||| | ||| |||||||| ||||| |||| |||||||||||||| Sbjct: 62039 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 62098 Query: 413 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 472 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 62099 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 62158 Query: 473 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 532 | | ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| Sbjct: 62159 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 62218 Query: 533 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 592 | ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 62219 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 62278 Query: 593 gaagaacagctgcgccaactcggccgccgtcgccatcgcggcgttcagcagccagacgca 652 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 62279 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 62335 Query: 653 gggcacgctgtccgtcgccgacgcgctcttcggcgccacgccgccactgcaggccgacgt 712 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 62336 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 62395 Query: 713 gcttgccccggacgttccagatcgacagcggcctcgtcgactccatcaagtccaagttcc 772 || || || || |||||||| ||||| ||||| | ||||| ||||||||||||||||||| Sbjct: 62396 gc-tggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttcc 62454 Query: 773 cacccaa 779 | ||||| Sbjct: 62455 cgcccaa 62461 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 199 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 258 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 61927 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 61986 Query: 259 tcgacgggctgacga 273 ||||||||||||||| Sbjct: 61987 tcgacgggctgacga 62001 Score = 101 bits (51), Expect = 5e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 109 tcctggcgctcgccgccccctcgctggccggcgaccccgacatgctccaggacatttgcg 168 ||||||||||||||||| |||| || || |||||||||||||||||||||||| | |||| Sbjct: 61137 tcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgcg 61196 Query: 169 tcgccgattacaaatccct 187 ||||||||||||| ||||| Sbjct: 61197 tcgccgattacaagtccct 61215 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 311 bits (157), Expect = 3e-81 Identities = 361/427 (84%), Gaps = 4/427 (0%) Strand = Plus / Plus Query: 353 gacggcggcggacgtggacaagctaccggggctcaacaccctgggtgtgtccatggcgcg 412 |||||||||| |||||| | ||| |||||||| ||||| |||| |||||||||||||| Sbjct: 25121549 gacggcggcgagcgtggagaggctgccggggctgaacacgatgggggtgtccatggcgcg 25121608 Query: 413 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 472 |||||||||||||||| ||||||| | |||||||||||||||||||||||| || ||||| Sbjct: 25121609 gatcgactacgcgccgtgggggctcagcccgccgcacacccacccgcgcgccaccgagat 25121668 Query: 473 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 532 | | ||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| Sbjct: 25121669 catgttcgtcgccgagggcaccctcgacgtcggcttcgtcaccaccgccaacaagctctt 25121728 Query: 533 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 592 | ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||| Sbjct: 25121729 cacccgcaccgtcagcaagggggaggtgttcgtcttcccgcgcggcctcgtccacttcca 25121788 Query: 593 gaagaacagctgcgccaactcggccgccgtcgccatcgcggcgttcagcagccagacgca 652 || ||||| ||| |||| || | || |||||||||| || |||| ||||||| | Sbjct: 25121789 gaggaaca---gcggcaacacgtcggcgctcgccatcgccgccttcaacagccagctccc 25121845 Query: 653 gggcacgctgtccgtcgccgacgcgctcttcggcgccacgccgccactgcaggccgacgt 712 || |||| |||| |||||||| |||||||||||||| ||||||| |||| | | ||| Sbjct: 25121846 cgggacgcagtccatcgccgacacgctcttcggcgccgcgccgccgctgccgtcggacac 25121905 Query: 713 gcttgccccggacgttccagatcgacagcggcctcgtcgactccatcaagtccaagttcc 772 || || || || |||||||| ||||| ||||| | ||||| ||||||||||||||||||| Sbjct: 25121906 gc-tggccagggcgttccaggtcgacggcggcatggtcgagtccatcaagtccaagttcc 25121964 Query: 773 cacccaa 779 | ||||| Sbjct: 25121965 cgcccaa 25121971 Score = 125 bits (63), Expect = 4e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 199 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 258 |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 25121437 tgcggctgaacgggatcccgtgcaagaggctggagaacgtgacggcgaacgacttcttct 25121496 Query: 259 tcgacgggctgacga 273 ||||||||||||||| Sbjct: 25121497 tcgacgggctgacga 25121511 Score = 101 bits (51), Expect = 5e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 109 tcctggcgctcgccgccccctcgctggccggcgaccccgacatgctccaggacatttgcg 168 ||||||||||||||||| |||| || || |||||||||||||||||||||||| | |||| Sbjct: 25120647 tcctggcgctcgccgccacctccctcgcaggcgaccccgacatgctccaggacgtctgcg 25120706 Query: 169 tcgccgattacaaatccct 187 ||||||||||||| ||||| Sbjct: 25120707 tcgccgattacaagtccct 25120725 >emb|CT833432.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007O02, full insert sequence Length = 1034 Score = 238 bits (120), Expect = 4e-59 Identities = 216/248 (87%) Strand = Plus / Plus Query: 353 gacggcggcggacgtggacaagctaccggggctcaacaccctgggtgtgtccatggcgcg 412 |||||||||| |||||| | || |||||||| ||||| |||| |||||||||||||| Sbjct: 498 gacggcggcgagcgtggagagcctgccggggctgaacacgatgggggtgtccatggcgcg 557 Query: 413 gatcgactacgcgccgggggggctgaacccgccgcacacccacccgcgcgctacggagat 472 |||||||||||||| ||||||||||||| |||||||| ||||| || || || ||||| Sbjct: 558 tatcgactacgcgccatgggggctgaacccaccgcacacgcacccccgtgccaccgagat 617 Query: 473 cgtcttcgtgctcgagggctccctcgacgtcggcttcgtcaccacggccaacaggctctt 532 | ||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||| Sbjct: 618 catcttcgtcgtcgagggctctctcgacgtcggcttcgtcaccaccgccaacaagctctt 677 Query: 533 cgcccgcaccgtccgcaagggcgaggtgttcgtcttcccccgcggcctcctccacttcca 592 | ||||||||||| ||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 678 cacccgcaccgtctgcaagggggaggtgttcgtcttcccgcgggggctcgtccacttcca 737 Query: 593 gaagaaca 600 |||||||| Sbjct: 738 gaagaaca 745 Score = 111 bits (56), Expect = 6e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 199 tgcggctgaacgggttcccgtgcaagaggccggagaacgtgacggtgaacgacttcttct 258 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 386 tgcggctgaacgggttcccgtgcaagaggatagagaacgtgacggcgaacgacttcttct 445 Query: 259 tcgacgggctga 270 |||||||||||| Sbjct: 446 tcgacgggctga 457 Score = 87.7 bits (44), Expect = 8e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 112 tggcgctcgccgccccctcgctggccggcgaccccgacatgctccaggacatttgcgtcg 171 |||||||||||||| |||| || ||||||||||| ||||||||||||||| | ||||||| Sbjct: 179 tggcgctcgccgccacctccctcgccggcgacccggacatgctccaggacgtctgcgtcg 238 Query: 172 ccgattacaaatccct 187 |||| ||||| ||||| Sbjct: 239 ccgactacaagtccct 254