BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023c03 (1049 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073359.1| Oryza sativa (japonica cultivar-group) Os12g... 367 6e-98 dbj|AK099309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 6e-98 dbj|AK064923.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 6e-98 gb|AY110622.1| Zea mays CL10007_1 mRNA sequence 230 9e-57 gb|DQ245061.1| Zea mays clone 12539 mRNA sequence 200 8e-48 >ref|NM_001073359.1| Oryza sativa (japonica cultivar-group) Os12g0502200 (Os12g0502200) mRNA, complete cds Length = 1066 Score = 367 bits (185), Expect = 6e-98 Identities = 330/377 (87%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 41 cctcctcagtttggaaga-tggcgttggctaataagcttggtagtctgctcaagaaagcc 99 |||| ||||||||||| | ||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 33 cctcgtcagtttggaacaatggcgttggctaataagattggtaatctgctcaagagagcc 92 Query: 100 acgaactcaaatccaagtctctatcaagcaatcagatgcatgtcatcctcaaagctcttt 159 |||| ||||| |||| |||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 93 acgagctcaagtccagctctctatcaatcaatcagatgcatgtcatcctcaaagcttttt 152 Query: 160 gttggaggcctttcctacggcacagatgatcatggtctcaaagatgcttttgccaattat 219 |||||||||||||| |||||||||||||| || | |||| |||| |||||||||||||| Sbjct: 153 gttggaggcctttcgtacggcacagatgagcagagcctcagagatacttttgccaattat 212 Query: 220 ggacaagtcattgaagctaggattatccaagaccgtgagtctgggaggtctagaggtttt 279 || ||||| |||||||||| ||| ||| | |||||||| |||||||||||||||||||| Sbjct: 213 ggtcaagttattgaagctaagatcatcaatgaccgtgaaactgggaggtctagaggtttt 272 Query: 280 ggcttcgtaacttacacatcaagtgaagaggctgcagctgccatcacagccttggatgga 339 |||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 273 ggcttcataacttacgcatcaagtgaagaggcttcagctgcaatcacagccttggatgga 332 Query: 340 caggatcttcacgggcggaacatacgggttaactatgccaccgagaggacaagtggcttc 399 ||||||| | ||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 333 aaggatctcgatgggcgtaacatcagggttaacactgccaatgagagaactggtggcttc 392 Query: 400 cgtagtgttggtggtgg 416 ||||||| |||||||| Sbjct: 393 cgtagtgggggtggtgg 409 Score = 91.7 bits (46), Expect = 5e-15 Identities = 137/166 (82%), Gaps = 6/166 (3%) Strand = Plus / Plus Query: 641 gtttcggtggaaaccctgctggaaactttggtgctgctggtggaggttccaccggcggtg 700 |||| ||||||||||| ||||||| |||||||| |||||| ||||||||| ||||||| Sbjct: 658 gttttggtggaaacccagctggaagctttggtgatgctgg---aggttccactggcggtg 714 Query: 701 atgacttctctagcggtgcccctggagacaatgttgaaagcggcaagaatgacgatctca 760 ||| ||||| ||||||| ||| |||| ||| |||| ||||||| || || |||| Sbjct: 715 gtgatttctc---cggtgccggtggtgacagctttggaagccgcaagaacgatgagctca 771 Query: 761 tggatgacctcctcaaggacgatgagcccgacaactacgccaacaa 806 ||||||||||| ||||||| || ||||| |||||||| |||||||| Sbjct: 772 tggatgacctcttcaaggatgacgagcctgacaactatgccaacaa 817 >dbj|AK099309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146P18, full insert sequence Length = 1027 Score = 367 bits (185), Expect = 6e-98 Identities = 330/377 (87%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 41 cctcctcagtttggaaga-tggcgttggctaataagcttggtagtctgctcaagaaagcc 99 |||| ||||||||||| | ||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 27 cctcgtcagtttggaacaatggcgttggctaataagattggtaatctgctcaagagagcc 86 Query: 100 acgaactcaaatccaagtctctatcaagcaatcagatgcatgtcatcctcaaagctcttt 159 |||| ||||| |||| |||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 87 acgagctcaagtccagctctctatcaatcaatcagatgcatgtcatcctcaaagcttttt 146 Query: 160 gttggaggcctttcctacggcacagatgatcatggtctcaaagatgcttttgccaattat 219 |||||||||||||| |||||||||||||| || | |||| |||| |||||||||||||| Sbjct: 147 gttggaggcctttcgtacggcacagatgagcagagcctcagagatacttttgccaattat 206 Query: 220 ggacaagtcattgaagctaggattatccaagaccgtgagtctgggaggtctagaggtttt 279 || ||||| |||||||||| ||| ||| | |||||||| |||||||||||||||||||| Sbjct: 207 ggtcaagttattgaagctaagatcatcaatgaccgtgaaactgggaggtctagaggtttt 266 Query: 280 ggcttcgtaacttacacatcaagtgaagaggctgcagctgccatcacagccttggatgga 339 |||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 267 ggcttcataacttacgcatcaagtgaagaggcttcagctgcaatcacagccttggatgga 326 Query: 340 caggatcttcacgggcggaacatacgggttaactatgccaccgagaggacaagtggcttc 399 ||||||| | ||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 327 aaggatctcgatgggcgtaacatcagggttaacactgccaatgagagaactggtggcttc 386 Query: 400 cgtagtgttggtggtgg 416 ||||||| |||||||| Sbjct: 387 cgtagtgggggtggtgg 403 Score = 91.7 bits (46), Expect = 5e-15 Identities = 137/166 (82%), Gaps = 6/166 (3%) Strand = Plus / Plus Query: 641 gtttcggtggaaaccctgctggaaactttggtgctgctggtggaggttccaccggcggtg 700 |||| ||||||||||| ||||||| |||||||| |||||| ||||||||| ||||||| Sbjct: 652 gttttggtggaaacccagctggaagctttggtgatgctgg---aggttccactggcggtg 708 Query: 701 atgacttctctagcggtgcccctggagacaatgttgaaagcggcaagaatgacgatctca 760 ||| ||||| ||||||| ||| |||| ||| |||| ||||||| || || |||| Sbjct: 709 gtgatttctc---cggtgccggtggtgacagctttggaagccgcaagaacgatgagctca 765 Query: 761 tggatgacctcctcaaggacgatgagcccgacaactacgccaacaa 806 ||||||||||| ||||||| || ||||| |||||||| |||||||| Sbjct: 766 tggatgacctcttcaaggatgacgagcctgacaactatgccaacaa 811 >dbj|AK064923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N14, full insert sequence Length = 1069 Score = 367 bits (185), Expect = 6e-98 Identities = 330/377 (87%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 41 cctcctcagtttggaaga-tggcgttggctaataagcttggtagtctgctcaagaaagcc 99 |||| ||||||||||| | ||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 36 cctcgtcagtttggaacaatggcgttggctaataagattggtaatctgctcaagagagcc 95 Query: 100 acgaactcaaatccaagtctctatcaagcaatcagatgcatgtcatcctcaaagctcttt 159 |||| ||||| |||| |||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 96 acgagctcaagtccagctctctatcaatcaatcagatgcatgtcatcctcaaagcttttt 155 Query: 160 gttggaggcctttcctacggcacagatgatcatggtctcaaagatgcttttgccaattat 219 |||||||||||||| |||||||||||||| || | |||| |||| |||||||||||||| Sbjct: 156 gttggaggcctttcgtacggcacagatgagcagagcctcagagatacttttgccaattat 215 Query: 220 ggacaagtcattgaagctaggattatccaagaccgtgagtctgggaggtctagaggtttt 279 || ||||| |||||||||| ||| ||| | |||||||| |||||||||||||||||||| Sbjct: 216 ggtcaagttattgaagctaagatcatcaatgaccgtgaaactgggaggtctagaggtttt 275 Query: 280 ggcttcgtaacttacacatcaagtgaagaggctgcagctgccatcacagccttggatgga 339 |||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 276 ggcttcataacttacgcatcaagtgaagaggcttcagctgcaatcacagccttggatgga 335 Query: 340 caggatcttcacgggcggaacatacgggttaactatgccaccgagaggacaagtggcttc 399 ||||||| | ||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 336 aaggatctcgatgggcgtaacatcagggttaacactgccaatgagagaactggtggcttc 395 Query: 400 cgtagtgttggtggtgg 416 ||||||| |||||||| Sbjct: 396 cgtagtgggggtggtgg 412 Score = 91.7 bits (46), Expect = 5e-15 Identities = 137/166 (82%), Gaps = 6/166 (3%) Strand = Plus / Plus Query: 641 gtttcggtggaaaccctgctggaaactttggtgctgctggtggaggttccaccggcggtg 700 |||| ||||||||||| ||||||| |||||||| |||||| ||||||||| ||||||| Sbjct: 661 gttttggtggaaacccagctggaagctttggtgatgctgg---aggttccactggcggtg 717 Query: 701 atgacttctctagcggtgcccctggagacaatgttgaaagcggcaagaatgacgatctca 760 ||| ||||| ||||||| ||| |||| ||| |||| ||||||| || || |||| Sbjct: 718 gtgatttctc---cggtgccggtggtgacagctttggaagccgcaagaacgatgagctca 774 Query: 761 tggatgacctcctcaaggacgatgagcccgacaactacgccaacaa 806 ||||||||||| ||||||| || ||||| |||||||| |||||||| Sbjct: 775 tggatgacctcttcaaggatgacgagcctgacaactatgccaacaa 820 >gb|AY110622.1| Zea mays CL10007_1 mRNA sequence Length = 1153 Score = 230 bits (116), Expect = 9e-57 Identities = 286/341 (83%), Gaps = 5/341 (1%) Strand = Plus / Plus Query: 67 gctaataagcttggtagtctgctcaagaaagccacgaactcaaatccaa---gtct--ct 121 ||||||||||||||| ||||||||||||| || |||| ||||| | || |||| || Sbjct: 63 gctaataagcttggtggtctgctcaagaatgctacgagttcaaagcaaatatgtctgtct 122 Query: 122 atcaagcaatcagatgcatgtcatcctcaaagctctttgttggaggcctttcctacggca 181 | ||||||||||||||||||||||| || ||||||||||||||||| |||| || || | Sbjct: 123 accaagcaatcagatgcatgtcatcatccaagctctttgttggagggatttcttatggaa 182 Query: 182 cagatgatcatggtctcaaagatgcttttgccaattatggacaagtcattgaagctagga 241 | |||||||| |||||| ||| | |||||||| ||||| |||||||||||||||| || Sbjct: 183 ctgatgatcacagtctcagagacgagtttgccaaatatgggcaagtcattgaagctaaga 242 Query: 242 ttatccaagaccgtgagtctgggaggtctagaggttttggcttcgtaacttacacatcaa 301 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 243 ttatccttgaccgtgagtctgggaggtctagaggttttggctttgtaacttacacgtctt 302 Query: 302 gtgaagaggctgcagctgccatcacagccttggatggacaggatcttcacgggcggaaca 361 ||| ||||||||||||||||| || |||||||||||| || ||| | || |||| || Sbjct: 303 ctgaggaggctgcagctgccattactgccttggatggaaagactctcgatggacggagca 362 Query: 362 tacgggttaactatgccaccgagaggacaagtggcttccgt 402 ||||| |||| |||| | ||||| |||| ||||||||||| Sbjct: 363 tacggattaatcatgctaacgagaagacaggtggcttccgt 403 >gb|DQ245061.1| Zea mays clone 12539 mRNA sequence Length = 1036 Score = 200 bits (101), Expect = 8e-48 Identities = 232/275 (84%), Gaps = 3/275 (1%) Strand = Plus / Plus Query: 65 tggctaataagcttggtagtctgctcaagaaagccacgaactcaaatccaagtctctatc 124 ||||||||||||||||| ||||||||||||||||||| | ||||||| | |||| | Sbjct: 83 tggctaataagcttggtggtctgctcaagaaagccacaagttcaaatctgtctgtctacc 142 Query: 125 aagcaatcagatgcatgtcatcctcaaagctctttgttggaggcctttcctacggcacag 184 ||||||||||||||||||||||| ||||||||||||||||| |||| || || | Sbjct: 143 aagcaatcagatgcatgtcatcc---aagctctttgttggagggatttcttatcaaactg 199 Query: 185 atgatcatggtctcaaagatgcttttgccaattatggacaagtcattgaagctaggatta 244 ||||||| |||||| || | |||||||| ||||| |||||||||||||||||||||| Sbjct: 200 atgatcacagtctcagggacgagtttgccaaatatgggcaagtcattgaagctaggatta 259 Query: 245 tccaagaccgtgagtctgggaggtctagaggttttggcttcgtaacttacacatcaagtg 304 || |||||||| |||||||||||||||||||||||||| ||||||||||| || || Sbjct: 260 tcattgaccgtgaatctgggaggtctagaggttttggctttgtaacttacacgtcttctg 319 Query: 305 aagaggctgcagctgccatcacagccttggatgga 339 | |||||| |||||||||| || |||||||||||| Sbjct: 320 aggaggcttcagctgccattactgccttggatgga 354