BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023c09 (1070 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001061768.1| Oryza sativa (japonica cultivar-group) Os05g... 200 8e-48 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 200 8e-48 gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome... 200 8e-48 ref|NM_001048651.1| Oryza sativa (japonica cultivar-group) Os01g... 145 4e-31 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 145 4e-31 >ref|NM_001061768.1| Oryza sativa (japonica cultivar-group) Os05g0335500 (Os05g0335500) mRNA, complete cds Length = 681 Score = 200 bits (101), Expect = 8e-48 Identities = 145/159 (91%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 268 cggacgcctccatctccaacccctccttccgcgtctactacggcgtcgcctctgccggct 327 |||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 110 cggacgccgccgtctccaacccttccttccgcgtctactacggcgtcgcctccgccggct 169 Query: 328 ccgtgccgttcctctgggagtcggcgccgggcacgcccaaga---acgccatctccgaca 384 | ||||||||||||||||||||||||||||| |||||||||| ||||||||| || | Sbjct: 170 cggtgccgttcctctgggagtcggcgccggggacgcccaagaacgacgccatcttcgccg 229 Query: 385 ccgccctcccgccgctcacgctgccgccgtcctactaca 423 ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 230 ccgccctgccgccgctcacgccgccgccgtcctactaca 268 Score = 101 bits (51), Expect = 6e-18 Identities = 113/134 (84%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 578 gaggaagagcctggtggcgatcccgcggtcgtcgttctcgtcgacgtcaaggggggagga 637 ||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| || || Sbjct: 492 gaggaagaggctggtggcgagcccgcggtcgtcgttctcgtccacgtcgaggggcgacga 551 Query: 638 cgaagacggggatggtggggtggcgtcaccgacgtcgacgctgtgcttccgggcgcggca 697 ||| ||||| || ||| || || |||||||| ||||||||||||||| ||||||| Sbjct: 552 cgacgacggcga------ggtcgcctcgccgacgtccacgctgtgcttccggacgcggca 605 Query: 698 gtccggcgggggcg 711 |||||||| |||| Sbjct: 606 ctccggcggcggcg 619 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 486 gccagcttcgtccacagcatcctccccaagttccgcaggagccacaccatgccgtcccc 544 ||||||||||||||||||||| |||||||| | ||| |||||||||||||||||||||| Sbjct: 364 gccagcttcgtccacagcatcatccccaagcttcgccggagccacaccatgccgtcccc 422 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 200 bits (101), Expect = 8e-48 Identities = 145/159 (91%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 268 cggacgcctccatctccaacccctccttccgcgtctactacggcgtcgcctctgccggct 327 |||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 15560536 cggacgccgccgtctccaacccttccttccgcgtctactacggcgtcgcctccgccggct 15560595 Query: 328 ccgtgccgttcctctgggagtcggcgccgggcacgcccaaga---acgccatctccgaca 384 | ||||||||||||||||||||||||||||| |||||||||| ||||||||| || | Sbjct: 15560596 cggtgccgttcctctgggagtcggcgccggggacgcccaagaacgacgccatcttcgccg 15560655 Query: 385 ccgccctcccgccgctcacgctgccgccgtcctactaca 423 ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 15560656 ccgccctgccgccgctcacgccgccgccgtcctactaca 15560694 Score = 101 bits (51), Expect = 6e-18 Identities = 113/134 (84%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 578 gaggaagagcctggtggcgatcccgcggtcgtcgttctcgtcgacgtcaaggggggagga 637 ||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| || || Sbjct: 15560918 gaggaagaggctggtggcgagcccgcggtcgtcgttctcgtccacgtcgaggggcgacga 15560977 Query: 638 cgaagacggggatggtggggtggcgtcaccgacgtcgacgctgtgcttccgggcgcggca 697 ||| ||||| || ||| || || |||||||| ||||||||||||||| ||||||| Sbjct: 15560978 cgacgacggcga------ggtcgcctcgccgacgtccacgctgtgcttccggacgcggca 15561031 Query: 698 gtccggcgggggcg 711 |||||||| |||| Sbjct: 15561032 ctccggcggcggcg 15561045 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 486 gccagcttcgtccacagcatcctccccaagttccgcaggagccacaccatgccgtcccc 544 ||||||||||||||||||||| |||||||| | ||| |||||||||||||||||||||| Sbjct: 15560790 gccagcttcgtccacagcatcatccccaagcttcgccggagccacaccatgccgtcccc 15560848 >gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 200 bits (101), Expect = 8e-48 Identities = 145/159 (91%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 268 cggacgcctccatctccaacccctccttccgcgtctactacggcgtcgcctctgccggct 327 |||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 90026 cggacgccgccgtctccaacccttccttccgcgtctactacggcgtcgcctccgccggct 90085 Query: 328 ccgtgccgttcctctgggagtcggcgccgggcacgcccaaga---acgccatctccgaca 384 | ||||||||||||||||||||||||||||| |||||||||| ||||||||| || | Sbjct: 90086 cggtgccgttcctctgggagtcggcgccggggacgcccaagaacgacgccatcttcgccg 90145 Query: 385 ccgccctcccgccgctcacgctgccgccgtcctactaca 423 ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 90146 ccgccctgccgccgctcacgccgccgccgtcctactaca 90184 Score = 101 bits (51), Expect = 6e-18 Identities = 113/134 (84%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 578 gaggaagagcctggtggcgatcccgcggtcgtcgttctcgtcgacgtcaaggggggagga 637 ||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| || || Sbjct: 90408 gaggaagaggctggtggcgagcccgcggtcgtcgttctcgtccacgtcgaggggcgacga 90467 Query: 638 cgaagacggggatggtggggtggcgtcaccgacgtcgacgctgtgcttccgggcgcggca 697 ||| ||||| || ||| || || |||||||| ||||||||||||||| ||||||| Sbjct: 90468 cgacgacggcga------ggtcgcctcgccgacgtccacgctgtgcttccggacgcggca 90521 Query: 698 gtccggcgggggcg 711 |||||||| |||| Sbjct: 90522 ctccggcggcggcg 90535 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 486 gccagcttcgtccacagcatcctccccaagttccgcaggagccacaccatgccgtcccc 544 ||||||||||||||||||||| |||||||| | ||| |||||||||||||||||||||| Sbjct: 90280 gccagcttcgtccacagcatcatccccaagcttcgccggagccacaccatgccgtcccc 90338 >ref|NM_001048651.1| Oryza sativa (japonica cultivar-group) Os01g0166500 (Os01g0166500) mRNA, complete cds Length = 1078 Score = 145 bits (73), Expect = 4e-31 Identities = 109/121 (90%) Strand = Plus / Plus Query: 303 tactacggcgtcgcctctgccggctccgtgccgttcctctgggagtcggcgccgggcacg 362 ||||||||||||||||| || ||||||||||| ||||| ||||||||| |||||||||| Sbjct: 209 tactacggcgtcgcctccgcgggctccgtgcccttcctgtgggagtcgcagccgggcacg 268 Query: 363 cccaagaacgccatctccgacaccgccctcccgccgctcacgctgccgccgtcctactac 422 |||||||||||||| |||||| ||| || ||||||||||||| |||||||||||||||| Sbjct: 269 cccaagaacgccatgtccgacgccgtgctgccgccgctcacgccgccgccgtcctactac 328 Query: 423 a 423 | Sbjct: 329 a 329 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 145 bits (73), Expect = 4e-31 Identities = 109/121 (90%) Strand = Plus / Minus Query: 303 tactacggcgtcgcctctgccggctccgtgccgttcctctgggagtcggcgccgggcacg 362 ||||||||||||||||| || ||||||||||| ||||| ||||||||| |||||||||| Sbjct: 3414735 tactacggcgtcgcctccgcgggctccgtgcccttcctgtgggagtcgcagccgggcacg 3414676 Query: 363 cccaagaacgccatctccgacaccgccctcccgccgctcacgctgccgccgtcctactac 422 |||||||||||||| |||||| ||| || ||||||||||||| |||||||||||||||| Sbjct: 3414675 cccaagaacgccatgtccgacgccgtgctgccgccgctcacgccgccgccgtcctactac 3414616 Query: 423 a 423 | Sbjct: 3414615 a 3414615