BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst020n03 (757 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050812.1| Oryza sativa (japonica cultivar-group) Os01g... 511 e-141 dbj|AK067551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 511 e-141 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 289 8e-75 dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D... 289 8e-75 dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 289 8e-75 >ref|NM_001050812.1| Oryza sativa (japonica cultivar-group) Os01g0754100 (Os01g0754100) mRNA, complete cds Length = 866 Score = 511 bits (258), Expect = e-141 Identities = 366/402 (91%) Strand = Plus / Plus Query: 86 cggcggcggcgaagcggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgt 145 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 cggcggcggcgaagaggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgg 123 Query: 146 ccggccacacgctcgtcgccaaggtgctcagctccaagaccgtcctccagaagggccgcg 205 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 124 gcggccacacgctcgtcgccaaggtgctcagctccaagaccgtggtccagaagggccgcg 183 Query: 206 ccggcgcgggcgctgaccccgcggcaaggctaacgagaatcgccgagtgcgtcatcggcg 265 ||| |||||| || | ||| ||||| | | ||||| |||||||||||| ||||||||| Sbjct: 184 ccgccgcgggagcgggcccggcggcgcgtcccacgaggatcgccgagtgcctcatcggcg 243 Query: 266 acgagaccggctgcatcgtcttcaccgcccgcaacgagcaggttgacttgttgaagcctg 325 ||||||||||||||||| | ||||||||||||||||||||||||||| || ||||| ||| Sbjct: 244 acgagaccggctgcatcctgttcaccgcccgcaacgagcaggttgacctgatgaaggctg 303 Query: 326 acagcactgtcattatccgcaatgcaaagatcgatatgttcaaaggatcaatgaggcttg 385 |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 304 acagcactgttattatccgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttg 363 Query: 386 ctgtggacaaatgggggcgtgttgaagtcaccgaacctgcaagcttcaatgtaaaggagg 445 |||||||||||||||| || ||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 364 ctgtggacaaatggggccgcattgaagtgactgaaccggcaagtttcaacgtaaaggagg 423 Query: 446 acaacaatctgtcacttgtggagtatgaccttgtcaatgttg 487 | |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 424 ataacaatctctcacttgtggagtatgaacttgtcaatgttg 465 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/79 (88%), Gaps = 2/79 (2%) Strand = Plus / Plus Query: 677 tattagttgctgcagcggttgtggttgtaagaacaaatgtgatgt--gctgagcagttaa 734 |||||| ||||||||| |||||||||||||||||||||||||||| | ||| |||| || Sbjct: 659 tattaggtgctgcagcagttgtggttgtaagaacaaatgtgatgtgagatgatcagtcaa 718 Query: 735 tatgctggtgcattttgag 753 | ||||| ||||||||||| Sbjct: 719 tttgctgctgcattttgag 737 >dbj|AK067551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108H01, full insert sequence Length = 868 Score = 511 bits (258), Expect = e-141 Identities = 366/402 (91%) Strand = Plus / Plus Query: 86 cggcggcggcgaagcggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgt 145 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 cggcggcggcgaagaggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgg 124 Query: 146 ccggccacacgctcgtcgccaaggtgctcagctccaagaccgtcctccagaagggccgcg 205 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 125 gcggccacacgctcgtcgccaaggtgctcagctccaagaccgtggtccagaagggccgcg 184 Query: 206 ccggcgcgggcgctgaccccgcggcaaggctaacgagaatcgccgagtgcgtcatcggcg 265 ||| |||||| || | ||| ||||| | | ||||| |||||||||||| ||||||||| Sbjct: 185 ccgccgcgggagcgggcccggcggcgcgtcccacgaggatcgccgagtgcctcatcggcg 244 Query: 266 acgagaccggctgcatcgtcttcaccgcccgcaacgagcaggttgacttgttgaagcctg 325 ||||||||||||||||| | ||||||||||||||||||||||||||| || ||||| ||| Sbjct: 245 acgagaccggctgcatcctgttcaccgcccgcaacgagcaggttgacctgatgaaggctg 304 Query: 326 acagcactgtcattatccgcaatgcaaagatcgatatgttcaaaggatcaatgaggcttg 385 |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 305 acagcactgttattatccgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttg 364 Query: 386 ctgtggacaaatgggggcgtgttgaagtcaccgaacctgcaagcttcaatgtaaaggagg 445 |||||||||||||||| || ||||||| || ||||| ||||| ||||| |||||||||| Sbjct: 365 ctgtggacaaatggggccgcattgaagtgactgaaccggcaagtttcaacgtaaaggagg 424 Query: 446 acaacaatctgtcacttgtggagtatgaccttgtcaatgttg 487 | |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 425 ataacaatctctcacttgtggagtatgaacttgtcaatgttg 466 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/79 (88%), Gaps = 2/79 (2%) Strand = Plus / Plus Query: 677 tattagttgctgcagcggttgtggttgtaagaacaaatgtgatgt--gctgagcagttaa 734 |||||| ||||||||| |||||||||||||||||||||||||||| | ||| |||| || Sbjct: 660 tattaggtgctgcagcagttgtggttgtaagaacaaatgtgatgtgagatgatcagtcaa 719 Query: 735 tatgctggtgcattttgag 753 | ||||| ||||||||||| Sbjct: 720 tttgctgctgcattttgag 738 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 289 bits (146), Expect = 8e-75 Identities = 203/222 (91%) Strand = Plus / Minus Query: 86 cggcggcggcgaagcggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgt 145 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31633556 cggcggcggcgaagaggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgg 31633497 Query: 146 ccggccacacgctcgtcgccaaggtgctcagctccaagaccgtcctccagaagggccgcg 205 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 31633496 gcggccacacgctcgtcgccaaggtgctcagctccaagaccgtggtccagaagggccgcg 31633437 Query: 206 ccggcgcgggcgctgaccccgcggcaaggctaacgagaatcgccgagtgcgtcatcggcg 265 ||| |||||| || | ||| ||||| | | ||||| |||||||||||| ||||||||| Sbjct: 31633436 ccgccgcgggagcgggcccggcggcgcgtcccacgaggatcgccgagtgcctcatcggcg 31633377 Query: 266 acgagaccggctgcatcgtcttcaccgcccgcaacgagcagg 307 ||||||||||||||||| | |||||||||||||||||||||| Sbjct: 31633376 acgagaccggctgcatcctgttcaccgcccgcaacgagcagg 31633335 Score = 224 bits (113), Expect = 4e-55 Identities = 164/181 (90%) Strand = Plus / Minus Query: 307 gttgacttgttgaagcctgacagcactgtcattatccgcaatgcaaagatcgatatgttc 366 |||||| || ||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 31632428 gttgacctgatgaaggctgacagcactgttattatccgcaatgcaaaaattgatatgttc 31632369 Query: 367 aaaggatcaatgaggcttgctgtggacaaatgggggcgtgttgaagtcaccgaacctgca 426 ||||||||||||||||||||||||||||||||||| || ||||||| || ||||| ||| Sbjct: 31632368 aaaggatcaatgaggcttgctgtggacaaatggggccgcattgaagtgactgaaccggca 31632309 Query: 427 agcttcaatgtaaaggaggacaacaatctgtcacttgtggagtatgaccttgtcaatgtt 486 || ||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 31632308 agtttcaacgtaaaggaggataacaatctctcacttgtggagtatgaacttgtcaatgtt 31632249 Query: 487 g 487 | Sbjct: 31632248 g 31632248 Score = 101 bits (51), Expect = 4e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 343 cgcaatgcaaagatcgatatgttcaaaggatcaatgaggcttgctgtggacaaatggggg 402 |||||||| || ||||| ||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 7671294 cgcaatgccaaaatcgacatgttcaaaggctcaatgaggcttgcggtggacaagtggggg 7671353 Query: 403 cgtgttgaagtcaccgaacctgcaagcttcaatgtaaaggaggacaacaatctgtcactt 462 ||| | || | || |||||||| ||||| | ||| |||||||||||||| ||||||| Sbjct: 7671354 cgtatagaggctacagaacctgccagctttactgttaaggaggacaacaacttgtcacta 7671413 Query: 463 gtggagtatga 473 || |||||||| Sbjct: 7671414 gtagagtatga 7671424 Score = 91.7 bits (46), Expect = 4e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 244 atcgccgagtgcgtcatcggcgacgagaccggctgcatcgtcttcaccgcccgcaacgag 303 ||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 7669383 atcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaacgag 7669442 Query: 304 ca 305 || Sbjct: 7669443 ca 7669444 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/79 (88%), Gaps = 2/79 (2%) Strand = Plus / Minus Query: 677 tattagttgctgcagcggttgtggttgtaagaacaaatgtgatgt--gctgagcagttaa 734 |||||| ||||||||| |||||||||||||||||||||||||||| | ||| |||| || Sbjct: 31632054 tattaggtgctgcagcagttgtggttgtaagaacaaatgtgatgtgagatgatcagtcaa 31631995 Query: 735 tatgctggtgcattttgag 753 | ||||| ||||||||||| Sbjct: 31631994 tttgctgctgcattttgag 31631976 >dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 289 bits (146), Expect = 8e-75 Identities = 203/222 (91%) Strand = Plus / Minus Query: 86 cggcggcggcgaagcggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgt 145 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47288 cggcggcggcgaagaggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgg 47229 Query: 146 ccggccacacgctcgtcgccaaggtgctcagctccaagaccgtcctccagaagggccgcg 205 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 47228 gcggccacacgctcgtcgccaaggtgctcagctccaagaccgtggtccagaagggccgcg 47169 Query: 206 ccggcgcgggcgctgaccccgcggcaaggctaacgagaatcgccgagtgcgtcatcggcg 265 ||| |||||| || | ||| ||||| | | ||||| |||||||||||| ||||||||| Sbjct: 47168 ccgccgcgggagcgggcccggcggcgcgtcccacgaggatcgccgagtgcctcatcggcg 47109 Query: 266 acgagaccggctgcatcgtcttcaccgcccgcaacgagcagg 307 ||||||||||||||||| | |||||||||||||||||||||| Sbjct: 47108 acgagaccggctgcatcctgttcaccgcccgcaacgagcagg 47067 Score = 224 bits (113), Expect = 4e-55 Identities = 164/181 (90%) Strand = Plus / Minus Query: 307 gttgacttgttgaagcctgacagcactgtcattatccgcaatgcaaagatcgatatgttc 366 |||||| || ||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 46160 gttgacctgatgaaggctgacagcactgttattatccgcaatgcaaaaattgatatgttc 46101 Query: 367 aaaggatcaatgaggcttgctgtggacaaatgggggcgtgttgaagtcaccgaacctgca 426 ||||||||||||||||||||||||||||||||||| || ||||||| || ||||| ||| Sbjct: 46100 aaaggatcaatgaggcttgctgtggacaaatggggccgcattgaagtgactgaaccggca 46041 Query: 427 agcttcaatgtaaaggaggacaacaatctgtcacttgtggagtatgaccttgtcaatgtt 486 || ||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 46040 agtttcaacgtaaaggaggataacaatctctcacttgtggagtatgaacttgtcaatgtt 45981 Query: 487 g 487 | Sbjct: 45980 g 45980 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/79 (88%), Gaps = 2/79 (2%) Strand = Plus / Minus Query: 677 tattagttgctgcagcggttgtggttgtaagaacaaatgtgatgt--gctgagcagttaa 734 |||||| ||||||||| |||||||||||||||||||||||||||| | ||| |||| || Sbjct: 45786 tattaggtgctgcagcagttgtggttgtaagaacaaatgtgatgtgagatgatcagtcaa 45727 Query: 735 tatgctggtgcattttgag 753 | ||||| ||||||||||| Sbjct: 45726 tttgctgctgcattttgag 45708 >dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 289 bits (146), Expect = 8e-75 Identities = 203/222 (91%) Strand = Plus / Minus Query: 86 cggcggcggcgaagcggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgt 145 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146579 cggcggcggcgaagaggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgg 146520 Query: 146 ccggccacacgctcgtcgccaaggtgctcagctccaagaccgtcctccagaagggccgcg 205 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 146519 gcggccacacgctcgtcgccaaggtgctcagctccaagaccgtggtccagaagggccgcg 146460 Query: 206 ccggcgcgggcgctgaccccgcggcaaggctaacgagaatcgccgagtgcgtcatcggcg 265 ||| |||||| || | ||| ||||| | | ||||| |||||||||||| ||||||||| Sbjct: 146459 ccgccgcgggagcgggcccggcggcgcgtcccacgaggatcgccgagtgcctcatcggcg 146400 Query: 266 acgagaccggctgcatcgtcttcaccgcccgcaacgagcagg 307 ||||||||||||||||| | |||||||||||||||||||||| Sbjct: 146399 acgagaccggctgcatcctgttcaccgcccgcaacgagcagg 146358 Score = 224 bits (113), Expect = 4e-55 Identities = 164/181 (90%) Strand = Plus / Minus Query: 307 gttgacttgttgaagcctgacagcactgtcattatccgcaatgcaaagatcgatatgttc 366 |||||| || ||||| ||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 145451 gttgacctgatgaaggctgacagcactgttattatccgcaatgcaaaaattgatatgttc 145392 Query: 367 aaaggatcaatgaggcttgctgtggacaaatgggggcgtgttgaagtcaccgaacctgca 426 ||||||||||||||||||||||||||||||||||| || ||||||| || ||||| ||| Sbjct: 145391 aaaggatcaatgaggcttgctgtggacaaatggggccgcattgaagtgactgaaccggca 145332 Query: 427 agcttcaatgtaaaggaggacaacaatctgtcacttgtggagtatgaccttgtcaatgtt 486 || ||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct: 145331 agtttcaacgtaaaggaggataacaatctctcacttgtggagtatgaacttgtcaatgtt 145272 Query: 487 g 487 | Sbjct: 145271 g 145271 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/79 (88%), Gaps = 2/79 (2%) Strand = Plus / Minus Query: 677 tattagttgctgcagcggttgtggttgtaagaacaaatgtgatgt--gctgagcagttaa 734 |||||| ||||||||| |||||||||||||||||||||||||||| | ||| |||| || Sbjct: 145077 tattaggtgctgcagcagttgtggttgtaagaacaaatgtgatgtgagatgatcagtcaa 145018 Query: 735 tatgctggtgcattttgag 753 | ||||| ||||||||||| Sbjct: 145017 tttgctgctgcattttgag 144999