BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst021i04 (1248 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001062954.1| Oryza sativa (japonica cultivar-group) Os05g... 333 1e-87 gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome... 333 1e-87 gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome... 333 1e-87 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 333 1e-87 dbj|AK111350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 1e-87 >ref|NM_001062954.1| Oryza sativa (japonica cultivar-group) Os05g0579300 (Os05g0579300) mRNA, complete cds Length = 1096 Score = 333 bits (168), Expect = 1e-87 Identities = 256/285 (89%), Gaps = 9/285 (3%) Strand = Plus / Plus Query: 712 gcaggcgcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 771 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 gcaggggcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 652 Query: 772 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcgctggtcgagca 831 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct: 653 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcactcgtcgaaca 712 Query: 832 gttctgcgcgcaggccggcgtgcggcggcaggtgctcaaggtctggatgcacaacaacaa 891 |||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||| Sbjct: 713 gttctgcgcgcaggtcggcgtgcggcgccaggtgttcaaggtgtggatgcacaacaacaa 772 Query: 892 gcaca------acagcagcagcagcagcagcagcaggatgcagctgcaggagcaacaatc 945 | || |||||||||| || || |||| |||| ||||| |||||||||||| || Sbjct: 773 gagcagcatcggcagcagcagcggcggcggcagtaggaggcagccgcaggagcaacagtc 832 Query: 946 ccaacagcagcagcagcagtagcagtagccatgggatgagacaag 990 |||||||||||||||| |||||||||||||||| |||||||| Sbjct: 833 acaacagcagcagcagc---agcagtagccatgggaggagacaag 874 Score = 117 bits (59), Expect = 1e-22 Identities = 77/83 (92%) Strand = Plus / Plus Query: 320 gaggtgaggtaccacgagtgcctgcgcaaccacgcggcggcgctgggcgggcacgtcgtg 379 ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 213 gaggtgaggtaccacgagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtg 272 Query: 380 gacggctgtggggagttcatgcc 402 ||||| || ||||||||||||| Sbjct: 273 gacggatgcagggagttcatgcc 295 Score = 107 bits (54), Expect = 1e-19 Identities = 60/62 (96%) Strand = Plus / Plus Query: 427 cgccctcaagtgcgctgcctgcagctgccaccgcagcttccaccgcaaggacgacgggca 486 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 317 cgccctcaagtgcgccgcctgcggctgccaccgcagcttccaccgcaaggacgacgggca 376 Query: 487 gc 488 || Sbjct: 377 gc 378 Score = 99.6 bits (50), Expect = 3e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 618 accaccacacgcccagcggcagcggcggcacgacgaccgagtcgtctagcgaggagcggg 677 |||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 505 accaccacaccccaagcggcagcggcggcacgacgaccgagtcgtccagcgaggagcggg 564 Query: 678 gcccgccctc 687 | || ||||| Sbjct: 565 ggcctccctc 574 >gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 333 bits (168), Expect = 1e-87 Identities = 256/285 (89%), Gaps = 9/285 (3%) Strand = Plus / Plus Query: 712 gcaggcgcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 771 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43832 gcaggggcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 43891 Query: 772 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcgctggtcgagca 831 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct: 43892 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcactcgtcgaaca 43951 Query: 832 gttctgcgcgcaggccggcgtgcggcggcaggtgctcaaggtctggatgcacaacaacaa 891 |||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||| Sbjct: 43952 gttctgcgcgcaggtcggcgtgcggcgccaggtgttcaaggtgtggatgcacaacaacaa 44011 Query: 892 gcaca------acagcagcagcagcagcagcagcaggatgcagctgcaggagcaacaatc 945 | || |||||||||| || || |||| |||| ||||| |||||||||||| || Sbjct: 44012 gagcagcatcggcagcagcagcggcggcggcagtaggaggcagccgcaggagcaacagtc 44071 Query: 946 ccaacagcagcagcagcagtagcagtagccatgggatgagacaag 990 |||||||||||||||| |||||||||||||||| |||||||| Sbjct: 44072 acaacagcagcagcagc---agcagtagccatgggaggagacaag 44113 Score = 117 bits (59), Expect = 1e-22 Identities = 77/83 (92%) Strand = Plus / Plus Query: 320 gaggtgaggtaccacgagtgcctgcgcaaccacgcggcggcgctgggcgggcacgtcgtg 379 ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 43452 gaggtgaggtaccacgagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtg 43511 Query: 380 gacggctgtggggagttcatgcc 402 ||||| || ||||||||||||| Sbjct: 43512 gacggatgcagggagttcatgcc 43534 Score = 107 bits (54), Expect = 1e-19 Identities = 60/62 (96%) Strand = Plus / Plus Query: 427 cgccctcaagtgcgctgcctgcagctgccaccgcagcttccaccgcaaggacgacgggca 486 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 43556 cgccctcaagtgcgccgcctgcggctgccaccgcagcttccaccgcaaggacgacgggca 43615 Query: 487 gc 488 || Sbjct: 43616 gc 43617 Score = 99.6 bits (50), Expect = 3e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 618 accaccacacgcccagcggcagcggcggcacgacgaccgagtcgtctagcgaggagcggg 677 |||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 43744 accaccacaccccaagcggcagcggcggcacgacgaccgagtcgtccagcgaggagcggg 43803 Query: 678 gcccgccctc 687 | || ||||| Sbjct: 43804 ggcctccctc 43813 >gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I, complete sequence Length = 99587 Score = 333 bits (168), Expect = 1e-87 Identities = 256/285 (89%), Gaps = 9/285 (3%) Strand = Plus / Plus Query: 712 gcaggcgcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 771 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31104 gcaggggcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 31163 Query: 772 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcgctggtcgagca 831 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct: 31164 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcactcgtcgaaca 31223 Query: 832 gttctgcgcgcaggccggcgtgcggcggcaggtgctcaaggtctggatgcacaacaacaa 891 |||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||| Sbjct: 31224 gttctgcgcgcaggtcggcgtgcggcgccaggtgttcaaggtgtggatgcacaacaacaa 31283 Query: 892 gcaca------acagcagcagcagcagcagcagcaggatgcagctgcaggagcaacaatc 945 | || |||||||||| || || |||| |||| ||||| |||||||||||| || Sbjct: 31284 gagcagcatcggcagcagcagcggcggcggcagtaggaggcagccgcaggagcaacagtc 31343 Query: 946 ccaacagcagcagcagcagtagcagtagccatgggatgagacaag 990 |||||||||||||||| |||||||||||||||| |||||||| Sbjct: 31344 acaacagcagcagcagc---agcagtagccatgggaggagacaag 31385 Score = 117 bits (59), Expect = 1e-22 Identities = 77/83 (92%) Strand = Plus / Plus Query: 320 gaggtgaggtaccacgagtgcctgcgcaaccacgcggcggcgctgggcgggcacgtcgtg 379 ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 30724 gaggtgaggtaccacgagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtg 30783 Query: 380 gacggctgtggggagttcatgcc 402 ||||| || ||||||||||||| Sbjct: 30784 gacggatgcagggagttcatgcc 30806 Score = 107 bits (54), Expect = 1e-19 Identities = 60/62 (96%) Strand = Plus / Plus Query: 427 cgccctcaagtgcgctgcctgcagctgccaccgcagcttccaccgcaaggacgacgggca 486 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 30828 cgccctcaagtgcgccgcctgcggctgccaccgcagcttccaccgcaaggacgacgggca 30887 Query: 487 gc 488 || Sbjct: 30888 gc 30889 Score = 99.6 bits (50), Expect = 3e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 618 accaccacacgcccagcggcagcggcggcacgacgaccgagtcgtctagcgaggagcggg 677 |||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 31016 accaccacaccccaagcggcagcggcggcacgacgaccgagtcgtccagcgaggagcggg 31075 Query: 678 gcccgccctc 687 | || ||||| Sbjct: 31076 ggcctccctc 31085 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 333 bits (168), Expect = 1e-87 Identities = 256/285 (89%), Gaps = 9/285 (3%) Strand = Plus / Plus Query: 712 gcaggcgcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 771 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28616040 gcaggggcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 28616099 Query: 772 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcgctggtcgagca 831 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct: 28616100 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcactcgtcgaaca 28616159 Query: 832 gttctgcgcgcaggccggcgtgcggcggcaggtgctcaaggtctggatgcacaacaacaa 891 |||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||| Sbjct: 28616160 gttctgcgcgcaggtcggcgtgcggcgccaggtgttcaaggtgtggatgcacaacaacaa 28616219 Query: 892 gcaca------acagcagcagcagcagcagcagcaggatgcagctgcaggagcaacaatc 945 | || |||||||||| || || |||| |||| ||||| |||||||||||| || Sbjct: 28616220 gagcagcatcggcagcagcagcggcggcggcagtaggaggcagccgcaggagcaacagtc 28616279 Query: 946 ccaacagcagcagcagcagtagcagtagccatgggatgagacaag 990 |||||||||||||||| |||||||||||||||| |||||||| Sbjct: 28616280 acaacagcagcagcagc---agcagtagccatgggaggagacaag 28616321 Score = 117 bits (59), Expect = 1e-22 Identities = 77/83 (92%) Strand = Plus / Plus Query: 320 gaggtgaggtaccacgagtgcctgcgcaaccacgcggcggcgctgggcgggcacgtcgtg 379 ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 28615660 gaggtgaggtaccacgagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtg 28615719 Query: 380 gacggctgtggggagttcatgcc 402 ||||| || ||||||||||||| Sbjct: 28615720 gacggatgcagggagttcatgcc 28615742 Score = 107 bits (54), Expect = 1e-19 Identities = 60/62 (96%) Strand = Plus / Plus Query: 427 cgccctcaagtgcgctgcctgcagctgccaccgcagcttccaccgcaaggacgacgggca 486 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 28615764 cgccctcaagtgcgccgcctgcggctgccaccgcagcttccaccgcaaggacgacgggca 28615823 Query: 487 gc 488 || Sbjct: 28615824 gc 28615825 Score = 99.6 bits (50), Expect = 3e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 618 accaccacacgcccagcggcagcggcggcacgacgaccgagtcgtctagcgaggagcggg 677 |||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 28615952 accaccacaccccaagcggcagcggcggcacgacgaccgagtcgtccagcgaggagcggg 28616011 Query: 678 gcccgccctc 687 | || ||||| Sbjct: 28616012 ggcctccctc 28616021 >dbj|AK111350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G06, full insert sequence Length = 1096 Score = 333 bits (168), Expect = 1e-87 Identities = 256/285 (89%), Gaps = 9/285 (3%) Strand = Plus / Plus Query: 712 gcaggcgcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 771 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 gcaggggcggcggaagcggttccggaccaagttcacgccggagcagaaggagcagatgct 652 Query: 772 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcgctggtcgagca 831 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct: 653 ggcgttcgcggagcgggtggggtggcggatgcagaagcaggacgaggcactcgtcgaaca 712 Query: 832 gttctgcgcgcaggccggcgtgcggcggcaggtgctcaaggtctggatgcacaacaacaa 891 |||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||| Sbjct: 713 gttctgcgcgcaggtcggcgtgcggcgccaggtgttcaaggtgtggatgcacaacaacaa 772 Query: 892 gcaca------acagcagcagcagcagcagcagcaggatgcagctgcaggagcaacaatc 945 | || |||||||||| || || |||| |||| ||||| |||||||||||| || Sbjct: 773 gagcagcatcggcagcagcagcggcggcggcagtaggaggcagccgcaggagcaacagtc 832 Query: 946 ccaacagcagcagcagcagtagcagtagccatgggatgagacaag 990 |||||||||||||||| |||||||||||||||| |||||||| Sbjct: 833 acaacagcagcagcagc---agcagtagccatgggaggagacaag 874 Score = 117 bits (59), Expect = 1e-22 Identities = 77/83 (92%) Strand = Plus / Plus Query: 320 gaggtgaggtaccacgagtgcctgcgcaaccacgcggcggcgctgggcgggcacgtcgtg 379 ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 213 gaggtgaggtaccacgagtgcctgcgcaaccacgccgcggcgatgggcggccacgtcgtg 272 Query: 380 gacggctgtggggagttcatgcc 402 ||||| || ||||||||||||| Sbjct: 273 gacggatgcagggagttcatgcc 295 Score = 107 bits (54), Expect = 1e-19 Identities = 60/62 (96%) Strand = Plus / Plus Query: 427 cgccctcaagtgcgctgcctgcagctgccaccgcagcttccaccgcaaggacgacgggca 486 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 317 cgccctcaagtgcgccgcctgcggctgccaccgcagcttccaccgcaaggacgacgggca 376 Query: 487 gc 488 || Sbjct: 377 gc 378 Score = 99.6 bits (50), Expect = 3e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 618 accaccacacgcccagcggcagcggcggcacgacgaccgagtcgtctagcgaggagcggg 677 |||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 505 accaccacaccccaagcggcagcggcggcacgacgaccgagtcgtccagcgaggagcggg 564 Query: 678 gcccgccctc 687 | || ||||| Sbjct: 565 ggcctccctc 574