BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023f15 (871 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT833548.1| Oryza sativa (indica cultivar-group) cDNA clone:... 402 e-109 ref|NM_001056810.1| Oryza sativa (japonica cultivar-group) Os03g... 396 e-107 dbj|AK120174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107 dbj|AB025187.1| Oryza sativa (japonica cultivar-group) mRNA for ... 396 e-107 gb|BT017421.1| Zea mays clone EL01N0402E11.c mRNA sequence 315 2e-82 >emb|CT833548.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA020G08, full insert sequence Length = 834 Score = 402 bits (203), Expect = e-109 Identities = 271/293 (92%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 266 gcagaggaaacaagtgagacttctggggaggaagaggctgaggagacaccagagattaag 325 ||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||| Sbjct: 323 gcagaggaaacaactgagactgctg---aggaagaggctgaggagaaaccagagattaag 379 Query: 326 attgaaacagctccagcagattttcgtttcccaacaacaaatcaaacaaggcactgtttc 385 || |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 380 atcgaaacagctccagcagatttccgtttcccgacaacaaatcaaacaaggcactgtttc 439 Query: 386 acacgctatgttgagtatcataggtgtgtagctgcgaaaggagacggtgctcctgagtgc 445 |||||||||||||||||||| ||||| |||||||||||||| || | |||||||||||| Sbjct: 440 acacgctatgttgagtatcacaggtgcgtagctgcgaaaggggaggatgctcctgagtgt 499 Query: 446 gataagttcgcaaaatactatcgatctctttgccctggtgaatgggttgagcgctggaac 505 |||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 500 gataagtttgcaaaatactatcgatctctttgcccaggcgaatgggttgagcgttggaat 559 Query: 506 gagcaacgggaaaacggcaccttccctggacctctgtaaccgtgtgcaaaggg 558 ||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 560 gagcaacgggaaaacggcaccttccctggacctctgtaagcatgtgcaaaggg 612 Score = 81.8 bits (41), Expect = 4e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 42 ccatggccgccgaagccaaggccccgtccctcgcagaggaatattcacttccaccacaag 101 |||||||||||||||||||||||||||| ||||| ||||| || |||||||| ||||| | Sbjct: 87 ccatggccgccgaagccaaggccccgtcgctcgccgaggagtactcacttcctccacagg 146 Query: 102 aggctccagtggaaaaagcag 122 | || ||||| ||||| |||| Sbjct: 147 aagccccagttgaaaaggcag 167 >ref|NM_001056810.1| Oryza sativa (japonica cultivar-group) Os03g0390400 (Os03g0390400) mRNA, complete cds Length = 930 Score = 396 bits (200), Expect = e-107 Identities = 271/294 (92%), Gaps = 3/294 (1%) Strand = Plus / Plus Query: 265 agcagaggaaacaagtgagacttctggggaggaagaggctgaggagacaccagagattaa 324 |||||||||||| | ||||||| ||| |||||||||||||||||| |||||||||||| Sbjct: 340 agcagaggaaacgaatgagactgctg---aggaagaggctgaggagaaaccagagattaa 396 Query: 325 gattgaaacagctccagcagattttcgtttcccaacaacaaatcaaacaaggcactgttt 384 ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 397 gatcgaaacggctccagcagatttccgtttcccaacaacaaatcaaacaaggcactgttt 456 Query: 385 cacacgctatgttgagtatcataggtgtgtagctgcgaaaggagacggtgctcctgagtg 444 ||||||||||||||||||||| ||||| |||||||||||||| || | |||||||||||| Sbjct: 457 cacacgctatgttgagtatcacaggtgcgtagctgcgaaaggggaggatgctcctgagtg 516 Query: 445 cgataagttcgcaaaatactatcgatctctttgccctggtgaatgggttgagcgctggaa 504 |||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 517 tgataagtttgcaaaatactatcgatctctttgcccaggcgaatgggttgagcgttggaa 576 Query: 505 cgagcaacgggaaaacggcaccttccctggacctctgtaaccgtgtgcaaaggg 558 ||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 577 tgagcaacgggaaaacggcaccttccctggacctctgtaagcatgtgcaaaggg 630 Score = 89.7 bits (45), Expect = 2e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 42 ccatggccgccgaagccaaggccccgtccctcgcagaggaatattcacttccaccacaag 101 |||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 105 ccatggccgccgaagccaaggccccgtcgctcgccgaggaatactcacttcctccacagg 164 Query: 102 aggctccagtggaaaaagcag 122 | || ||||| ||||| |||| Sbjct: 165 aagccccagttgaaaaggcag 185 >dbj|AK120174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033A17, full insert sequence Length = 887 Score = 396 bits (200), Expect = e-107 Identities = 271/294 (92%), Gaps = 3/294 (1%) Strand = Plus / Plus Query: 265 agcagaggaaacaagtgagacttctggggaggaagaggctgaggagacaccagagattaa 324 |||||||||||| | ||||||| ||| |||||||||||||||||| |||||||||||| Sbjct: 330 agcagaggaaacgaatgagactgctg---aggaagaggctgaggagaaaccagagattaa 386 Query: 325 gattgaaacagctccagcagattttcgtttcccaacaacaaatcaaacaaggcactgttt 384 ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 387 gatcgaaacggctccagcagatttccgtttcccaacaacaaatcaaacaaggcactgttt 446 Query: 385 cacacgctatgttgagtatcataggtgtgtagctgcgaaaggagacggtgctcctgagtg 444 ||||||||||||||||||||| ||||| |||||||||||||| || | |||||||||||| Sbjct: 447 cacacgctatgttgagtatcacaggtgcgtagctgcgaaaggggaggatgctcctgagtg 506 Query: 445 cgataagttcgcaaaatactatcgatctctttgccctggtgaatgggttgagcgctggaa 504 |||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 507 tgataagtttgcaaaatactatcgatctctttgcccaggcgaatgggttgagcgttggaa 566 Query: 505 cgagcaacgggaaaacggcaccttccctggacctctgtaaccgtgtgcaaaggg 558 ||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 567 tgagcaacgggaaaacggcaccttccctggacctctgtaagcatgtgcaaaggg 620 Score = 89.7 bits (45), Expect = 2e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 42 ccatggccgccgaagccaaggccccgtccctcgcagaggaatattcacttccaccacaag 101 |||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 95 ccatggccgccgaagccaaggccccgtcgctcgccgaggaatactcacttcctccacagg 154 Query: 102 aggctccagtggaaaaagcag 122 | || ||||| ||||| |||| Sbjct: 155 aagccccagttgaaaaggcag 175 >dbj|AB025187.1| Oryza sativa (japonica cultivar-group) mRNA for cytochrome c oxidase subunit 6b-1, complete cds Length = 951 Score = 396 bits (200), Expect = e-107 Identities = 271/294 (92%), Gaps = 3/294 (1%) Strand = Plus / Plus Query: 265 agcagaggaaacaagtgagacttctggggaggaagaggctgaggagacaccagagattaa 324 |||||||||||| | ||||||| ||| |||||||||||||||||| |||||||||||| Sbjct: 340 agcagaggaaacgaatgagactgctg---aggaagaggctgaggagaaaccagagattaa 396 Query: 325 gattgaaacagctccagcagattttcgtttcccaacaacaaatcaaacaaggcactgttt 384 ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 397 gatcgaaacggctccagcagatttccgtttcccaacaacaaatcaaacaaggcactgttt 456 Query: 385 cacacgctatgttgagtatcataggtgtgtagctgcgaaaggagacggtgctcctgagtg 444 ||||||||||||||||||||| ||||| |||||||||||||| || | |||||||||||| Sbjct: 457 cacacgctatgttgagtatcacaggtgcgtagctgcgaaaggggaggatgctcctgagtg 516 Query: 445 cgataagttcgcaaaatactatcgatctctttgccctggtgaatgggttgagcgctggaa 504 |||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 517 tgataagtttgcaaaatactatcgatctctttgcccaggcgaatgggttgagcgttggaa 576 Query: 505 cgagcaacgggaaaacggcaccttccctggacctctgtaaccgtgtgcaaaggg 558 ||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 577 tgagcaacgggaaaacggcaccttccctggacctctgtaagcatgtgcaaaggg 630 Score = 89.7 bits (45), Expect = 2e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 42 ccatggccgccgaagccaaggccccgtccctcgcagaggaatattcacttccaccacaag 101 |||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| | Sbjct: 105 ccatggccgccgaagccaaggccccgtcgctcgccgaggaatactcacttcctccacagg 164 Query: 102 aggctccagtggaaaaagcag 122 | || ||||| ||||| |||| Sbjct: 165 aagccccagttgaaaaggcag 185 >gb|BT017421.1| Zea mays clone EL01N0402E11.c mRNA sequence Length = 832 Score = 315 bits (159), Expect = 2e-82 Identities = 248/277 (89%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 268 agaggaaacaagtgagacttctggggaggaagaggctgaggagacaccagagattaagat 327 ||||||| ||||||||||| | | |||||||||||||||| | ||| ||||| ||||| Sbjct: 307 agaggaagcaagtgagactaccgaggaggaagaggctgagaa---acctgagatcaagat 363 Query: 328 tgaaacagctccagcagattttcgtttcccaacaacaaatcaaacaaggcactgtttcac 387 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 364 cgaaacagctccagcagattttcgtttcccaacaacaaaccaaacaaggcattgtttcac 423 Query: 388 acgctatgttgagtatcataggtgtgtagctgcgaaaggagacggtgctcctgagtgcga 447 |||||||||||| ||||| |||||||| ||||| ||||| || | ||| |||||||| || Sbjct: 424 acgctatgttgaatatcacaggtgtgtggctgcaaaaggtgaggatgcacctgagtgtga 483 Query: 448 taagttcgcaaaatactatcgatctctttgccctggtgaatgggttgagcgctggaacga 507 ||||||||| || ||||||||||| || ||||| |||||||||||||| ||||||||||| Sbjct: 484 taagttcgccaagtactatcgatccctgtgcccaggtgaatgggttgatcgctggaacga 543 Query: 508 gcaacgggaaaacggcaccttccctggacctctgtaa 544 |||||| |||||||||||||||||||||||||||||| Sbjct: 544 gcaacgcgaaaacggcaccttccctggacctctgtaa 580 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 42 ccatggccgccgaagccaaggccccgtccctcgcagaggaatattcacttccaccacaag 101 |||||||||| |||| |||| | ||||||||||| ||||| ||||||||||||||||| | Sbjct: 60 ccatggccgcggaaggcaagacgccgtccctcgccgaggagtattcacttccaccacagg 119 Query: 102 aggctccagtggaaaaagcagccgaggaaaaacctgctattggcactgagactgaagctg 161 | | |||||||||||| ||||| ||||| || || ||| ||| |||||| |||| |||| Sbjct: 120 aagttccagtggaaaaggcagctgaggagaagccctctagtggtactgagtctgaggctg 179 Query: 162 cccctgcaacaaatgatgaaac 183 | || |||| ||||||||||| Sbjct: 180 ctccctcaaccaatgatgaaac 201