BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023g24 (982 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ246061.1| Zea mays clone 13260 mRNA sequence 624 e-175 ref|NM_001053696.1| Oryza sativa (japonica cultivar-group) Os02g... 577 e-161 dbj|AK103450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 577 e-161 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 153 2e-33 dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic D... 153 2e-33 >gb|DQ246061.1| Zea mays clone 13260 mRNA sequence Length = 984 Score = 624 bits (315), Expect = e-175 Identities = 474/527 (89%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 283 catggacaagatgcggggcgctctggagcgggccaagatgctggtgggcatggaggtcga 342 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 94 catggacacgatgcggggcgcgctggagcgggccaagatgctggtgggcatggaggtcga 153 Query: 343 tgaggagtccgcgctgccgccgcccgaggagcagtccttcttcgacgacattaaccgcca 402 |||||||||||| |||| |||||||||||||||||||||||||||||||| || || || Sbjct: 154 cgaggagtccgcgttgccaccgcccgaggagcagtccttcttcgacgacatcaatcggca 213 Query: 403 ctgcaccctcaccaccacccagaggctgtacggtttcgcgatatgcttggctgccggttt 462 |||||||||| |||||| |||||||| || |||||||||||||||||||||||||| | Sbjct: 214 ttgcaccctcaacaccactcagaggctctatggtttcgcgatatgcttggctgccggact 273 Query: 463 gacatgcactttcttgtcaatgcttgtgttcttcaatccagtgaaatttgggttaacatt 522 ||| ||||| ||||||||||||||||| |||||||||||||||||||||||| || |||| Sbjct: 274 gacgtgcacattcttgtcaatgcttgtcttcttcaatccagtgaaatttggggtagcatt 333 Query: 523 cacccttggcaatttgatggcacttgga-----agcatttcttataggtcccaaaaggca 577 ||||||||||||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 334 cacccttggcaatttgatggcccttggaagtacagcatttctcataggccccaaaagaca 393 Query: 578 attcgatatgatgcttgattctgcgcgaatatatgccactgctatatacattgcaagcat 637 || ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 394 gtttgatatgatgcttgattctgtgcgaatatatgccactgctatatatattgcaagcat 453 Query: 638 cataattgctctattctgcgctctctatgttcacagcaagctactgactctacttgccat 697 |||||||||||||||||| ||| |||| |||| ||||||||| ||||||||| | ||||| Sbjct: 454 cataattgctctattctgtgctatctacgttcgcagcaagctgctgactctagtggccat 513 Query: 698 cattttggaatttggcgcccttgtttggtacagtctaagctatataccttttgcacggtc 757 ||||||||||||||| |||||| |||||||||| || ||||| |||||||| ||| |||| Sbjct: 514 cattttggaatttggtgcccttatttggtacagccttagctacatacctttcgcaaggtc 573 Query: 758 aattgtttcgaaagtgatgacatcttgcttcgacaccgaattctaga 804 ||||| ||||| ||||||||||| ||||||||||| || ||||||| Sbjct: 574 gattgtgtcgaaggtgatgacatcgtgcttcgacactgatttctaga 620 >ref|NM_001053696.1| Oryza sativa (japonica cultivar-group) Os02g0564500 (Os02g0564500) mRNA, complete cds Length = 982 Score = 577 bits (291), Expect = e-161 Identities = 482/547 (88%), Gaps = 14/547 (2%) Strand = Plus / Plus Query: 281 ggcatggacaagatgcggggcgctctggagcgggccaagatgctggtgggcatggaggtc 340 |||||||||| |||| |||| || ||||||||||| | |||||||||||| |||||||| Sbjct: 189 ggcatggacacgatgaggggggcgctggagcgggcgaggatgctggtggggatggaggtg 248 Query: 341 gatgaggagtccgcgctgccgccgcccgaggagcagtccttcttcgacgacattaaccgc 400 || |||||||| ||| || |||||||||||||||||||||||| | | |||| Sbjct: 249 gacgaggagtcggcg---------ccggaggagcagtccttcttcgacgacgtcacccgc 299 Query: 401 cactgcaccctcaccaccacccagaggctgtacggtttcgcgatatgcttggctgccggt 460 ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 300 aactgcgccctcaccaccacccagaggctgtacggcttcgcgatatgcttggctgccgga 359 Query: 461 ttgacatgcactttcttgtcaatgcttgtgttcttcaatccagtgaaatttgggttaaca 520 ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||| ||||| Sbjct: 360 ttgacgtgcaccttcttgtcaatgcttgttttcttcaatcctgtgaaattcggggtaaca 419 Query: 521 ttcacccttggcaatttgatggcacttggaagca-----tttcttataggtcccaaaagg 575 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 420 ttcacccttggcaatttgatggcacttggaagtacagcgtttcttataggtcccaaaagg 479 Query: 576 caattcgatatgatgcttgattctgcgcgaatatatgccactgctatatacattgcaagc 635 ||||| || |||||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 480 caatttgacatgatgcttgattctgtgcggatatatgcaactgctgtatacattgcaagc 539 Query: 636 atcataattgctctattctgcgctctctatgttcacagcaagctactgactctacttgcc 695 |||||||||||||| ||||| ||||||| ||| ||||||||||| ||||||||||||||| Sbjct: 540 atcataattgctctgttctgtgctctctttgtgcacagcaagctgctgactctacttgcc 599 Query: 696 atcattttggaatttggcgcccttgtttggtacagtctaagctatataccttttgcacgg 755 || || ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 600 attatcttggaatttggtgctcttgtttggtacagtctaagctatataccctttgcacgc 659 Query: 756 tcaattgtttcgaaagtgatgacatcttgcttcgacaccgaattctagagcaaccatctt 815 || |||||||||| |||||||| |||||||||||||| |||||||||| |||||| | Sbjct: 660 tcggttgtttcgaaggtgatgacgtcttgcttcgacactgaattctagaatgaccatcct 719 Query: 816 gatctac 822 ||||||| Sbjct: 720 gatctac 726 >dbj|AK103450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129I06, full insert sequence Length = 985 Score = 577 bits (291), Expect = e-161 Identities = 482/547 (88%), Gaps = 14/547 (2%) Strand = Plus / Plus Query: 281 ggcatggacaagatgcggggcgctctggagcgggccaagatgctggtgggcatggaggtc 340 |||||||||| |||| |||| || ||||||||||| | |||||||||||| |||||||| Sbjct: 192 ggcatggacacgatgaggggggcgctggagcgggcgaggatgctggtggggatggaggtg 251 Query: 341 gatgaggagtccgcgctgccgccgcccgaggagcagtccttcttcgacgacattaaccgc 400 || |||||||| ||| || |||||||||||||||||||||||| | | |||| Sbjct: 252 gacgaggagtcggcg---------ccggaggagcagtccttcttcgacgacgtcacccgc 302 Query: 401 cactgcaccctcaccaccacccagaggctgtacggtttcgcgatatgcttggctgccggt 460 ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 303 aactgcgccctcaccaccacccagaggctgtacggcttcgcgatatgcttggctgccgga 362 Query: 461 ttgacatgcactttcttgtcaatgcttgtgttcttcaatccagtgaaatttgggttaaca 520 ||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||| ||||| Sbjct: 363 ttgacgtgcaccttcttgtcaatgcttgttttcttcaatcctgtgaaattcggggtaaca 422 Query: 521 ttcacccttggcaatttgatggcacttggaagca-----tttcttataggtcccaaaagg 575 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 423 ttcacccttggcaatttgatggcacttggaagtacagcgtttcttataggtcccaaaagg 482 Query: 576 caattcgatatgatgcttgattctgcgcgaatatatgccactgctatatacattgcaagc 635 ||||| || |||||||||||||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 483 caatttgacatgatgcttgattctgtgcggatatatgcaactgctgtatacattgcaagc 542 Query: 636 atcataattgctctattctgcgctctctatgttcacagcaagctactgactctacttgcc 695 |||||||||||||| ||||| ||||||| ||| ||||||||||| ||||||||||||||| Sbjct: 543 atcataattgctctgttctgtgctctctttgtgcacagcaagctgctgactctacttgcc 602 Query: 696 atcattttggaatttggcgcccttgtttggtacagtctaagctatataccttttgcacgg 755 || || ||||||||||| || ||||||||||||||||||||||||||||| |||||||| Sbjct: 603 attatcttggaatttggtgctcttgtttggtacagtctaagctatataccctttgcacgc 662 Query: 756 tcaattgtttcgaaagtgatgacatcttgcttcgacaccgaattctagagcaaccatctt 815 || |||||||||| |||||||| |||||||||||||| |||||||||| |||||| | Sbjct: 663 tcggttgtttcgaaggtgatgacgtcttgcttcgacactgaattctagaatgaccatcct 722 Query: 816 gatctac 822 ||||||| Sbjct: 723 gatctac 729 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 153 bits (77), Expect = 2e-33 Identities = 101/109 (92%) Strand = Plus / Minus Query: 555 tttcttataggtcccaaaaggcaattcgatatgatgcttgattctgcgcgaatatatgcc 614 |||||||||||||||||||||||||| || |||||||||||||||| ||| |||||||| Sbjct: 21452574 tttcttataggtcccaaaaggcaatttgacatgatgcttgattctgtgcggatatatgca 21452515 Query: 615 actgctatatacattgcaagcatcataattgctctattctgcgctctct 663 |||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 21452514 actgctgtatacattgcaagcatcataattgctctgttctgtgctctct 21452466 Score = 117 bits (59), Expect = 9e-23 Identities = 71/75 (94%) Strand = Plus / Minus Query: 478 gtcaatgcttgtgttcttcaatccagtgaaatttgggttaacattcacccttggcaattt 537 |||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||| Sbjct: 21453080 gtcaatgcttgttttcttcaatcctgtgaaattcggggtaacattcacccttggcaattt 21453021 Query: 538 gatggcacttggaag 552 ||||||||||||||| Sbjct: 21453020 gatggcacttggaag 21453006 Score = 109 bits (55), Expect = 2e-20 Identities = 88/99 (88%) Strand = Plus / Minus Query: 724 ggtacagtctaagctatataccttttgcacggtcaattgtttcgaaagtgatgacatctt 783 |||||||||||||||||||||| |||||||| || |||||||||| |||||||| |||| Sbjct: 21452002 ggtacagtctaagctatataccctttgcacgctcggttgtttcgaaggtgatgacgtctt 21451943 Query: 784 gcttcgacaccgaattctagagcaaccatcttgatctac 822 |||||||||| |||||||||| |||||| |||||||| Sbjct: 21451942 gcttcgacactgaattctagaatgaccatcctgatctac 21451904 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 422 cagaggctgtacggtttcgcgatatgcttggctgccggtttgacatgcactttcttg 478 |||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 21453906 cagaggctgtacggcttcgcgatatgcttggctgccggattgacgtgcaccttcttg 21453850 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 669 cacagcaagctactgactctacttgccatcattttggaatttggcgcccttgtttggta 727 ||||||||||| ||||||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 21452363 cacagcaagctgctgactctacttgccattatcttggaatttggtgctcttgtttggta 21452305 >dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 153 bits (77), Expect = 2e-33 Identities = 101/109 (92%) Strand = Plus / Minus Query: 555 tttcttataggtcccaaaaggcaattcgatatgatgcttgattctgcgcgaatatatgcc 614 |||||||||||||||||||||||||| || |||||||||||||||| ||| |||||||| Sbjct: 47501 tttcttataggtcccaaaaggcaatttgacatgatgcttgattctgtgcggatatatgca 47442 Query: 615 actgctatatacattgcaagcatcataattgctctattctgcgctctct 663 |||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 47441 actgctgtatacattgcaagcatcataattgctctgttctgtgctctct 47393 Score = 117 bits (59), Expect = 9e-23 Identities = 71/75 (94%) Strand = Plus / Minus Query: 478 gtcaatgcttgtgttcttcaatccagtgaaatttgggttaacattcacccttggcaattt 537 |||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||| Sbjct: 48007 gtcaatgcttgttttcttcaatcctgtgaaattcggggtaacattcacccttggcaattt 47948 Query: 538 gatggcacttggaag 552 ||||||||||||||| Sbjct: 47947 gatggcacttggaag 47933 Score = 109 bits (55), Expect = 2e-20 Identities = 88/99 (88%) Strand = Plus / Minus Query: 724 ggtacagtctaagctatataccttttgcacggtcaattgtttcgaaagtgatgacatctt 783 |||||||||||||||||||||| |||||||| || |||||||||| |||||||| |||| Sbjct: 46929 ggtacagtctaagctatataccctttgcacgctcggttgtttcgaaggtgatgacgtctt 46870 Query: 784 gcttcgacaccgaattctagagcaaccatcttgatctac 822 |||||||||| |||||||||| |||||| |||||||| Sbjct: 46869 gcttcgacactgaattctagaatgaccatcctgatctac 46831 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 422 cagaggctgtacggtttcgcgatatgcttggctgccggtttgacatgcactttcttg 478 |||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 48833 cagaggctgtacggcttcgcgatatgcttggctgccggattgacgtgcaccttcttg 48777 Score = 77.8 bits (39), Expect = 8e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 669 cacagcaagctactgactctacttgccatcattttggaatttggcgcccttgtttggta 727 ||||||||||| ||||||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 47290 cacagcaagctgctgactctacttgccattatcttggaatttggtgctcttgtttggta 47232