BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023g10 (874 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001053699.1| Oryza sativa (japonica cultivar-group) Os02g... 502 e-138 dbj|AK106382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 502 e-138 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 256 1e-64 dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic D... 256 1e-64 >ref|NM_001053699.1| Oryza sativa (japonica cultivar-group) Os02g0565100 (Os02g0565100) mRNA, complete cds Length = 1033 Score = 502 bits (253), Expect = e-138 Identities = 400/449 (89%) Strand = Plus / Plus Query: 201 tcgagacggagaggacgctggcgatgatcaaaccggacggtttgtttggtaactacacgg 260 |||||| |||||||||||||||||||||||||||||||||| | | |||||| ||||||| Sbjct: 158 tcgagagggagaggacgctggcgatgatcaaaccggacggtctatctggtaattacacgg 217 Query: 261 agaaaatcaaggagatcatcttggagtccggatttgatattgttaaagaggcaatggttc 320 ||| |||||||||| ||||||||||||| ||||||||||| || ||||||||| |||||| Sbjct: 218 agagaatcaaggaggtcatcttggagtctggatttgatatcgtcaaagaggcagtggttc 277 Query: 321 ggctggatgcagagagggcatctctcttctacgcggagcattcagggagaagcttcttcg 380 ||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| | Sbjct: 278 agctggatgcggagagggcatcactcttctatgcggagcattctgggagaagcttctttg 337 Query: 381 acagcctagtgaagtatatgacaagtggtcctgttctcgcgatggttttggaaaggtatg 440 |||| || ||||||||||||||||||||||| ||||||| ||| || |||||||| | Sbjct: 338 acagtctggtgaagtatatgacaagtggtccagttctcgttatgattctggaaaggcccg 397 Query: 441 atgccatctcacattggcgagctttgattgggccaactgatgcaagaaaagctaaaactt 500 ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| || Sbjct: 398 atgccatctcacactggcgagttttgattgggccaactgatgcaagaaaggctaaaattt 457 Query: 501 ctcatcctagcagcattagagcaatgtgcgggttggactctgaacaaaattgtgttcatg 560 || |||||| ||||||||||||||||| || ||||||| || |||| ||||| |||| Sbjct: 458 ctaatcctaatagcattagagcaatgtgtggagtggactcagagaaaaactgtgtgcatg 517 Query: 561 gttcagattcactgcaatctgcagccagagaaatttcatttttcttcggagatgttaaat 620 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 518 gttcagattcaccacaatctgcagccagagaaatttcatttttctttggagatgttagat 577 Query: 621 ctgaaactgtggaacatgacgagttgtag 649 |||| |||||||||||||| ||| ||||| Sbjct: 578 ctgatactgtggaacatgatgagctgtag 606 >dbj|AK106382.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E02, full insert sequence Length = 1033 Score = 502 bits (253), Expect = e-138 Identities = 400/449 (89%) Strand = Plus / Plus Query: 201 tcgagacggagaggacgctggcgatgatcaaaccggacggtttgtttggtaactacacgg 260 |||||| |||||||||||||||||||||||||||||||||| | | |||||| ||||||| Sbjct: 158 tcgagagggagaggacgctggcgatgatcaaaccggacggtctatctggtaattacacgg 217 Query: 261 agaaaatcaaggagatcatcttggagtccggatttgatattgttaaagaggcaatggttc 320 ||| |||||||||| ||||||||||||| ||||||||||| || ||||||||| |||||| Sbjct: 218 agagaatcaaggaggtcatcttggagtctggatttgatatcgtcaaagaggcagtggttc 277 Query: 321 ggctggatgcagagagggcatctctcttctacgcggagcattcagggagaagcttcttcg 380 ||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| | Sbjct: 278 agctggatgcggagagggcatcactcttctatgcggagcattctgggagaagcttctttg 337 Query: 381 acagcctagtgaagtatatgacaagtggtcctgttctcgcgatggttttggaaaggtatg 440 |||| || ||||||||||||||||||||||| ||||||| ||| || |||||||| | Sbjct: 338 acagtctggtgaagtatatgacaagtggtccagttctcgttatgattctggaaaggcccg 397 Query: 441 atgccatctcacattggcgagctttgattgggccaactgatgcaagaaaagctaaaactt 500 ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| || Sbjct: 398 atgccatctcacactggcgagttttgattgggccaactgatgcaagaaaggctaaaattt 457 Query: 501 ctcatcctagcagcattagagcaatgtgcgggttggactctgaacaaaattgtgttcatg 560 || |||||| ||||||||||||||||| || ||||||| || |||| ||||| |||| Sbjct: 458 ctaatcctaatagcattagagcaatgtgtggagtggactcagagaaaaactgtgtgcatg 517 Query: 561 gttcagattcactgcaatctgcagccagagaaatttcatttttcttcggagatgttaaat 620 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 518 gttcagattcaccacaatctgcagccagagaaatttcatttttctttggagatgttagat 577 Query: 621 ctgaaactgtggaacatgacgagttgtag 649 |||| |||||||||||||| ||| ||||| Sbjct: 578 ctgatactgtggaacatgatgagctgtag 606 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 256 bits (129), Expect = 1e-64 Identities = 186/205 (90%) Strand = Plus / Plus Query: 201 tcgagacggagaggacgctggcgatgatcaaaccggacggtttgtttggtaactacacgg 260 |||||| |||||||||||||||||||||||||||||||||| | | |||||| ||||||| Sbjct: 21473121 tcgagagggagaggacgctggcgatgatcaaaccggacggtctatctggtaattacacgg 21473180 Query: 261 agaaaatcaaggagatcatcttggagtccggatttgatattgttaaagaggcaatggttc 320 ||| |||||||||| ||||||||||||| ||||||||||| || ||||||||| |||||| Sbjct: 21473181 agagaatcaaggaggtcatcttggagtctggatttgatatcgtcaaagaggcagtggttc 21473240 Query: 321 ggctggatgcagagagggcatctctcttctacgcggagcattcagggagaagcttcttcg 380 ||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| | Sbjct: 21473241 agctggatgcggagagggcatcactcttctatgcggagcattctgggagaagcttctttg 21473300 Query: 381 acagcctagtgaagtatatgacaag 405 |||| || ||||||||||||||||| Sbjct: 21473301 acagtctggtgaagtatatgacaag 21473325 Score = 129 bits (65), Expect = 2e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 511 cagcattagagcaatgtgcgggttggactctgaacaaaattgtgttcatggttcagattc 570 |||||||||||||||||| || ||||||| || |||| ||||| |||||||||||||| Sbjct: 21474512 cagcattagagcaatgtgtggagtggactcagagaaaaactgtgtgcatggttcagattc 21474571 Query: 571 actgcaatctgcagccagagaaatttcatttttcttcggagatgttaaatctg 623 || |||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 21474572 accacaatctgcagccagagaaatttcatttttctttggagatgttagatctg 21474624 Score = 107 bits (54), Expect = 8e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 404 agtggtcctgttctcgcgatggttttggaaaggtatgatgccatctcacattggcgagct 463 |||||||| ||||||| ||| || |||||||| |||||||||||||| ||||||| | Sbjct: 21474185 agtggtccagttctcgttatgattctggaaaggcccgatgccatctcacactggcgagtt 21474244 Query: 464 ttgattgggccaactgatgcaagaaaagctaaaacttctcatccta 509 |||||||||||||||||||||||||| ||||||| |||| |||||| Sbjct: 21474245 ttgattgggccaactgatgcaagaaaggctaaaatttctaatccta 21474290 >dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 256 bits (129), Expect = 1e-64 Identities = 186/205 (90%) Strand = Plus / Plus Query: 201 tcgagacggagaggacgctggcgatgatcaaaccggacggtttgtttggtaactacacgg 260 |||||| |||||||||||||||||||||||||||||||||| | | |||||| ||||||| Sbjct: 68048 tcgagagggagaggacgctggcgatgatcaaaccggacggtctatctggtaattacacgg 68107 Query: 261 agaaaatcaaggagatcatcttggagtccggatttgatattgttaaagaggcaatggttc 320 ||| |||||||||| ||||||||||||| ||||||||||| || ||||||||| |||||| Sbjct: 68108 agagaatcaaggaggtcatcttggagtctggatttgatatcgtcaaagaggcagtggttc 68167 Query: 321 ggctggatgcagagagggcatctctcttctacgcggagcattcagggagaagcttcttcg 380 ||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||| | Sbjct: 68168 agctggatgcggagagggcatcactcttctatgcggagcattctgggagaagcttctttg 68227 Query: 381 acagcctagtgaagtatatgacaag 405 |||| || ||||||||||||||||| Sbjct: 68228 acagtctggtgaagtatatgacaag 68252 Score = 129 bits (65), Expect = 2e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 511 cagcattagagcaatgtgcgggttggactctgaacaaaattgtgttcatggttcagattc 570 |||||||||||||||||| || ||||||| || |||| ||||| |||||||||||||| Sbjct: 69439 cagcattagagcaatgtgtggagtggactcagagaaaaactgtgtgcatggttcagattc 69498 Query: 571 actgcaatctgcagccagagaaatttcatttttcttcggagatgttaaatctg 623 || |||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 69499 accacaatctgcagccagagaaatttcatttttctttggagatgttagatctg 69551 Score = 107 bits (54), Expect = 8e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 404 agtggtcctgttctcgcgatggttttggaaaggtatgatgccatctcacattggcgagct 463 |||||||| ||||||| ||| || |||||||| |||||||||||||| ||||||| | Sbjct: 69112 agtggtccagttctcgttatgattctggaaaggcccgatgccatctcacactggcgagtt 69171 Query: 464 ttgattgggccaactgatgcaagaaaagctaaaacttctcatccta 509 |||||||||||||||||||||||||| ||||||| |||| |||||| Sbjct: 69172 ttgattgggccaactgatgcaagaaaggctaaaatttctaatccta 69217