BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst022b08 (1026 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK122073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 599 e-168 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 gb|AY106844.1| Zea mays PCO147515 mRNA sequence 147 1e-31 >dbj|AK122073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P11, full insert sequence Length = 2007 Score = 599 bits (302), Expect = e-168 Identities = 575/666 (86%) Strand = Plus / Plus Query: 361 gaggacttcctgggcgtcaagccgctcctcgagaagctcgagcgccggaaggccaaggag 420 ||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||| Sbjct: 288 gaggactacctgggcgtcaagccgctcatcgagaagctcgagcgccgcagggccaaggag 347 Query: 421 gcggccgcggccgacgactccttctgggagcccaccgactccgacagtgacgaggacgac 480 | ||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 348 gaggccgcgccggacgattccttctgggagcccaccgactccgacagtgacgaggaggac 407 Query: 481 cagcgctacacccccgacgccatcaagcgccgcgtcgacgaattcgaccgcaagtgcaag 540 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 408 gagcgctacacccctgacgccatcaagcgccgcgtcgacgagttcgagcgcaagtgcaac 467 Query: 541 cgccactccgagctcctccgctccttcgccgaggccgaaaccctcgatgatgctcataaa 600 ||||||||||| ||||| |||||||||||||| ||||||||||| || ||||| || ||| Sbjct: 468 cgccactccgaactcctacgctccttcgccgaagccgaaacccttgacgatgcccacaaa 527 Query: 601 tggatggcaaaaatcgataaattcgaggagcgtcacttgaaattgccactggagtacaga 660 |||||| | || ||||| | |||||||||||| || ||||| | ||||||||||||||| Sbjct: 528 tggatgaccaagatcgacagattcgaggagcgccatttgaagcttccactggagtacaga 587 Query: 661 gttattggggacacgatgaattgtctcaaagattccgcagggaaagaccgctttgttctc 720 || || || |||| |||||| | ||||||||| || | || || ||||||||| ||||| Sbjct: 588 gtcatcggcgacatgatgaaccgcctcaaagatgccaccggcaaggaccgctttcttctc 647 Query: 721 ctccggaagctgaattgggctgttagactgatggagtgcaaggaggcatatgaccccaac 780 |||| |||||| || | ||||||||| | ||||| |||| ||| ||||| || |||| | Sbjct: 648 ctccagaagcttaaccgagctgttagaatcatggaatgcagggaagcatacgatcccagc 707 Query: 781 aaccccgcgaattttgggattattcagcaccagcaggttggttctccagaggatctagtg 840 |||||| | ||||| ||| | || || ||||||||||| || ||||| |||||||| ||| Sbjct: 708 aacccctccaatttcggggtcatccaacaccagcaggtcggctctccggaggatcttgtg 767 Query: 841 gacaacgctggctttgacaaggagaagcagatgatccaaggggcaagcctcgaggaagaa 900 ||| ||||||||||||| |||||||||||||||||||||||| | ||| || || Sbjct: 768 ctcaatgctggctttgacagggagaagcagatgatccaaggggctggtgacgacgacgac 827 Query: 901 gacgaggaattcaatgaagcaaaggagaaggatgatctgctcatagagaaattgaattct 960 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 828 gacgaggaattcaatgaagacaaggagaaggatgatctgctcatagagaagttgaattct 887 Query: 961 attgaaaagaagatcgaggagaagttggcagagctggatcacacgtttggtaaaaagggc 1020 || |||||||||||||||||||| || || ||| | ||||| ||||||||||| |||||| Sbjct: 888 atcgaaaagaagatcgaggagaaattagctgagttagatcatacgtttggtaagaagggc 947 Query: 1021 agagtt 1026 |||||| Sbjct: 948 agagtt 953 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 305 bits (154), Expect = 2e-79 Identities = 376/450 (83%) Strand = Plus / Minus Query: 577 gaaaccctcgatgatgctcataaatggatggcaaaaatcgataaattcgaggagcgtcac 636 |||||||| || ||||| || ||||||||| | || ||||| | |||||||||||| || Sbjct: 129545 gaaacccttgacgatgcccacaaatggatgaccaagatcgacagattcgaggagcgccat 129486 Query: 637 ttgaaattgccactggagtacagagttattggggacacgatgaattgtctcaaagattcc 696 ||||| | ||||||||||||||||| || || |||| |||||| | ||||||||| || Sbjct: 129485 ttgaagcttccactggagtacagagtcatcggcgacatgatgaaccgcctcaaagatgcc 129426 Query: 697 gcagggaaagaccgctttgttctcctccggaagctgaattgggctgttagactgatggag 756 | || || ||||||||| ||||||||| |||||| || | ||||||||| | ||||| Sbjct: 129425 accggcaaggaccgctttcttctcctccagaagcttaaccgagctgttagaatcatggaa 129366 Query: 757 tgcaaggaggcatatgaccccaacaaccccgcgaattttgggattattcagcaccagcag 816 |||| ||| ||||| || |||| ||||||| | ||||| ||| | || || ||||||||| Sbjct: 129365 tgcagggaagcatacgatcccagcaacccctccaatttcggggtcatccaacaccagcag 129306 Query: 817 gttggttctccagaggatctagtggacaacgctggctttgacaaggagaagcagatgatc 876 || || ||||| |||||||| ||| ||| ||||||||||||| |||||||||||||||| Sbjct: 129305 gtcggctctccggaggatcttgtgctcaatgctggctttgacagggagaagcagatgatc 129246 Query: 877 caaggggcaagcctcgaggaagaagacgaggaattcaatgaagcaaaggagaaggatgat 936 |||||||| | ||| || || ||||||||||||||||||| ||||||||||||||| Sbjct: 129245 caaggggctggtgacgacgacgacgacgaggaattcaatgaagacaaggagaaggatgat 129186 Query: 937 ctgctcatagagaaattgaattctattgaaaagaagatcgaggagaagttggcagagctg 996 |||||||||||||| ||||||||||| |||||||||||||||||||| || || ||| | Sbjct: 129185 ctgctcatagagaagttgaattctatcgaaaagaagatcgaggagaaattagctgagtta 129126 Query: 997 gatcacacgtttggtaaaaagggcagagtt 1026 ||||| ||||||||||| |||||||||||| Sbjct: 129125 gatcatacgtttggtaagaagggcagagtt 129096 Score = 295 bits (149), Expect = 2e-76 Identities = 200/217 (92%) Strand = Plus / Minus Query: 361 gaggacttcctgggcgtcaagccgctcctcgagaagctcgagcgccggaaggccaaggag 420 ||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||| Sbjct: 129839 gaggactacctgggcgtcaagccgctcatcgagaagctcgagcgccgcagggccaaggag 129780 Query: 421 gcggccgcggccgacgactccttctgggagcccaccgactccgacagtgacgaggacgac 480 | ||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 129779 gaggccgcgccggacgattccttctgggagcccaccgactccgacagtgacgaggaggac 129720 Query: 481 cagcgctacacccccgacgccatcaagcgccgcgtcgacgaattcgaccgcaagtgcaag 540 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 129719 gagcgctacacccctgacgccatcaagcgccgcgtcgacgagttcgagcgcaagtgcaac 129660 Query: 541 cgccactccgagctcctccgctccttcgccgaggccg 577 ||||||||||| ||||| |||||||||||||| |||| Sbjct: 129659 cgccactccgaactcctacgctccttcgccgaagccg 129623 >dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 305 bits (154), Expect = 2e-79 Identities = 376/450 (83%) Strand = Plus / Minus Query: 577 gaaaccctcgatgatgctcataaatggatggcaaaaatcgataaattcgaggagcgtcac 636 |||||||| || ||||| || ||||||||| | || ||||| | |||||||||||| || Sbjct: 124154 gaaacccttgacgatgcccacaaatggatgaccaagatcgacagattcgaggagcgccat 124095 Query: 637 ttgaaattgccactggagtacagagttattggggacacgatgaattgtctcaaagattcc 696 ||||| | ||||||||||||||||| || || |||| |||||| | ||||||||| || Sbjct: 124094 ttgaagcttccactggagtacagagtcatcggcgacatgatgaaccgcctcaaagatgcc 124035 Query: 697 gcagggaaagaccgctttgttctcctccggaagctgaattgggctgttagactgatggag 756 | || || ||||||||| ||||||||| |||||| || | ||||||||| | ||||| Sbjct: 124034 accggcaaggaccgctttcttctcctccagaagcttaaccgagctgttagaatcatggaa 123975 Query: 757 tgcaaggaggcatatgaccccaacaaccccgcgaattttgggattattcagcaccagcag 816 |||| ||| ||||| || |||| ||||||| | ||||| ||| | || || ||||||||| Sbjct: 123974 tgcagggaagcatacgatcccagcaacccctccaatttcggggtcatccaacaccagcag 123915 Query: 817 gttggttctccagaggatctagtggacaacgctggctttgacaaggagaagcagatgatc 876 || || ||||| |||||||| ||| ||| ||||||||||||| |||||||||||||||| Sbjct: 123914 gtcggctctccggaggatcttgtgctcaatgctggctttgacagggagaagcagatgatc 123855 Query: 877 caaggggcaagcctcgaggaagaagacgaggaattcaatgaagcaaaggagaaggatgat 936 |||||||| | ||| || || ||||||||||||||||||| ||||||||||||||| Sbjct: 123854 caaggggctggtgacgacgacgacgacgaggaattcaatgaagacaaggagaaggatgat 123795 Query: 937 ctgctcatagagaaattgaattctattgaaaagaagatcgaggagaagttggcagagctg 996 |||||||||||||| ||||||||||| |||||||||||||||||||| || || ||| | Sbjct: 123794 ctgctcatagagaagttgaattctatcgaaaagaagatcgaggagaaattagctgagtta 123735 Query: 997 gatcacacgtttggtaaaaagggcagagtt 1026 ||||| ||||||||||| |||||||||||| Sbjct: 123734 gatcatacgtttggtaagaagggcagagtt 123705 Score = 295 bits (149), Expect = 2e-76 Identities = 200/217 (92%) Strand = Plus / Minus Query: 361 gaggacttcctgggcgtcaagccgctcctcgagaagctcgagcgccggaaggccaaggag 420 ||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||| Sbjct: 124448 gaggactacctgggcgtcaagccgctcatcgagaagctcgagcgccgcagggccaaggag 124389 Query: 421 gcggccgcggccgacgactccttctgggagcccaccgactccgacagtgacgaggacgac 480 | ||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124388 gaggccgcgccggacgattccttctgggagcccaccgactccgacagtgacgaggaggac 124329 Query: 481 cagcgctacacccccgacgccatcaagcgccgcgtcgacgaattcgaccgcaagtgcaag 540 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 124328 gagcgctacacccctgacgccatcaagcgccgcgtcgacgagttcgagcgcaagtgcaac 124269 Query: 541 cgccactccgagctcctccgctccttcgccgaggccg 577 ||||||||||| ||||| |||||||||||||| |||| Sbjct: 124268 cgccactccgaactcctacgctccttcgccgaagccg 124232 >dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 305 bits (154), Expect = 2e-79 Identities = 376/450 (83%) Strand = Plus / Minus Query: 577 gaaaccctcgatgatgctcataaatggatggcaaaaatcgataaattcgaggagcgtcac 636 |||||||| || ||||| || ||||||||| | || ||||| | |||||||||||| || Sbjct: 78572 gaaacccttgacgatgcccacaaatggatgaccaagatcgacagattcgaggagcgccat 78513 Query: 637 ttgaaattgccactggagtacagagttattggggacacgatgaattgtctcaaagattcc 696 ||||| | ||||||||||||||||| || || |||| |||||| | ||||||||| || Sbjct: 78512 ttgaagcttccactggagtacagagtcatcggcgacatgatgaaccgcctcaaagatgcc 78453 Query: 697 gcagggaaagaccgctttgttctcctccggaagctgaattgggctgttagactgatggag 756 | || || ||||||||| ||||||||| |||||| || | ||||||||| | ||||| Sbjct: 78452 accggcaaggaccgctttcttctcctccagaagcttaaccgagctgttagaatcatggaa 78393 Query: 757 tgcaaggaggcatatgaccccaacaaccccgcgaattttgggattattcagcaccagcag 816 |||| ||| ||||| || |||| ||||||| | ||||| ||| | || || ||||||||| Sbjct: 78392 tgcagggaagcatacgatcccagcaacccctccaatttcggggtcatccaacaccagcag 78333 Query: 817 gttggttctccagaggatctagtggacaacgctggctttgacaaggagaagcagatgatc 876 || || ||||| |||||||| ||| ||| ||||||||||||| |||||||||||||||| Sbjct: 78332 gtcggctctccggaggatcttgtgctcaatgctggctttgacagggagaagcagatgatc 78273 Query: 877 caaggggcaagcctcgaggaagaagacgaggaattcaatgaagcaaaggagaaggatgat 936 |||||||| | ||| || || ||||||||||||||||||| ||||||||||||||| Sbjct: 78272 caaggggctggtgacgacgacgacgacgaggaattcaatgaagacaaggagaaggatgat 78213 Query: 937 ctgctcatagagaaattgaattctattgaaaagaagatcgaggagaagttggcagagctg 996 |||||||||||||| ||||||||||| |||||||||||||||||||| || || ||| | Sbjct: 78212 ctgctcatagagaagttgaattctatcgaaaagaagatcgaggagaaattagctgagtta 78153 Query: 997 gatcacacgtttggtaaaaagggcagagtt 1026 ||||| ||||||||||| |||||||||||| Sbjct: 78152 gatcatacgtttggtaagaagggcagagtt 78123 Score = 295 bits (149), Expect = 2e-76 Identities = 200/217 (92%) Strand = Plus / Minus Query: 361 gaggacttcctgggcgtcaagccgctcctcgagaagctcgagcgccggaaggccaaggag 420 ||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||| Sbjct: 78866 gaggactacctgggcgtcaagccgctcatcgagaagctcgagcgccgcagggccaaggag 78807 Query: 421 gcggccgcggccgacgactccttctgggagcccaccgactccgacagtgacgaggacgac 480 | ||||||| | ||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 78806 gaggccgcgccggacgattccttctgggagcccaccgactccgacagtgacgaggaggac 78747 Query: 481 cagcgctacacccccgacgccatcaagcgccgcgtcgacgaattcgaccgcaagtgcaag 540 ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 78746 gagcgctacacccctgacgccatcaagcgccgcgtcgacgagttcgagcgcaagtgcaac 78687 Query: 541 cgccactccgagctcctccgctccttcgccgaggccg 577 ||||||||||| ||||| |||||||||||||| |||| Sbjct: 78686 cgccactccgaactcctacgctccttcgccgaagccg 78650 >gb|AY106844.1| Zea mays PCO147515 mRNA sequence Length = 1259 Score = 147 bits (74), Expect = 1e-31 Identities = 188/226 (83%) Strand = Plus / Plus Query: 759 caaggaggcatatgaccccaacaaccccgcgaattttgggattattcagcaccagcaggt 818 |||||| || || ||||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 8 caaggaagcctacgaccccagtaaccctgcaaactttgggatcatccagcaccagcaggt 67 Query: 819 tggttctccagaggatctagtggacaacgctggctttgacaaggagaagcagatgatcca 878 ||||||||| |||||| | ||| ||| || |||||||| |||||||||||||||||||| Sbjct: 68 tggttctcctgaggatgtcgtgctcaatgccggctttgataaggagaagcagatgatcca 127 Query: 879 aggggcaagcctcgaggaagaagacgaggaattcaatgaagcaaaggagaaggatgatct 938 ||||||| || ||||| | ||||||||||||||||| | ||||||| ||||||| | Sbjct: 128 aggggcagaacttgaggatgtcgacgaggaattcaatgatgtgaaggagagggatgatat 187 Query: 939 gctcatagagaaattgaattctattgaaaagaagatcgaggagaag 984 |||||||| ||| | || |||||||||||||||| |||| |||| Sbjct: 188 tctcatagataaactcgatgctattgaaaagaagattgaggggaag 233