BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst020g04 (1419 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056409.1| Oryza sativa (japonica cultivar-group) Os03g... 329 2e-86 gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare str... 329 2e-86 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 329 2e-86 dbj|AK071041.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 2e-86 ref|NM_001074970.1| Oryza sativa (japonica cultivar-group) Os11g... 86 5e-13 >ref|NM_001056409.1| Oryza sativa (japonica cultivar-group) Os03g0303100 (Os03g0303100) mRNA, complete cds Length = 1574 Score = 329 bits (166), Expect = 2e-86 Identities = 291/334 (87%), Gaps = 9/334 (2%) Strand = Plus / Plus Query: 76 gcgccatggacgacgacatcgacagcacctgctccacccccttcgccagcgcgccctcca 135 ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 71 gcgccatggacgacgacatcgacagcagctgctccaccccattcgccagcgcgccgtcca 130 Query: 136 gccccggccgctcccccgccatctgcggcggcggtggcggctacttcttcagcgcgccgg 195 |||||||| | || || |||| | |||||| ||||||||||||||||||||| Sbjct: 131 gccccggcaggtcgcctgccaccggcggcg---------gctacttcttcagcgcgccgg 181 Query: 196 ccagccccatccaccaccttctgctatcgtcctcgtccggtgcatctggtcccgtgtccg 255 ||||||||||||||||||| || || || ||||| || | ||| || ||| ||||| | Sbjct: 182 ccagccccatccaccacctgctcctctcctcctcctcggttgcctccggtgtggtgtcgg 241 Query: 256 gcgcggggtacggtggcgtgggtgacgcggagttcgagttcggaggacccggcgggccca 315 | |||||||| || |||||||| || ||||||||||||||||| || ||||||||||||| Sbjct: 242 gggcggggtatggcggcgtgggcgatgcggagttcgagttcggcggccccggcgggccca 301 Query: 316 tgatctcggccgaccagctcttccacaacggccagatccggccgctcaccctgcccccac 375 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 302 tgatctccgccgacgagctcttccacaacggccagatccggccgctcaccctgcccccgc 361 Query: 376 tcccagatctcgaccccagcagcgacgacgacga 409 |||| |||||||||||| |||||||||||||||| Sbjct: 362 tcccggatctcgaccccggcagcgacgacgacga 395 Score = 242 bits (122), Expect = 3e-60 Identities = 179/198 (90%) Strand = Plus / Plus Query: 964 ggcggcgctcgacgacggcggcggcggcgcacgagaggctctacgcggcgccgaacaggg 1023 |||||||||||| |||| ||||||||||||||| | ||||||||||||| |||| ||| Sbjct: 950 ggcggcgctcgagcacggtcgcggcggcgcacgagcgtctctacgcggcgcggaaccggg 1009 Query: 1024 ctttggcggaggagatgcggcggcggacgttcctgccgtacaggcagggcctcctcggct 1083 | ||||||||||||||||||||| |||||||| || ||| |||||||||||||||||| Sbjct: 1010 cgcaggcggaggagatgcggcggcgcacgttcctcccctaccggcagggcctcctcggct 1069 Query: 1084 gcctcggcttcaactcccgcggctacggcgcgctccacgggttcaccaaaaccctcaacc 1143 |||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 1070 gcctcggcttcagctcccgcggttacggcgcgctccacggcttcacaaaaaccctcaacc 1129 Query: 1144 ccgtcttctcccggtaaa 1161 |||||||||||||||||| Sbjct: 1130 ccgtcttctcccggtaaa 1147 Score = 220 bits (111), Expect = 1e-53 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 570 cactcggctggggcgcaggaggccgcgccgctggtcaccgcctcgtcgcgctcgtcctcg 629 |||||||||||| || |||||||| |||| | ||||||||||||||| ||||||||||| Sbjct: 574 cactcggctgggtcggaggaggccacgccaccggtcaccgcctcgtcacgctcgtcctcc 633 Query: 630 tcctcctcgacatcgtcatcctcgtcctcctcgtcgtccgtccgcgggtcccggcggtgg 689 ||||||||||| || || |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 634 tcctcctcgacgtcctcgtcctcgtcctcctcgtcgtccgcccgcgggtcacggcggtgg 693 Query: 690 gtgttcctcaaggacatgctcctcctccaccgcagcaagagcgagcctggcagcgctcac 749 |||||||||||||||||| |||||||||||||||||||||||||| ||| | || ||| Sbjct: 694 gtgttcctcaaggacatg---ctcctccaccgcagcaagagcgagccaggcggagcccac 750 Query: 750 gcacacgacgctcccgc 766 || |||||||| ||||| Sbjct: 751 gcgcacgacgcccccgc 767 Score = 168 bits (85), Expect = 4e-38 Identities = 127/141 (90%) Strand = Plus / Plus Query: 419 ccgccccgcgccggcacgaggccgcgagctcatgctccggagcggctccgtgcaccgccg 478 |||||||| ||||| |||||||||||||| | ||| |||||||| |||||||||||||| Sbjct: 414 ccgccccgggccggtgcgaggccgcgagctgacgctgcggagcgggtccgtgcaccgccg 473 Query: 479 cacccggtccttgtccccgctccgcagcgcgtccccgcggttgaagctgctcaatgcgct 538 ||| |||||| |||| ||||||||| |||||||||||||| | ||||||||||||||||| Sbjct: 474 cacgcggtccatgtcgccgctccgcggcgcgtccccgcggctcaagctgctcaatgcgct 533 Query: 539 cgtccccgcgccggatcttgg 559 ||||||||| ||||||||||| Sbjct: 534 cgtccccgccccggatcttgg 554 >gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 329 bits (166), Expect = 2e-86 Identities = 291/334 (87%), Gaps = 9/334 (2%) Strand = Plus / Plus Query: 76 gcgccatggacgacgacatcgacagcacctgctccacccccttcgccagcgcgccctcca 135 ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 81302 gcgccatggacgacgacatcgacagcagctgctccaccccattcgccagcgcgccgtcca 81361 Query: 136 gccccggccgctcccccgccatctgcggcggcggtggcggctacttcttcagcgcgccgg 195 |||||||| | || || |||| | |||||| ||||||||||||||||||||| Sbjct: 81362 gccccggcaggtcgcctgccaccggcggcg---------gctacttcttcagcgcgccgg 81412 Query: 196 ccagccccatccaccaccttctgctatcgtcctcgtccggtgcatctggtcccgtgtccg 255 ||||||||||||||||||| || || || ||||| || | ||| || ||| ||||| | Sbjct: 81413 ccagccccatccaccacctgctcctctcctcctcctcggttgcctccggtgtggtgtcgg 81472 Query: 256 gcgcggggtacggtggcgtgggtgacgcggagttcgagttcggaggacccggcgggccca 315 | |||||||| || |||||||| || ||||||||||||||||| || ||||||||||||| Sbjct: 81473 gggcggggtatggcggcgtgggcgatgcggagttcgagttcggcggccccggcgggccca 81532 Query: 316 tgatctcggccgaccagctcttccacaacggccagatccggccgctcaccctgcccccac 375 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 81533 tgatctccgccgacgagctcttccacaacggccagatccggccgctcaccctgcccccgc 81592 Query: 376 tcccagatctcgaccccagcagcgacgacgacga 409 |||| |||||||||||| |||||||||||||||| Sbjct: 81593 tcccggatctcgaccccggcagcgacgacgacga 81626 Score = 242 bits (122), Expect = 3e-60 Identities = 179/198 (90%) Strand = Plus / Plus Query: 964 ggcggcgctcgacgacggcggcggcggcgcacgagaggctctacgcggcgccgaacaggg 1023 |||||||||||| |||| ||||||||||||||| | ||||||||||||| |||| ||| Sbjct: 82181 ggcggcgctcgagcacggtcgcggcggcgcacgagcgtctctacgcggcgcggaaccggg 82240 Query: 1024 ctttggcggaggagatgcggcggcggacgttcctgccgtacaggcagggcctcctcggct 1083 | ||||||||||||||||||||| |||||||| || ||| |||||||||||||||||| Sbjct: 82241 cgcaggcggaggagatgcggcggcgcacgttcctcccctaccggcagggcctcctcggct 82300 Query: 1084 gcctcggcttcaactcccgcggctacggcgcgctccacgggttcaccaaaaccctcaacc 1143 |||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 82301 gcctcggcttcagctcccgcggttacggcgcgctccacggcttcacaaaaaccctcaacc 82360 Query: 1144 ccgtcttctcccggtaaa 1161 |||||||||||||||||| Sbjct: 82361 ccgtcttctcccggtaaa 82378 Score = 220 bits (111), Expect = 1e-53 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 570 cactcggctggggcgcaggaggccgcgccgctggtcaccgcctcgtcgcgctcgtcctcg 629 |||||||||||| || |||||||| |||| | ||||||||||||||| ||||||||||| Sbjct: 81805 cactcggctgggtcggaggaggccacgccaccggtcaccgcctcgtcacgctcgtcctcc 81864 Query: 630 tcctcctcgacatcgtcatcctcgtcctcctcgtcgtccgtccgcgggtcccggcggtgg 689 ||||||||||| || || |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 81865 tcctcctcgacgtcctcgtcctcgtcctcctcgtcgtccgcccgcgggtcacggcggtgg 81924 Query: 690 gtgttcctcaaggacatgctcctcctccaccgcagcaagagcgagcctggcagcgctcac 749 |||||||||||||||||| |||||||||||||||||||||||||| ||| | || ||| Sbjct: 81925 gtgttcctcaaggacatg---ctcctccaccgcagcaagagcgagccaggcggagcccac 81981 Query: 750 gcacacgacgctcccgc 766 || |||||||| ||||| Sbjct: 81982 gcgcacgacgcccccgc 81998 Score = 168 bits (85), Expect = 4e-38 Identities = 127/141 (90%) Strand = Plus / Plus Query: 419 ccgccccgcgccggcacgaggccgcgagctcatgctccggagcggctccgtgcaccgccg 478 |||||||| ||||| |||||||||||||| | ||| |||||||| |||||||||||||| Sbjct: 81645 ccgccccgggccggtgcgaggccgcgagctgacgctgcggagcgggtccgtgcaccgccg 81704 Query: 479 cacccggtccttgtccccgctccgcagcgcgtccccgcggttgaagctgctcaatgcgct 538 ||| |||||| |||| ||||||||| |||||||||||||| | ||||||||||||||||| Sbjct: 81705 cacgcggtccatgtcgccgctccgcggcgcgtccccgcggctcaagctgctcaatgcgct 81764 Query: 539 cgtccccgcgccggatcttgg 559 ||||||||| ||||||||||| Sbjct: 81765 cgtccccgccccggatcttgg 81785 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 329 bits (166), Expect = 2e-86 Identities = 291/334 (87%), Gaps = 9/334 (2%) Strand = Plus / Plus Query: 76 gcgccatggacgacgacatcgacagcacctgctccacccccttcgccagcgcgccctcca 135 ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 10662489 gcgccatggacgacgacatcgacagcagctgctccaccccattcgccagcgcgccgtcca 10662548 Query: 136 gccccggccgctcccccgccatctgcggcggcggtggcggctacttcttcagcgcgccgg 195 |||||||| | || || |||| | |||||| ||||||||||||||||||||| Sbjct: 10662549 gccccggcaggtcgcctgccaccggcggcg---------gctacttcttcagcgcgccgg 10662599 Query: 196 ccagccccatccaccaccttctgctatcgtcctcgtccggtgcatctggtcccgtgtccg 255 ||||||||||||||||||| || || || ||||| || | ||| || ||| ||||| | Sbjct: 10662600 ccagccccatccaccacctgctcctctcctcctcctcggttgcctccggtgtggtgtcgg 10662659 Query: 256 gcgcggggtacggtggcgtgggtgacgcggagttcgagttcggaggacccggcgggccca 315 | |||||||| || |||||||| || ||||||||||||||||| || ||||||||||||| Sbjct: 10662660 gggcggggtatggcggcgtgggcgatgcggagttcgagttcggcggccccggcgggccca 10662719 Query: 316 tgatctcggccgaccagctcttccacaacggccagatccggccgctcaccctgcccccac 375 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10662720 tgatctccgccgacgagctcttccacaacggccagatccggccgctcaccctgcccccgc 10662779 Query: 376 tcccagatctcgaccccagcagcgacgacgacga 409 |||| |||||||||||| |||||||||||||||| Sbjct: 10662780 tcccggatctcgaccccggcagcgacgacgacga 10662813 Score = 242 bits (122), Expect = 3e-60 Identities = 179/198 (90%) Strand = Plus / Plus Query: 964 ggcggcgctcgacgacggcggcggcggcgcacgagaggctctacgcggcgccgaacaggg 1023 |||||||||||| |||| ||||||||||||||| | ||||||||||||| |||| ||| Sbjct: 10663368 ggcggcgctcgagcacggtcgcggcggcgcacgagcgtctctacgcggcgcggaaccggg 10663427 Query: 1024 ctttggcggaggagatgcggcggcggacgttcctgccgtacaggcagggcctcctcggct 1083 | ||||||||||||||||||||| |||||||| || ||| |||||||||||||||||| Sbjct: 10663428 cgcaggcggaggagatgcggcggcgcacgttcctcccctaccggcagggcctcctcggct 10663487 Query: 1084 gcctcggcttcaactcccgcggctacggcgcgctccacgggttcaccaaaaccctcaacc 1143 |||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 10663488 gcctcggcttcagctcccgcggttacggcgcgctccacggcttcacaaaaaccctcaacc 10663547 Query: 1144 ccgtcttctcccggtaaa 1161 |||||||||||||||||| Sbjct: 10663548 ccgtcttctcccggtaaa 10663565 Score = 220 bits (111), Expect = 1e-53 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 570 cactcggctggggcgcaggaggccgcgccgctggtcaccgcctcgtcgcgctcgtcctcg 629 |||||||||||| || |||||||| |||| | ||||||||||||||| ||||||||||| Sbjct: 10662992 cactcggctgggtcggaggaggccacgccaccggtcaccgcctcgtcacgctcgtcctcc 10663051 Query: 630 tcctcctcgacatcgtcatcctcgtcctcctcgtcgtccgtccgcgggtcccggcggtgg 689 ||||||||||| || || |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 10663052 tcctcctcgacgtcctcgtcctcgtcctcctcgtcgtccgcccgcgggtcacggcggtgg 10663111 Query: 690 gtgttcctcaaggacatgctcctcctccaccgcagcaagagcgagcctggcagcgctcac 749 |||||||||||||||||| |||||||||||||||||||||||||| ||| | || ||| Sbjct: 10663112 gtgttcctcaaggacatg---ctcctccaccgcagcaagagcgagccaggcggagcccac 10663168 Query: 750 gcacacgacgctcccgc 766 || |||||||| ||||| Sbjct: 10663169 gcgcacgacgcccccgc 10663185 Score = 168 bits (85), Expect = 4e-38 Identities = 127/141 (90%) Strand = Plus / Plus Query: 419 ccgccccgcgccggcacgaggccgcgagctcatgctccggagcggctccgtgcaccgccg 478 |||||||| ||||| |||||||||||||| | ||| |||||||| |||||||||||||| Sbjct: 10662832 ccgccccgggccggtgcgaggccgcgagctgacgctgcggagcgggtccgtgcaccgccg 10662891 Query: 479 cacccggtccttgtccccgctccgcagcgcgtccccgcggttgaagctgctcaatgcgct 538 ||| |||||| |||| ||||||||| |||||||||||||| | ||||||||||||||||| Sbjct: 10662892 cacgcggtccatgtcgccgctccgcggcgcgtccccgcggctcaagctgctcaatgcgct 10662951 Query: 539 cgtccccgcgccggatcttgg 559 ||||||||| ||||||||||| Sbjct: 10662952 cgtccccgccccggatcttgg 10662972 >dbj|AK071041.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F02, full insert sequence Length = 1575 Score = 329 bits (166), Expect = 2e-86 Identities = 291/334 (87%), Gaps = 9/334 (2%) Strand = Plus / Plus Query: 76 gcgccatggacgacgacatcgacagcacctgctccacccccttcgccagcgcgccctcca 135 ||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct: 72 gcgccatggacgacgacatcgacagcagctgctccaccccattcgccagcgcgccgtcca 131 Query: 136 gccccggccgctcccccgccatctgcggcggcggtggcggctacttcttcagcgcgccgg 195 |||||||| | || || |||| | |||||| ||||||||||||||||||||| Sbjct: 132 gccccggcaggtcgcctgccaccggcggcg---------gctacttcttcagcgcgccgg 182 Query: 196 ccagccccatccaccaccttctgctatcgtcctcgtccggtgcatctggtcccgtgtccg 255 ||||||||||||||||||| || || || ||||| || | ||| || ||| ||||| | Sbjct: 183 ccagccccatccaccacctgctcctctcctcctcctcggttgcctccggtgtggtgtcgg 242 Query: 256 gcgcggggtacggtggcgtgggtgacgcggagttcgagttcggaggacccggcgggccca 315 | |||||||| || |||||||| || ||||||||||||||||| || ||||||||||||| Sbjct: 243 gggcggggtatggcggcgtgggcgatgcggagttcgagttcggcggccccggcgggccca 302 Query: 316 tgatctcggccgaccagctcttccacaacggccagatccggccgctcaccctgcccccac 375 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 303 tgatctccgccgacgagctcttccacaacggccagatccggccgctcaccctgcccccgc 362 Query: 376 tcccagatctcgaccccagcagcgacgacgacga 409 |||| |||||||||||| |||||||||||||||| Sbjct: 363 tcccggatctcgaccccggcagcgacgacgacga 396 Score = 242 bits (122), Expect = 3e-60 Identities = 179/198 (90%) Strand = Plus / Plus Query: 964 ggcggcgctcgacgacggcggcggcggcgcacgagaggctctacgcggcgccgaacaggg 1023 |||||||||||| |||| ||||||||||||||| | ||||||||||||| |||| ||| Sbjct: 951 ggcggcgctcgagcacggtcgcggcggcgcacgagcgtctctacgcggcgcggaaccggg 1010 Query: 1024 ctttggcggaggagatgcggcggcggacgttcctgccgtacaggcagggcctcctcggct 1083 | ||||||||||||||||||||| |||||||| || ||| |||||||||||||||||| Sbjct: 1011 cgcaggcggaggagatgcggcggcgcacgttcctcccctaccggcagggcctcctcggct 1070 Query: 1084 gcctcggcttcaactcccgcggctacggcgcgctccacgggttcaccaaaaccctcaacc 1143 |||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 1071 gcctcggcttcagctcccgcggttacggcgcgctccacggcttcacaaaaaccctcaacc 1130 Query: 1144 ccgtcttctcccggtaaa 1161 |||||||||||||||||| Sbjct: 1131 ccgtcttctcccggtaaa 1148 Score = 220 bits (111), Expect = 1e-53 Identities = 176/197 (89%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 570 cactcggctggggcgcaggaggccgcgccgctggtcaccgcctcgtcgcgctcgtcctcg 629 |||||||||||| || |||||||| |||| | ||||||||||||||| ||||||||||| Sbjct: 575 cactcggctgggtcggaggaggccacgccaccggtcaccgcctcgtcacgctcgtcctcc 634 Query: 630 tcctcctcgacatcgtcatcctcgtcctcctcgtcgtccgtccgcgggtcccggcggtgg 689 ||||||||||| || || |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 635 tcctcctcgacgtcctcgtcctcgtcctcctcgtcgtccgcccgcgggtcacggcggtgg 694 Query: 690 gtgttcctcaaggacatgctcctcctccaccgcagcaagagcgagcctggcagcgctcac 749 |||||||||||||||||| |||||||||||||||||||||||||| ||| | || ||| Sbjct: 695 gtgttcctcaaggacatg---ctcctccaccgcagcaagagcgagccaggcggagcccac 751 Query: 750 gcacacgacgctcccgc 766 || |||||||| ||||| Sbjct: 752 gcgcacgacgcccccgc 768 Score = 168 bits (85), Expect = 4e-38 Identities = 127/141 (90%) Strand = Plus / Plus Query: 419 ccgccccgcgccggcacgaggccgcgagctcatgctccggagcggctccgtgcaccgccg 478 |||||||| ||||| |||||||||||||| | ||| |||||||| |||||||||||||| Sbjct: 415 ccgccccgggccggtgcgaggccgcgagctgacgctgcggagcgggtccgtgcaccgccg 474 Query: 479 cacccggtccttgtccccgctccgcagcgcgtccccgcggttgaagctgctcaatgcgct 538 ||| |||||| |||| ||||||||| |||||||||||||| | ||||||||||||||||| Sbjct: 475 cacgcggtccatgtcgccgctccgcggcgcgtccccgcggctcaagctgctcaatgcgct 534 Query: 539 cgtccccgcgccggatcttgg 559 ||||||||| ||||||||||| Sbjct: 535 cgtccccgccccggatcttgg 555 >ref|NM_001074970.1| Oryza sativa (japonica cultivar-group) Os11g0672800 (Os11g0672800) mRNA, complete cds Length = 2386 Score = 85.7 bits (43), Expect = 5e-13 Identities = 87/102 (85%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 1028 ggcggaggagatgcggcggcggacgttcctgccgtacaggcaggg------cctcctcgg 1081 |||||||||||||||||||||||||| |||||||||| ||||||| |||| |||| Sbjct: 1242 ggcggaggagatgcggcggcggacgtacctgccgtaccggcaggggctcctcctcttcgg 1183 Query: 1082 ctgcctcggcttcaactcccgcggctacggcgcgctccacgg 1123 |||| ||||| || |||||||||||||||||| ||||||| Sbjct: 1182 ctgcatcggcctcggctcccgcggctacggcgccgtccacgg 1141