BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst020a14 (622 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK243552.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 440 e-120 ref|NM_001074186.1| Oryza sativa (japonica cultivar-group) Os11g... 438 e-119 emb|CT835669.1| Oryza sativa (indica cultivar-group) cDNA clone:... 434 e-118 gb|AY105890.1| Zea mays PCO111077 mRNA sequence 254 4e-64 gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome... 212 1e-51 >dbj|AK243552.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100079I22, full insert sequence Length = 1329 Score = 440 bits (222), Expect = e-120 Identities = 306/334 (91%) Strand = Plus / Plus Query: 1 tatggttctgttggtggatgccaatatccccggccattgaaagtaccatcagaatggaca 60 |||||||||||||| || ||| ||||||||| ||| ||||| | |||||| | ||| | Sbjct: 620 tatggttctgttggcgggtgcacatatccccgtccagtgaaaatgccatcaaagtgggta 679 Query: 61 ttcaattcatacactgttctgaagaccgctgaacaagcaccaagaactccatcgtttgta 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 680 ttcaattcatacactgttctgaagacttctgaacaagcaccaagaactccatcatttgta 739 Query: 121 gatcagttaatagagtctgaaaatggacttggtgaagtggtgaaaccacctgagaagtct 180 |||||||||||||| | |||||||| |||||||||||||||||| |||||||||||||| Sbjct: 740 gatcagttaatagaagccgaaaatggtcttggtgaagtggtgaaatcacctgagaagtct 799 Query: 181 ttctgggctaaatattggatgtacatgattcctcttggtctcattgtcatgaatgctgtc 240 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 800 ttctgggctaaatattggatgtacatcattcctcttggtctcattgtcatgaatgctgtc 859 Query: 241 acggcagcagcaaacatgccagaggagcaagctggagggcagggtcaacctggagcacaa 300 ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 860 acggcagcagcgaacatgccggaggagcaagctggagggcagggccaacctggagctcaa 919 Query: 301 agggcgccgaatgctgctcccaggagaagatgat 334 ||||| || ||||||||||| ||||||||||||| Sbjct: 920 agggcaccaaatgctgctccaaggagaagatgat 953 >ref|NM_001074186.1| Oryza sativa (japonica cultivar-group) Os11g0264600 (Os11g0264600) mRNA, complete cds Length = 897 Score = 438 bits (221), Expect = e-119 Identities = 305/333 (91%) Strand = Plus / Plus Query: 1 tatggttctgttggtggatgccaatatccccggccattgaaagtaccatcagaatggaca 60 |||||||||||||| || ||| ||||||||| ||| ||||| | |||||| | ||| | Sbjct: 565 tatggttctgttggcgggtgcacatatccccgtccagtgaaaatgccatcaaagtgggta 624 Query: 61 ttcaattcatacactgttctgaagaccgctgaacaagcaccaagaactccatcgtttgta 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 625 ttcaattcatacactgttctgaagacttctgaacaagcaccaagaactccatcatttgta 684 Query: 121 gatcagttaatagagtctgaaaatggacttggtgaagtggtgaaaccacctgagaagtct 180 |||||||||||||| | |||||||| |||||||||||||||||| |||||||||||||| Sbjct: 685 gatcagttaatagaagccgaaaatggtcttggtgaagtggtgaaatcacctgagaagtct 744 Query: 181 ttctgggctaaatattggatgtacatgattcctcttggtctcattgtcatgaatgctgtc 240 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ttctgggctaaatattggatgtacatcattcctcttggtctcattgtcatgaatgctgtc 804 Query: 241 acggcagcagcaaacatgccagaggagcaagctggagggcagggtcaacctggagcacaa 300 ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 805 acggcagcagcgaacatgccggaggagcaagctggagggcagggccaacctggagctcaa 864 Query: 301 agggcgccgaatgctgctcccaggagaagatga 333 ||||| || ||||||||||| |||||||||||| Sbjct: 865 agggcaccaaatgctgctccaaggagaagatga 897 >emb|CT835669.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA123F14, full insert sequence Length = 1321 Score = 434 bits (219), Expect = e-118 Identities = 307/335 (91%), Gaps = 1/335 (0%) Strand = Plus / Plus Query: 1 tatggttctgttggtggatgccaatatccccggccattgaaagtaccatcagaa-tggac 59 |||||||||||||| || ||| ||||||||| ||| ||||| | ||||| || ||| Sbjct: 610 tatggttctgttggcgggtgcacatatccccgtccagtgaaaatgccatccaaagtgggt 669 Query: 60 attcaattcatacactgttctgaagaccgctgaacaagcaccaagaactccatcgtttgt 119 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 670 attcaattcatacactgttctgaagacttctgaacaagcaccaagaactccatcatttgt 729 Query: 120 agatcagttaatagagtctgaaaatggacttggtgaagtggtgaaaccacctgagaagtc 179 ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 730 agatcagttaatagaagctgaaaatggtcttggtgaagtggtgaaatcacctgagaagtc 789 Query: 180 tttctgggctaaatattggatgtacatgattcctcttggtctcattgtcatgaatgctgt 239 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 790 tttctgggctaaatattggatgtacatcattcctcttggtctcattgtcatgaatgctgt 849 Query: 240 cacggcagcagcaaacatgccagaggagcaagctggagggcagggtcaacctggagcaca 299 |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 850 cacggcagcagcgaacatgccggaggagcaagctggagggcagggccaacctggagctca 909 Query: 300 aagggcgccgaatgctgctcccaggagaagatgat 334 |||||| || ||||||||||| ||||||||||||| Sbjct: 910 aagggcaccaaatgctgctccaaggagaagatgat 944 >gb|AY105890.1| Zea mays PCO111077 mRNA sequence Length = 1356 Score = 254 bits (128), Expect = 4e-64 Identities = 263/306 (85%), Gaps = 4/306 (1%) Strand = Plus / Plus Query: 1 tatggttctgttggtggatgccaatatccccggccattgaaagtaccatcagaatggaca 60 ||||| ||||||| ||| |||||||| || |||| ||||| | |||||| |||||||| Sbjct: 688 tatggctctgttgatgggtgccaataccctaggcctatgaaattgccatcaaaatggaca 747 Query: 61 ttcaattcatacactgttctgaagaccgctgaacaagcaccaagaactccatcgtttgta 120 |||| || |||||| | || ||||| |||||||| ||||||||||| |||||||||| | Sbjct: 748 ttcagctcttacactatcctaaagactgctgaacaggcaccaagaaccccatcgtttgca 807 Query: 121 gatcagttaatagagtctgaaaatggacttggtgaagtggtgaaaccacctgagaagtct 180 |||||||||||||| |||| ||||| ||||| ||||| |||||||||||||||| ||| Sbjct: 808 gatcagttaatagaagctgacaatggtcttggcgaagtaatgaaaccacctgagaaatct 867 Query: 181 ttctgggctaaatattggatgtacatgattcctcttggtctcattgtcatgaatgctgtc 240 |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 868 ttctgggctaaatattggatgtacatcattccgcttggtcttattgtcatgaatgctgtt 927 Query: 241 ac-ggcagcagcaaacatgccagaggagcaagctggagggcagggtcaacctggagcaca 299 || |||||| || ||||| ||||||| |||||| ||||||||| |||||||||||||| Sbjct: 928 acgggcagctgccaacataccagagg---aagctgcagggcagggccaacctggagcaca 984 Query: 300 aagggc 305 | |||| Sbjct: 985 acgggc 990 >gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 212 bits (107), Expect = 1e-51 Identities = 131/139 (94%) Strand = Plus / Minus Query: 196 tggatgtacatgattcctcttggtctcattgtcatgaatgctgtcacggcagcagcaaac 255 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 112478 tggatgtacatcattcctcttggtctcattgtcatgaatgctgtcacggcagcagcgaac 112419 Query: 256 atgccagaggagcaagctggagggcagggtcaacctggagcacaaagggcgccgaatgct 315 ||||| ||||||||||||||||||||||| ||||||||||| |||||||| || |||||| Sbjct: 112418 atgccggaggagcaagctggagggcagggccaacctggagctcaaagggcaccaaatgct 112359 Query: 316 gctcccaggagaagatgat 334 ||||| ||||||||||||| Sbjct: 112358 gctccaaggagaagatgat 112340 Score = 137 bits (69), Expect = 6e-29 Identities = 87/93 (93%) Strand = Plus / Minus Query: 103 agaactccatcgtttgtagatcagttaatagagtctgaaaatggacttggtgaagtggtg 162 ||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||| Sbjct: 112647 agaactccatcatttgtagatcagttaatagaagccgaaaatggtcttggtgaagtggtg 112588 Query: 163 aaaccacctgagaagtctttctgggctaaatat 195 ||| ||||||||||||||||||||||||||||| Sbjct: 112587 aaatcacctgagaagtctttctgggctaaatat 112555