BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst021k20 (857 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052878.1| Oryza sativa (japonica cultivar-group) Os02g... 751 0.0 dbj|AK121976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 743 0.0 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40 dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic D... 176 1e-40 >ref|NM_001052878.1| Oryza sativa (japonica cultivar-group) Os02g0226000 (Os02g0226000) mRNA, complete cds Length = 1144 Score = 751 bits (379), Expect = 0.0 Identities = 512/555 (92%), Gaps = 1/555 (0%) Strand = Plus / Plus Query: 82 gtggaggcagtacctgctccagctccagctccacccgcttcgcaccaagatgatcacggc 141 |||| |||||||||||| |||||||||||||||||| || || ||||||||||||||||| Sbjct: 339 gtggcggcagtacctgcgccagctccagctccaccctctccggaccaagatgatcacggc 398 Query: 142 ggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccgggtaccagaagat 201 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 399 ggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccggctaccagaggat 458 Query: 202 tgagaagcgccgcctcctgctcaagatgctctttgggtttgcatatggtggcccatttgg 261 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 459 cgagaagcgccgcctcctgctcaagatgctctttgggtttgcttatggtggcccttttgg 518 Query: 262 gcatttcctgtataaagtgttggattatatctttaaaggaaagaaggacaccaaaactgt 321 |||||||| |||||||||| ||||||||||| ||||| |||||||| ||||||||| | Sbjct: 519 ccatttcctccataaagtgttagattatatcttcaaagggaagaaggataccaaaactat 578 Query: 322 agctaagaaggtgttgctggagcagatcgtttcctctccctggaacaatatgctcttctt 381 ||| ||||||||||| |||||||||||| ||| ||||||||||| ||| |||||||||| Sbjct: 579 agccaagaaggtgttactggagcagatcacttcttctccctggaataatctgctcttctt 638 Query: 382 gttctattatggatatgttgttgagaggaggcctttcaaggaggtgaagactagggtcag 441 |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | Sbjct: 639 gttctattatggatatgttgttgagaggaggccttttaaggaggtgaagaccagggttaa 698 Query: 442 gaaacaatatccttcagtgcaattgtctgcttggatgttttggccaatagttggttggat 501 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 gaaacaatatccctcggtgcaattgtctgcttggatgttttggccaatagttggttggat 758 Query: 502 aaaccatcagtacatgccgttgcagtctcgggtgattttccacagctttgttgcatgttg 561 ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 759 aaatcatatgtacatgccgttgcagttccgggtgattttccacagctttgttgcatgttg 818 Query: 562 ttggggaatatttctcaaccttcgtgcaagggctatgtctttgaagcagtcgtagacaag 621 ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| || Sbjct: 819 ctgggggatatttcttaaccttcgtgcaagggccatgtctttgaagcagtcgtagagaa- 877 Query: 622 tttagaaggaaaaaa 636 ||||| ||||||||| Sbjct: 878 tttagtaggaaaaaa 892 >dbj|AK121976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108J17, full insert sequence Length = 1146 Score = 743 bits (375), Expect = 0.0 Identities = 511/555 (92%), Gaps = 1/555 (0%) Strand = Plus / Plus Query: 82 gtggaggcagtacctgctccagctccagctccacccgcttcgcaccaagatgatcacggc 141 |||| |||||||||||| |||||||||||||||||| || || ||||||||||||||||| Sbjct: 341 gtggcggcagtacctgcgccagctccagctccaccctctccggaccaagatgatcacggc 400 Query: 142 ggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccgggtaccagaagat 201 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 401 ggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccggctaccagaggat 460 Query: 202 tgagaagcgccgcctcctgctcaagatgctctttgggtttgcatatggtggcccatttgg 261 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 461 cgagaagcgccgcctcctgctcaagatgctctttgggtttgcttatggtggcccttttgg 520 Query: 262 gcatttcctgtataaagtgttggattatatctttaaaggaaagaaggacaccaaaactgt 321 |||||||| |||||||||| ||||||||||| ||||| |||||||| ||||||||| | Sbjct: 521 ccatttcctccataaagtgttagattatatcttcaaagggaagaaggataccaaaactat 580 Query: 322 agctaagaaggtgttgctggagcagatcgtttcctctccctggaacaatatgctcttctt 381 ||| ||||||||||| |||||||||||| ||| ||||||||||| ||| |||||||||| Sbjct: 581 agccaagaaggtgttactggagcagatcacttcttctccctggaataatctgctcttctt 640 Query: 382 gttctattatggatatgttgttgagaggaggcctttcaaggaggtgaagactagggtcag 441 |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | Sbjct: 641 gttctattatggatatgttgttgagaggaggccttttaaggaggtgaagaccagggttaa 700 Query: 442 gaaacaatatccttcagtgcaattgtctgcttggatgttttggccaatagttggttggat 501 |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 701 gaaacaatatccctcggtgcagttgtctgcttggatgttttggccaatagttggttggat 760 Query: 502 aaaccatcagtacatgccgttgcagtctcgggtgattttccacagctttgttgcatgttg 561 ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 761 aaatcatatgtacatgccgttgcagttccgggtgattttccacagctttgttgcatgttg 820 Query: 562 ttggggaatatttctcaaccttcgtgcaagggctatgtctttgaagcagtcgtagacaag 621 ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| || Sbjct: 821 ctgggggatatttcttaaccttcgtgcaagggccatgtctttgaagcagtcgtagagaa- 879 Query: 622 tttagaaggaaaaaa 636 ||||| ||||||||| Sbjct: 880 tttagtaggaaaaaa 894 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 176 bits (89), Expect = 1e-40 Identities = 98/101 (97%) Strand = Plus / Minus Query: 129 agatgatcacggcggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7068125 agatgatcacggcggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccg 7068066 Query: 189 ggtaccagaagattgagaagcgccgcctcctgctcaagatg 229 | ||||||| ||| ||||||||||||||||||||||||||| Sbjct: 7068065 gctaccagaggatcgagaagcgccgcctcctgctcaagatg 7068025 Score = 127 bits (64), Expect = 8e-26 Identities = 79/84 (94%) Strand = Plus / Minus Query: 478 gttttggccaatagttggttggataaaccatcagtacatgccgttgcagtctcgggtgat 537 ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| Sbjct: 7065993 gttttggccaatagttggttggataaatcatatgtacatgccgttgcagttccgggtgat 7065934 Query: 538 tttccacagctttgttgcatgttg 561 |||||||||||||||||||||||| Sbjct: 7065933 tttccacagctttgttgcatgttg 7065910 Score = 121 bits (61), Expect = 5e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 229 gctctttgggtttgcatatggtggcccatttgggcatttcctgtataaagtgttggatta 288 ||||||||||||||| ||||||||||| ||||| |||||||| |||||||||| ||||| Sbjct: 7067079 gctctttgggtttgcttatggtggcccttttggccatttcctccataaagtgttagatta 7067020 Query: 289 tatctttaaaggaaagaaggacaccaaaactgtagctaagaaggt 333 |||||| ||||| |||||||| ||||||||| |||| |||||||| Sbjct: 7067019 tatcttcaaagggaagaaggataccaaaactatagccaagaaggt 7066975 Score = 109 bits (55), Expect = 2e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 330 aggtgttgctggagcagatcgtttcctctccctggaacaatatgctcttcttgttctatt 389 ||||||| |||||||||||| ||| ||||||||||| ||| |||||||||||||||||| Sbjct: 7066640 aggtgttactggagcagatcacttcttctccctggaataatctgctcttcttgttctatt 7066581 Query: 390 atggatatgttgttgagag 408 ||||||||||||||||||| Sbjct: 7066580 atggatatgttgttgagag 7066562 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Minus Query: 408 ggaggcctttcaaggaggtgaagactagggtcaggaaacaatatccttcagtgcaattgt 467 |||||||||| |||||||||||||| ||||| | |||||||||||| || |||||||||| Sbjct: 7066150 ggaggccttttaaggaggtgaagaccagggttaagaaacaatatccctcggtgcaattgt 7066091 Query: 468 ctgcttggatg 478 ||||||||||| Sbjct: 7066090 ctgcttggatg 7066080 Score = 89.7 bits (45), Expect = 2e-14 Identities = 67/73 (91%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 564 ggggaatatttctcaaccttcgtgcaagggctatgtctttgaagcagtcgtagacaagtt 623 |||| |||||||| ||||||||||||||||| |||||||||||||||||||||| || || Sbjct: 7065814 gggggatatttcttaaccttcgtgcaagggccatgtctttgaagcagtcgtagagaa-tt 7065756 Query: 624 tagaaggaaaaaa 636 ||| ||||||||| Sbjct: 7065755 tagtaggaaaaaa 7065743 >dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 176 bits (89), Expect = 1e-40 Identities = 98/101 (97%) Strand = Plus / Minus Query: 129 agatgatcacggcggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71544 agatgatcacggcggggtgcctcgccggcgtcagcgactccgtggcgcagaagctctccg 71485 Query: 189 ggtaccagaagattgagaagcgccgcctcctgctcaagatg 229 | ||||||| ||| ||||||||||||||||||||||||||| Sbjct: 71484 gctaccagaggatcgagaagcgccgcctcctgctcaagatg 71444 Score = 127 bits (64), Expect = 8e-26 Identities = 79/84 (94%) Strand = Plus / Minus Query: 478 gttttggccaatagttggttggataaaccatcagtacatgccgttgcagtctcgggtgat 537 ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| Sbjct: 69412 gttttggccaatagttggttggataaatcatatgtacatgccgttgcagttccgggtgat 69353 Query: 538 tttccacagctttgttgcatgttg 561 |||||||||||||||||||||||| Sbjct: 69352 tttccacagctttgttgcatgttg 69329 Score = 121 bits (61), Expect = 5e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 229 gctctttgggtttgcatatggtggcccatttgggcatttcctgtataaagtgttggatta 288 ||||||||||||||| ||||||||||| ||||| |||||||| |||||||||| ||||| Sbjct: 70498 gctctttgggtttgcttatggtggcccttttggccatttcctccataaagtgttagatta 70439 Query: 289 tatctttaaaggaaagaaggacaccaaaactgtagctaagaaggt 333 |||||| ||||| |||||||| ||||||||| |||| |||||||| Sbjct: 70438 tatcttcaaagggaagaaggataccaaaactatagccaagaaggt 70394 Score = 109 bits (55), Expect = 2e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 330 aggtgttgctggagcagatcgtttcctctccctggaacaatatgctcttcttgttctatt 389 ||||||| |||||||||||| ||| ||||||||||| ||| |||||||||||||||||| Sbjct: 70059 aggtgttactggagcagatcacttcttctccctggaataatctgctcttcttgttctatt 70000 Query: 390 atggatatgttgttgagag 408 ||||||||||||||||||| Sbjct: 69999 atggatatgttgttgagag 69981 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Minus Query: 408 ggaggcctttcaaggaggtgaagactagggtcaggaaacaatatccttcagtgcaattgt 467 |||||||||| |||||||||||||| ||||| | |||||||||||| || |||||||||| Sbjct: 69569 ggaggccttttaaggaggtgaagaccagggttaagaaacaatatccctcggtgcaattgt 69510 Query: 468 ctgcttggatg 478 ||||||||||| Sbjct: 69509 ctgcttggatg 69499 Score = 89.7 bits (45), Expect = 2e-14 Identities = 67/73 (91%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 564 ggggaatatttctcaaccttcgtgcaagggctatgtctttgaagcagtcgtagacaagtt 623 |||| |||||||| ||||||||||||||||| |||||||||||||||||||||| || || Sbjct: 69233 gggggatatttcttaaccttcgtgcaagggccatgtctttgaagcagtcgtagagaa-tt 69175 Query: 624 tagaaggaaaaaa 636 ||| ||||||||| Sbjct: 69174 tagtaggaaaaaa 69162