BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023b18 (971 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051715.1| Oryza sativa (japonica cultivar-group) Os01g... 371 4e-99 dbj|AK063138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 4e-99 emb|CT829880.1| Oryza sativa (indica cultivar-group) cDNA clone:... 357 5e-95 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 242 2e-60 dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D... 242 2e-60 >ref|NM_001051715.1| Oryza sativa (japonica cultivar-group) Os01g0914400 (Os01g0914400) mRNA, complete cds Length = 699 Score = 371 bits (187), Expect = 4e-99 Identities = 389/455 (85%), Gaps = 11/455 (2%) Strand = Plus / Plus Query: 84 atccaagcataccaccatcctcccgttcccaatccatttgcccatttgaagaagggttat 143 ||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||||||| Sbjct: 13 atccaggcacaccaccatcctcccattctctatccatttg----tttgaagaagggttat 68 Query: 144 ggccaatggttgccccacaactaccccaaactccctgctcctcttcttcctcctctcttg 203 |||||||| |||||||||| ||||| ||| |||| ||| ||||||||||||| ||| || Sbjct: 69 ggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgttt 128 Query: 204 cctgcttatcggtcatgctctttgcaaccaagctcaccatggtagcatctcagat----- 258 |||||| || ||||||||| |||||| |||| |||||||| |||||||||| | Sbjct: 129 cctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggtacaga 188 Query: 259 -tatggagaacaatatcccggccaacgactacctggagaacataaagatttgcaagagaa 317 ||||||||||||||||| |||| | |||||| |||||||| | ||||||| ||||| Sbjct: 189 ctatggagaacaatatcctcaccaaacattacctgaagaacatatacatttgcaggagaa 248 Query: 318 cgtgaagggtctaaacaaggagaaactgcccaatcacgcaaggagaatgctgattggttc 377 | | |||| |||||||||||||| |||||||| | |||||||||||| |||||||||| Sbjct: 249 catcaaggttctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttc 308 Query: 378 gaccgctccaatatgtacgtacaacgagtgcagggggtgtcgattcaggtgtactgctga 437 ||| ||||||||||| || |||||||||||||| ||||||||||||| ||||||||| || Sbjct: 309 gactgctccaatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccga 368 Query: 438 gcaagtcccggtggatgcaaatgaccccatgaatagtgcctaccattacaagtgtgtttg 497 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 369 gcaggtcccagtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttg 428 Query: 498 ccacaggtgat-tttaataattaggaggagcttct 531 ||||||||||| |||||||||| ||||||||||| Sbjct: 429 ccacaggtgatcattaataattaagaggagcttct 463 >dbj|AK063138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-G05, full insert sequence Length = 699 Score = 371 bits (187), Expect = 4e-99 Identities = 389/455 (85%), Gaps = 11/455 (2%) Strand = Plus / Plus Query: 84 atccaagcataccaccatcctcccgttcccaatccatttgcccatttgaagaagggttat 143 ||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||||||| Sbjct: 13 atccaggcacaccaccatcctcccattctctatccatttg----tttgaagaagggttat 68 Query: 144 ggccaatggttgccccacaactaccccaaactccctgctcctcttcttcctcctctcttg 203 |||||||| |||||||||| ||||| ||| |||| ||| ||||||||||||| ||| || Sbjct: 69 ggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgttt 128 Query: 204 cctgcttatcggtcatgctctttgcaaccaagctcaccatggtagcatctcagat----- 258 |||||| || ||||||||| |||||| |||| |||||||| |||||||||| | Sbjct: 129 cctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcaggtacaga 188 Query: 259 -tatggagaacaatatcccggccaacgactacctggagaacataaagatttgcaagagaa 317 ||||||||||||||||| |||| | |||||| |||||||| | ||||||| ||||| Sbjct: 189 ctatggagaacaatatcctcaccaaacattacctgaagaacatatacatttgcaggagaa 248 Query: 318 cgtgaagggtctaaacaaggagaaactgcccaatcacgcaaggagaatgctgattggttc 377 | | |||| |||||||||||||| |||||||| | |||||||||||| |||||||||| Sbjct: 249 catcaaggttctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttc 308 Query: 378 gaccgctccaatatgtacgtacaacgagtgcagggggtgtcgattcaggtgtactgctga 437 ||| ||||||||||| || |||||||||||||| ||||||||||||| ||||||||| || Sbjct: 309 gactgctccaatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccga 368 Query: 438 gcaagtcccggtggatgcaaatgaccccatgaatagtgcctaccattacaagtgtgtttg 497 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 369 gcaggtcccagtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttg 428 Query: 498 ccacaggtgat-tttaataattaggaggagcttct 531 ||||||||||| |||||||||| ||||||||||| Sbjct: 429 ccacaggtgatcattaataattaagaggagcttct 463 >emb|CT829880.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA033C19, full insert sequence Length = 610 Score = 357 bits (180), Expect = 5e-95 Identities = 354/411 (86%), Gaps = 7/411 (1%) Strand = Plus / Plus Query: 128 tttgaagaagggttatggccaatggttgccccacaactaccccaaactccctgctcctct 187 |||||||||||||||||||||||| |||||||||| ||||| ||| |||| ||| ||||| Sbjct: 11 tttgaagaagggttatggccaatgcttgccccacatctaccacaagctccttgcccctct 70 Query: 188 tcttcctcctctcttgcctgcttatcggtcatgctctttgcaaccaagctcaccatggta 247 |||||||| ||| || |||||| || ||||||||| |||||| |||| |||||||| | Sbjct: 71 tcttcctcttctgtttcctgctcttcagtcatgctcgttgcaatcaagggcaccatggca 130 Query: 248 gcatctcagat------tatggagaacaatatcccggccaacgactacctggagaacata 301 ||||||||| | ||||||||||||||||| |||| | |||||| |||||||| Sbjct: 131 gcatctcaggtacagactatggagaacaatatcctcaccaaacattacctgaagaacata 190 Query: 302 aagatttgcaagagaacgtgaagggtctaaacaaggagaaactgcccaatcacgcaagga 361 | ||||||| |||||| | |||| |||||||||||||| |||||||| | ||||||| Sbjct: 191 tacatttgcaggagaacatcaaggttctaaacaaggagaggctgcccaaatatgcaagga 250 Query: 362 gaatgctgattggttcgaccgctccaatatgtacgtacaacgagtgcagggggtgtcgat 421 ||||| ||||||||||||| ||||||||||| || |||||||||||||| |||||||||| Sbjct: 251 gaatgttgattggttcgactgctccaatatgcacatacaacgagtgcagagggtgtcgat 310 Query: 422 tcaggtgtactgctgagcaagtcccggtggatgcaaatgaccccatgaatagtgcctacc 481 ||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 311 tcaagtgtactgccgagcaggtcccagtggatgcaaatgaccccatgaatagtgcttacc 370 Query: 482 attacaagtgtgtttgccacaggtgat-tttaataattaggaggagcttct 531 | ||||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 371 actacaaatgtgtttgccacaggtgatcattaataattaagaggagcttct 421 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 242 bits (122), Expect = 2e-60 Identities = 186/206 (90%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 327 tctaaacaaggagaaactgcccaatcacgcaaggagaatgctgattggttcgaccgctcc 386 |||||||||||||| |||||||| | |||||||||||| ||||||||||||| ||||| Sbjct: 39839445 tctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttcgactgctcc 39839504 Query: 387 aatatgtacgtacaacgagtgcagggggtgtcgattcaggtgtactgctgagcaagtccc 446 |||||| || |||||||||||||| ||||||||||||| ||||||||| ||||| ||||| Sbjct: 39839505 aatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccgagcaggtccc 39839564 Query: 447 ggtggatgcaaatgaccccatgaatagtgcctaccattacaagtgtgtttgccacaggtg 506 ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 39839565 agtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttgccacaggtg 39839624 Query: 507 at-tttaataattaggaggagcttct 531 || |||||||||| ||||||||||| Sbjct: 39839625 atcattaataattaagaggagcttct 39839650 Score = 135 bits (68), Expect = 4e-28 Identities = 147/173 (84%), Gaps = 4/173 (2%) Strand = Plus / Plus Query: 84 atccaagcataccaccatcctcccgttcccaatccatttgcccatttgaagaagggttat 143 ||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||||||| Sbjct: 39838662 atccaggcacaccaccatcctcccattctctatccatttg----tttgaagaagggttat 39838717 Query: 144 ggccaatggttgccccacaactaccccaaactccctgctcctcttcttcctcctctcttg 203 |||||||| |||||||||| ||||| ||| |||| ||| ||||||||||||| ||| || Sbjct: 39838718 ggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgttt 39838777 Query: 204 cctgcttatcggtcatgctctttgcaaccaagctcaccatggtagcatctcag 256 |||||| || ||||||||| |||||| |||| |||||||| |||||||||| Sbjct: 39838778 cctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcag 39838830 >dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 242 bits (122), Expect = 2e-60 Identities = 186/206 (90%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 327 tctaaacaaggagaaactgcccaatcacgcaaggagaatgctgattggttcgaccgctcc 386 |||||||||||||| |||||||| | |||||||||||| ||||||||||||| ||||| Sbjct: 20153 tctaaacaaggagaggctgcccaaatatgcaaggagaatgttgattggttcgactgctcc 20212 Query: 387 aatatgtacgtacaacgagtgcagggggtgtcgattcaggtgtactgctgagcaagtccc 446 |||||| || |||||||||||||| ||||||||||||| ||||||||| ||||| ||||| Sbjct: 20213 aatatgcacatacaacgagtgcagagggtgtcgattcaagtgtactgccgagcaggtccc 20272 Query: 447 ggtggatgcaaatgaccccatgaatagtgcctaccattacaagtgtgtttgccacaggtg 506 ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 20273 agtggatgcaaatgaccccatgaatagtgcttaccactacaaatgtgtttgccacaggtg 20332 Query: 507 at-tttaataattaggaggagcttct 531 || |||||||||| ||||||||||| Sbjct: 20333 atcattaataattaagaggagcttct 20358 Score = 135 bits (68), Expect = 4e-28 Identities = 147/173 (84%), Gaps = 4/173 (2%) Strand = Plus / Plus Query: 84 atccaagcataccaccatcctcccgttcccaatccatttgcccatttgaagaagggttat 143 ||||| ||| |||||||||||||| ||| | ||||||||| |||||||||||||||| Sbjct: 19370 atccaggcacaccaccatcctcccattctctatccatttg----tttgaagaagggttat 19425 Query: 144 ggccaatggttgccccacaactaccccaaactccctgctcctcttcttcctcctctcttg 203 |||||||| |||||||||| ||||| ||| |||| ||| ||||||||||||| ||| || Sbjct: 19426 ggccaatgcttgccccacatctaccacaagctccttgcccctcttcttcctcttctgttt 19485 Query: 204 cctgcttatcggtcatgctctttgcaaccaagctcaccatggtagcatctcag 256 |||||| || ||||||||| |||||| |||| |||||||| |||||||||| Sbjct: 19486 cctgctcttcagtcatgctcgttgcaatcaagggcaccatggcagcatctcag 19538