BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023b09 (1233 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052113.1| Oryza sativa (japonica cultivar-group) Os01g... 264 8e-67 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 264 8e-67 dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic D... 264 8e-67 dbj|AP007260.2| Oryza sativa (japonica cultivar-group) genomic D... 264 8e-67 dbj|AK062411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 8e-67 >ref|NM_001052113.1| Oryza sativa (japonica cultivar-group) Os01g0978400 (Os01g0978400) mRNA, complete cds Length = 1175 Score = 264 bits (133), Expect = 8e-67 Identities = 220/249 (88%) Strand = Plus / Plus Query: 236 cctcctcctccccgccgacctcctggacgcggactccatctccgccgccgcggccgccgg 295 |||||| |||||||||||||| || || |||| | |||||||||| || ||||| || || Sbjct: 209 cctcctgctccccgccgacctgcttgatgcgggcgccatctccgcggcggcggcagcggg 268 Query: 296 cgggggctgccgcgccggcgtgctgcacgtggcgtcgccctgcacgctggccgacccgca 355 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||||||| Sbjct: 269 cgggggctgccgggcgggcgtgctgcacgtggcctccccgtgcacgctggctgacccgcg 328 Query: 356 ggacccgcaggcggagctggtggagccggcggtgcggggcacgctgcacgtcctggaggc 415 ||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 329 ggatccgcaggccgaactggtggagccggcggtgcggggcacgctgcacgtgctggaggc 388 Query: 416 cgcgcgcgccgtgggggcgcggcgcgtggtggtgacctcgtccatctcggccatggtgcc 475 ||||| | || ||| |||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 389 ggcgcggggcgcgggagcgcggcgcgtggtggtgacgtcctccatctcagccatggtgcc 448 Query: 476 caacccggg 484 ||||||||| Sbjct: 449 caacccggg 457 Score = 155 bits (78), Expect = 5e-34 Identities = 187/222 (84%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 648 ccgtcgacgtgccttggccccctgctgcagcctggcctcaacgctagctccgccgtgctg 707 |||||||| ||||| ||||| || |||||||| ||| ||||| ||||| | ||||||| Sbjct: 615 ccgtcgacatgcctcggcccgctcctgcagcccaccctgaacgccagctctgtcgtgctg 674 Query: 708 cagcgcctcctgcagggctccaaggacgaccagggggactactggctcggggctgtccac 767 ||||||||| |||||||||||| ||||||||||| ||||||||||||||| || |||||| Sbjct: 675 cagcgcctcttgcagggctccacggacgaccaggcggactactggctcggcgccgtccac 734 Query: 768 gttccgcgacgtcgccgccgctcacgtcctcctcctcgaggcggccgcggcgtcggggtg 827 | ||||||||||||||||||| ||| |||| || |||||||| || | | || ||| | Sbjct: 735 g-tccgcgacgtcgccgccgcccacctcctgctgctcgaggctcccaccgtctccgggag 793 Query: 828 gtctctctgcacgaacggcatctatcagttcaaggacttcgc 869 || |||||||| ||||||||||| ||||||| |||||||| Sbjct: 794 gtacctctgcaccaacggcatctaccagttcagcgacttcgc 835 Score = 97.6 bits (49), Expect = 1e-16 Identities = 118/141 (83%) Strand = Plus / Plus Query: 77 ggagcgccgcgttctggtcaccggcggcaacggcttcatcgggtcctgggtcgtgcgcgc 136 |||||| ||||| || || ||||||||||| || |||||||| |||||| ||||||| Sbjct: 62 ggagcggcgcgtgctcgtgaccggcggcaatggtttcatcggatcctggatcgtgcggat 121 Query: 137 cctcctcgcccgcgggtacgccgtcaccgccacctaccagccgggcacccacgccgacca 196 ||| ||||| |||||||||||||| ||||| ||||||||||||||||| |||| | || Sbjct: 122 ccttctcgcacgcgggtacgccgtgaccgcaacctaccagccgggcacggacgctgcgca 181 Query: 197 cctccttgctctcgccgacga 217 |||||| || |||| |||||| Sbjct: 182 cctcctcgccctcgacgacga 202 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 264 bits (133), Expect = 8e-67 Identities = 220/249 (88%) Strand = Plus / Plus Query: 236 cctcctcctccccgccgacctcctggacgcggactccatctccgccgccgcggccgccgg 295 |||||| |||||||||||||| || || |||| | |||||||||| || ||||| || || Sbjct: 43236784 cctcctgctccccgccgacctgcttgatgcgggcgccatctccgcggcggcggcagcggg 43236843 Query: 296 cgggggctgccgcgccggcgtgctgcacgtggcgtcgccctgcacgctggccgacccgca 355 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||||||| Sbjct: 43236844 cgggggctgccgggcgggcgtgctgcacgtggcctccccgtgcacgctggctgacccgcg 43236903 Query: 356 ggacccgcaggcggagctggtggagccggcggtgcggggcacgctgcacgtcctggaggc 415 ||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 43236904 ggatccgcaggccgaactggtggagccggcggtgcggggcacgctgcacgtgctggaggc 43236963 Query: 416 cgcgcgcgccgtgggggcgcggcgcgtggtggtgacctcgtccatctcggccatggtgcc 475 ||||| | || ||| |||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 43236964 ggcgcggggcgcgggagcgcggcgcgtggtggtgacgtcctccatctcagccatggtgcc 43237023 Query: 476 caacccggg 484 ||||||||| Sbjct: 43237024 caacccggg 43237032 Score = 155 bits (78), Expect = 5e-34 Identities = 187/222 (84%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 648 ccgtcgacgtgccttggccccctgctgcagcctggcctcaacgctagctccgccgtgctg 707 |||||||| ||||| ||||| || |||||||| ||| ||||| ||||| | ||||||| Sbjct: 43237190 ccgtcgacatgcctcggcccgctcctgcagcccaccctgaacgccagctctgtcgtgctg 43237249 Query: 708 cagcgcctcctgcagggctccaaggacgaccagggggactactggctcggggctgtccac 767 ||||||||| |||||||||||| ||||||||||| ||||||||||||||| || |||||| Sbjct: 43237250 cagcgcctcttgcagggctccacggacgaccaggcggactactggctcggcgccgtccac 43237309 Query: 768 gttccgcgacgtcgccgccgctcacgtcctcctcctcgaggcggccgcggcgtcggggtg 827 | ||||||||||||||||||| ||| |||| || |||||||| || | | || ||| | Sbjct: 43237310 g-tccgcgacgtcgccgccgcccacctcctgctgctcgaggctcccaccgtctccgggag 43237368 Query: 828 gtctctctgcacgaacggcatctatcagttcaaggacttcgc 869 || |||||||| ||||||||||| ||||||| |||||||| Sbjct: 43237369 gtacctctgcaccaacggcatctaccagttcagcgacttcgc 43237410 Score = 97.6 bits (49), Expect = 1e-16 Identities = 118/141 (83%) Strand = Plus / Plus Query: 77 ggagcgccgcgttctggtcaccggcggcaacggcttcatcgggtcctgggtcgtgcgcgc 136 |||||| ||||| || || ||||||||||| || |||||||| |||||| ||||||| Sbjct: 43236637 ggagcggcgcgtgctcgtgaccggcggcaatggtttcatcggatcctggatcgtgcggat 43236696 Query: 137 cctcctcgcccgcgggtacgccgtcaccgccacctaccagccgggcacccacgccgacca 196 ||| ||||| |||||||||||||| ||||| ||||||||||||||||| |||| | || Sbjct: 43236697 ccttctcgcacgcgggtacgccgtgaccgcaacctaccagccgggcacggacgctgcgca 43236756 Query: 197 cctccttgctctcgccgacga 217 |||||| || |||| |||||| Sbjct: 43236757 cctcctcgccctcgacgacga 43236777 >dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0020E09 Length = 149195 Score = 264 bits (133), Expect = 8e-67 Identities = 220/249 (88%) Strand = Plus / Plus Query: 236 cctcctcctccccgccgacctcctggacgcggactccatctccgccgccgcggccgccgg 295 |||||| |||||||||||||| || || |||| | |||||||||| || ||||| || || Sbjct: 124239 cctcctgctccccgccgacctgcttgatgcgggcgccatctccgcggcggcggcagcggg 124298 Query: 296 cgggggctgccgcgccggcgtgctgcacgtggcgtcgccctgcacgctggccgacccgca 355 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||||||| Sbjct: 124299 cgggggctgccgggcgggcgtgctgcacgtggcctccccgtgcacgctggctgacccgcg 124358 Query: 356 ggacccgcaggcggagctggtggagccggcggtgcggggcacgctgcacgtcctggaggc 415 ||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124359 ggatccgcaggccgaactggtggagccggcggtgcggggcacgctgcacgtgctggaggc 124418 Query: 416 cgcgcgcgccgtgggggcgcggcgcgtggtggtgacctcgtccatctcggccatggtgcc 475 ||||| | || ||| |||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 124419 ggcgcggggcgcgggagcgcggcgcgtggtggtgacgtcctccatctcagccatggtgcc 124478 Query: 476 caacccggg 484 ||||||||| Sbjct: 124479 caacccggg 124487 Score = 155 bits (78), Expect = 5e-34 Identities = 187/222 (84%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 648 ccgtcgacgtgccttggccccctgctgcagcctggcctcaacgctagctccgccgtgctg 707 |||||||| ||||| ||||| || |||||||| ||| ||||| ||||| | ||||||| Sbjct: 124645 ccgtcgacatgcctcggcccgctcctgcagcccaccctgaacgccagctctgtcgtgctg 124704 Query: 708 cagcgcctcctgcagggctccaaggacgaccagggggactactggctcggggctgtccac 767 ||||||||| |||||||||||| ||||||||||| ||||||||||||||| || |||||| Sbjct: 124705 cagcgcctcttgcagggctccacggacgaccaggcggactactggctcggcgccgtccac 124764 Query: 768 gttccgcgacgtcgccgccgctcacgtcctcctcctcgaggcggccgcggcgtcggggtg 827 | ||||||||||||||||||| ||| |||| || |||||||| || | | || ||| | Sbjct: 124765 g-tccgcgacgtcgccgccgcccacctcctgctgctcgaggctcccaccgtctccgggag 124823 Query: 828 gtctctctgcacgaacggcatctatcagttcaaggacttcgc 869 || |||||||| ||||||||||| ||||||| |||||||| Sbjct: 124824 gtacctctgcaccaacggcatctaccagttcagcgacttcgc 124865 Score = 97.6 bits (49), Expect = 1e-16 Identities = 118/141 (83%) Strand = Plus / Plus Query: 77 ggagcgccgcgttctggtcaccggcggcaacggcttcatcgggtcctgggtcgtgcgcgc 136 |||||| ||||| || || ||||||||||| || |||||||| |||||| ||||||| Sbjct: 124092 ggagcggcgcgtgctcgtgaccggcggcaatggtttcatcggatcctggatcgtgcggat 124151 Query: 137 cctcctcgcccgcgggtacgccgtcaccgccacctaccagccgggcacccacgccgacca 196 ||| ||||| |||||||||||||| ||||| ||||||||||||||||| |||| | || Sbjct: 124152 ccttctcgcacgcgggtacgccgtgaccgcaacctaccagccgggcacggacgctgcgca 124211 Query: 197 cctccttgctctcgccgacga 217 |||||| || |||| |||||| Sbjct: 124212 cctcctcgccctcgacgacga 124232 >dbj|AP007260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, fosmid clone: OSJNOa275J08 Length = 36356 Score = 264 bits (133), Expect = 8e-67 Identities = 220/249 (88%) Strand = Plus / Plus Query: 236 cctcctcctccccgccgacctcctggacgcggactccatctccgccgccgcggccgccgg 295 |||||| |||||||||||||| || || |||| | |||||||||| || ||||| || || Sbjct: 10859 cctcctgctccccgccgacctgcttgatgcgggcgccatctccgcggcggcggcagcggg 10918 Query: 296 cgggggctgccgcgccggcgtgctgcacgtggcgtcgccctgcacgctggccgacccgca 355 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||||||| Sbjct: 10919 cgggggctgccgggcgggcgtgctgcacgtggcctccccgtgcacgctggctgacccgcg 10978 Query: 356 ggacccgcaggcggagctggtggagccggcggtgcggggcacgctgcacgtcctggaggc 415 ||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10979 ggatccgcaggccgaactggtggagccggcggtgcggggcacgctgcacgtgctggaggc 11038 Query: 416 cgcgcgcgccgtgggggcgcggcgcgtggtggtgacctcgtccatctcggccatggtgcc 475 ||||| | || ||| |||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 11039 ggcgcggggcgcgggagcgcggcgcgtggtggtgacgtcctccatctcagccatggtgcc 11098 Query: 476 caacccggg 484 ||||||||| Sbjct: 11099 caacccggg 11107 Score = 155 bits (78), Expect = 5e-34 Identities = 187/222 (84%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 648 ccgtcgacgtgccttggccccctgctgcagcctggcctcaacgctagctccgccgtgctg 707 |||||||| ||||| ||||| || |||||||| ||| ||||| ||||| | ||||||| Sbjct: 11265 ccgtcgacatgcctcggcccgctcctgcagcccaccctgaacgccagctctgtcgtgctg 11324 Query: 708 cagcgcctcctgcagggctccaaggacgaccagggggactactggctcggggctgtccac 767 ||||||||| |||||||||||| ||||||||||| ||||||||||||||| || |||||| Sbjct: 11325 cagcgcctcttgcagggctccacggacgaccaggcggactactggctcggcgccgtccac 11384 Query: 768 gttccgcgacgtcgccgccgctcacgtcctcctcctcgaggcggccgcggcgtcggggtg 827 | ||||||||||||||||||| ||| |||| || |||||||| || | | || ||| | Sbjct: 11385 g-tccgcgacgtcgccgccgcccacctcctgctgctcgaggctcccaccgtctccgggag 11443 Query: 828 gtctctctgcacgaacggcatctatcagttcaaggacttcgc 869 || |||||||| ||||||||||| ||||||| |||||||| Sbjct: 11444 gtacctctgcaccaacggcatctaccagttcagcgacttcgc 11485 Score = 97.6 bits (49), Expect = 1e-16 Identities = 118/141 (83%) Strand = Plus / Plus Query: 77 ggagcgccgcgttctggtcaccggcggcaacggcttcatcgggtcctgggtcgtgcgcgc 136 |||||| ||||| || || ||||||||||| || |||||||| |||||| ||||||| Sbjct: 10712 ggagcggcgcgtgctcgtgaccggcggcaatggtttcatcggatcctggatcgtgcggat 10771 Query: 137 cctcctcgcccgcgggtacgccgtcaccgccacctaccagccgggcacccacgccgacca 196 ||| ||||| |||||||||||||| ||||| ||||||||||||||||| |||| | || Sbjct: 10772 ccttctcgcacgcgggtacgccgtgaccgcaacctaccagccgggcacggacgctgcgca 10831 Query: 197 cctccttgctctcgccgacga 217 |||||| || |||| |||||| Sbjct: 10832 cctcctcgccctcgacgacga 10852 >dbj|AK062411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F01, full insert sequence Length = 1175 Score = 264 bits (133), Expect = 8e-67 Identities = 220/249 (88%) Strand = Plus / Plus Query: 236 cctcctcctccccgccgacctcctggacgcggactccatctccgccgccgcggccgccgg 295 |||||| |||||||||||||| || || |||| | |||||||||| || ||||| || || Sbjct: 209 cctcctgctccccgccgacctgcttgatgcgggcgccatctccgcggcggcggcagcggg 268 Query: 296 cgggggctgccgcgccggcgtgctgcacgtggcgtcgccctgcacgctggccgacccgca 355 |||||||||||| || ||||||||||||||||| || || ||||||||||| ||||||| Sbjct: 269 cgggggctgccgggcgggcgtgctgcacgtggcctccccgtgcacgctggctgacccgcg 328 Query: 356 ggacccgcaggcggagctggtggagccggcggtgcggggcacgctgcacgtcctggaggc 415 ||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 329 ggatccgcaggccgaactggtggagccggcggtgcggggcacgctgcacgtgctggaggc 388 Query: 416 cgcgcgcgccgtgggggcgcggcgcgtggtggtgacctcgtccatctcggccatggtgcc 475 ||||| | || ||| |||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 389 ggcgcggggcgcgggagcgcggcgcgtggtggtgacgtcctccatctcagccatggtgcc 448 Query: 476 caacccggg 484 ||||||||| Sbjct: 449 caacccggg 457 Score = 147 bits (74), Expect = 1e-31 Identities = 186/222 (83%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 648 ccgtcgacgtgccttggccccctgctgcagcctggcctcaacgctagctccgccgtgctg 707 |||||||| ||||| ||||| || ||| |||| ||| ||||| ||||| | ||||||| Sbjct: 615 ccgtcgacatgcctcggcccgctcctgtagcccaccctgaacgccagctctgtcgtgctg 674 Query: 708 cagcgcctcctgcagggctccaaggacgaccagggggactactggctcggggctgtccac 767 ||||||||| |||||||||||| ||||||||||| ||||||||||||||| || |||||| Sbjct: 675 cagcgcctcttgcagggctccacggacgaccaggcggactactggctcggcgccgtccac 734 Query: 768 gttccgcgacgtcgccgccgctcacgtcctcctcctcgaggcggccgcggcgtcggggtg 827 | ||||||||||||||||||| ||| |||| || |||||||| || | | || ||| | Sbjct: 735 g-tccgcgacgtcgccgccgcccacctcctgctgctcgaggctcccaccgtctccgggag 793 Query: 828 gtctctctgcacgaacggcatctatcagttcaaggacttcgc 869 || |||||||| ||||||||||| ||||||| |||||||| Sbjct: 794 gtacctctgcaccaacggcatctaccagttcagcgacttcgc 835 Score = 97.6 bits (49), Expect = 1e-16 Identities = 118/141 (83%) Strand = Plus / Plus Query: 77 ggagcgccgcgttctggtcaccggcggcaacggcttcatcgggtcctgggtcgtgcgcgc 136 |||||| ||||| || || ||||||||||| || |||||||| |||||| ||||||| Sbjct: 62 ggagcggcgcgtgctcgtgaccggcggcaatggtttcatcggatcctggatcgtgcggat 121 Query: 137 cctcctcgcccgcgggtacgccgtcaccgccacctaccagccgggcacccacgccgacca 196 ||| ||||| |||||||||||||| ||||| ||||||||||||||||| |||| | || Sbjct: 122 ccttctcgcacgcgggtacgccgtgaccgcaacctaccagccgggcacggacgctgcgca 181 Query: 197 cctccttgctctcgccgacga 217 |||||| || |||| |||||| Sbjct: 182 cctcctcgccctcgacgacga 202