BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023a09 (869 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060599.1| Oryza sativa (japonica cultivar-group) Os04g... 246 1e-61 emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 246 1e-61 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 246 1e-61 emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4,... 246 1e-61 dbj|AK067139.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 1e-61 >ref|NM_001060599.1| Oryza sativa (japonica cultivar-group) Os04g0645200 (Os04g0645200) mRNA, complete cds Length = 884 Score = 246 bits (124), Expect = 1e-61 Identities = 184/203 (90%), Gaps = 12/203 (5%) Strand = Plus / Plus Query: 389 tcgctgtcgccgtcgccgccc---tcgtcgtcgtcgtgcggggtg---gtgataagcaag 442 |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 539 tcgctgtcgccgtcgccgccggcgtcgtcgtcgtcgtgcggggtggtggtgataaccaag 598 Query: 443 gaggaagaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 502 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 gaggaggaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 658 Query: 503 ccgaggagcgg------cggcgacggcgagaggccgaagctgctgccgttgttccccgtc 556 ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 659 ccgaggagcggcggcgccggcgacggcgagaggcccaagctgctgccgctgttccccgtc 718 Query: 557 tactcccctaggagctcctcctt 579 ||||||| |||||||||||||| Sbjct: 719 cactcccccaggagctcctcctt 741 Score = 127 bits (64), Expect = 8e-26 Identities = 73/76 (96%) Strand = Plus / Plus Query: 159 tggagacgaacacgacgttcgtgcaggccgacccgacgacgttccgcgcgctcgtgcaga 218 |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 231 tggacacgaacacgacgttcgtgcaggccgacccggcgacgttccgggcgctcgtgcaga 290 Query: 219 agctgacgggcgcgcc 234 |||||||||||||||| Sbjct: 291 agctgacgggcgcgcc 306 Score = 85.7 bits (43), Expect = 3e-13 Identities = 90/105 (85%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 319 ccaccaccacagcctcatgcactcgccggtctcgcccatgg---acgcctacgtcctggc 375 |||||||||||| || |||||||||||||| |||||||||| |||||||||| |||| Sbjct: 433 ccaccaccacaggctgatgcactcgccggtgtcgcccatggactacgcctacgtgatggc 492 Query: 376 ttcctcctcctcgtcgctgtcgccgtcgccgccctcgtcgtcgtc 420 ||||||||||||||| |||| | |||| ||| ||||||||||| Sbjct: 493 ctcctcctcctcgtcgtcgtcgtcctcgctgccgtcgtcgtcgtc 537 >emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete sequence Length = 123337 Score = 246 bits (124), Expect = 1e-61 Identities = 184/203 (90%), Gaps = 12/203 (5%) Strand = Plus / Minus Query: 389 tcgctgtcgccgtcgccgccc---tcgtcgtcgtcgtgcggggtggtg---ataagcaag 442 |||||||||||||||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 9476 tcgctgtcgccgtcgccgccggcgtcgtcgtcgtcgtgcggggtggtggtgataaccaag 9417 Query: 443 gaggaagaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 502 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9416 gaggaggaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 9357 Query: 503 ccgaggagcggc------ggcgacggcgagaggccgaagctgctgccgttgttccccgtc 556 |||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 9356 ccgaggagcggcggcgccggcgacggcgagaggcccaagctgctgccgctgttccccgtc 9297 Query: 557 tactcccctaggagctcctcctt 579 ||||||| |||||||||||||| Sbjct: 9296 cactcccccaggagctcctcctt 9274 Score = 119 bits (60), Expect = 2e-23 Identities = 66/68 (97%) Strand = Plus / Minus Query: 167 aacacgacgttcgtgcaggccgacccgacgacgttccgcgcgctcgtgcagaagctgacg 226 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 9776 aacacgacgttcgtgcaggccgacccggcgacgttccgggcgctcgtgcagaagctgacg 9717 Query: 227 ggcgcgcc 234 |||||||| Sbjct: 9716 ggcgcgcc 9709 Score = 85.7 bits (43), Expect = 3e-13 Identities = 90/105 (85%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 319 ccaccaccacagcctcatgcactcgccggtctcgcccatgg---acgcctacgtcctggc 375 |||||||||||| || |||||||||||||| |||||||||| |||||||||| |||| Sbjct: 9582 ccaccaccacaggctgatgcactcgccggtgtcgcccatggactacgcctacgtgatggc 9523 Query: 376 ttcctcctcctcgtcgctgtcgccgtcgccgccctcgtcgtcgtc 420 ||||||||||||||| |||| | |||| ||| ||||||||||| Sbjct: 9522 ctcctcctcctcgtcgtcgtcgtcctcgctgccgtcgtcgtcgtc 9478 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 246 bits (124), Expect = 1e-61 Identities = 184/203 (90%), Gaps = 12/203 (5%) Strand = Plus / Minus Query: 389 tcgctgtcgccgtcgccgccc---tcgtcgtcgtcgtgcggggtggtg---ataagcaag 442 |||||||||||||||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 32886396 tcgctgtcgccgtcgccgccggcgtcgtcgtcgtcgtgcggggtggtggtgataaccaag 32886337 Query: 443 gaggaagaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 502 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32886336 gaggaggaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 32886277 Query: 503 ccgaggagcggc------ggcgacggcgagaggccgaagctgctgccgttgttccccgtc 556 |||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 32886276 ccgaggagcggcggcgccggcgacggcgagaggcccaagctgctgccgctgttccccgtc 32886217 Query: 557 tactcccctaggagctcctcctt 579 ||||||| |||||||||||||| Sbjct: 32886216 cactcccccaggagctcctcctt 32886194 Score = 127 bits (64), Expect = 8e-26 Identities = 73/76 (96%) Strand = Plus / Minus Query: 159 tggagacgaacacgacgttcgtgcaggccgacccgacgacgttccgcgcgctcgtgcaga 218 |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 32886704 tggacacgaacacgacgttcgtgcaggccgacccggcgacgttccgggcgctcgtgcaga 32886645 Query: 219 agctgacgggcgcgcc 234 |||||||||||||||| Sbjct: 32886644 agctgacgggcgcgcc 32886629 Score = 85.7 bits (43), Expect = 3e-13 Identities = 90/105 (85%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 319 ccaccaccacagcctcatgcactcgccggtctcgcccatgg---acgcctacgtcctggc 375 |||||||||||| || |||||||||||||| |||||||||| |||||||||| |||| Sbjct: 32886502 ccaccaccacaggctgatgcactcgccggtgtcgcccatggactacgcctacgtgatggc 32886443 Query: 376 ttcctcctcctcgtcgctgtcgccgtcgccgccctcgtcgtcgtc 420 ||||||||||||||| |||| | |||| ||| ||||||||||| Sbjct: 32886442 ctcctcctcctcgtcgtcgtcgtcctcgctgccgtcgtcgtcgtc 32886398 >emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11, complete sequence Length = 134231 Score = 246 bits (124), Expect = 1e-61 Identities = 184/203 (90%), Gaps = 12/203 (5%) Strand = Plus / Minus Query: 389 tcgctgtcgccgtcgccgccc---tcgtcgtcgtcgtgcggggtggtg---ataagcaag 442 |||||||||||||||||||| |||||||||||||||||||||||| |||| |||| Sbjct: 29245 tcgctgtcgccgtcgccgccggcgtcgtcgtcgtcgtgcggggtggtggtgataaccaag 29186 Query: 443 gaggaagaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 502 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29185 gaggaggaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 29126 Query: 503 ccgaggagcggc------ggcgacggcgagaggccgaagctgctgccgttgttccccgtc 556 |||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 29125 ccgaggagcggcggcgccggcgacggcgagaggcccaagctgctgccgctgttccccgtc 29066 Query: 557 tactcccctaggagctcctcctt 579 ||||||| |||||||||||||| Sbjct: 29065 cactcccccaggagctcctcctt 29043 Score = 127 bits (64), Expect = 8e-26 Identities = 73/76 (96%) Strand = Plus / Minus Query: 159 tggagacgaacacgacgttcgtgcaggccgacccgacgacgttccgcgcgctcgtgcaga 218 |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 29553 tggacacgaacacgacgttcgtgcaggccgacccggcgacgttccgggcgctcgtgcaga 29494 Query: 219 agctgacgggcgcgcc 234 |||||||||||||||| Sbjct: 29493 agctgacgggcgcgcc 29478 Score = 85.7 bits (43), Expect = 3e-13 Identities = 90/105 (85%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 319 ccaccaccacagcctcatgcactcgccggtctcgcccatgg---acgcctacgtcctggc 375 |||||||||||| || |||||||||||||| |||||||||| |||||||||| |||| Sbjct: 29351 ccaccaccacaggctgatgcactcgccggtgtcgcccatggactacgcctacgtgatggc 29292 Query: 376 ttcctcctcctcgtcgctgtcgccgtcgccgccctcgtcgtcgtc 420 ||||||||||||||| |||| | |||| ||| ||||||||||| Sbjct: 29291 ctcctcctcctcgtcgtcgtcgtcctcgctgccgtcgtcgtcgtc 29247 >dbj|AK067139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096O17, full insert sequence Length = 885 Score = 246 bits (124), Expect = 1e-61 Identities = 184/203 (90%), Gaps = 12/203 (5%) Strand = Plus / Plus Query: 389 tcgctgtcgccgtcgccgccc---tcgtcgtcgtcgtgcggggtg---gtgataagcaag 442 |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| Sbjct: 540 tcgctgtcgccgtcgccgccggcgtcgtcgtcgtcgtgcggggtggtggtgataaccaag 599 Query: 443 gaggaagaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 502 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 gaggaggaggagagggaggagaaggccatcgcctccaaggggttctacctgcactcgtcg 659 Query: 503 ccgaggagcgg------cggcgacggcgagaggccgaagctgctgccgttgttccccgtc 556 ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 660 ccgaggagcggcggcgccggcgacggcgagaggcccaagctgctgccgctgttccccgtc 719 Query: 557 tactcccctaggagctcctcctt 579 ||||||| |||||||||||||| Sbjct: 720 cactcccccaggagctcctcctt 742 Score = 127 bits (64), Expect = 8e-26 Identities = 73/76 (96%) Strand = Plus / Plus Query: 159 tggagacgaacacgacgttcgtgcaggccgacccgacgacgttccgcgcgctcgtgcaga 218 |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 232 tggacacgaacacgacgttcgtgcaggccgacccggcgacgttccgggcgctcgtgcaga 291 Query: 219 agctgacgggcgcgcc 234 |||||||||||||||| Sbjct: 292 agctgacgggcgcgcc 307 Score = 85.7 bits (43), Expect = 3e-13 Identities = 90/105 (85%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 319 ccaccaccacagcctcatgcactcgccggtctcgcccatgg---acgcctacgtcctggc 375 |||||||||||| || |||||||||||||| |||||||||| |||||||||| |||| Sbjct: 434 ccaccaccacaggctgatgcactcgccggtgtcgcccatggactacgcctacgtgatggc 493 Query: 376 ttcctcctcctcgtcgctgtcgccgtcgccgccctcgtcgtcgtc 420 ||||||||||||||| |||| | |||| ||| ||||||||||| Sbjct: 494 ctcctcctcctcgtcgtcgtcgtcctcgctgccgtcgtcgtcgtc 538