BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst019n04 (668 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY109089.1| Zea mays PCO082815 mRNA sequence 240 6e-60 emb|CT830472.1| Oryza sativa (indica cultivar-group) cDNA clone:... 182 1e-42 ref|NM_001070509.1| Oryza sativa (japonica cultivar-group) Os09g... 182 1e-42 dbj|AB029060.2| Oryza sativa (japonica cultivar-group) OsIF1-2 m... 182 1e-42 gb|AY108128.1| Zea mays PCO082816 mRNA sequence 167 7e-38 >gb|AY109089.1| Zea mays PCO082815 mRNA sequence Length = 876 Score = 240 bits (121), Expect = 6e-60 Identities = 293/349 (83%), Gaps = 1/349 (0%) Strand = Plus / Plus Query: 115 ggcggcggcgaggttcgtgcagcgcaggctccgatcctccggtggcaaggtctttggcga 174 |||||||||||||||| ||||||||||| | | || ||||| ||||||||| | |||| Sbjct: 135 ggcggcggcgaggttcctgcagcgcaggtttctgtcttccggcggcaaggtcctcagcga 194 Query: 175 ggaagagaaggccgccgagaacttctacatcaagaacatggaacaagacaagctggagat 234 ||| |||||||||||||||||| | ||||||||||| |||||||||| |||||||||| Sbjct: 195 ggaggagaaggccgccgagaacgtgtacatcaagaaagtggaacaagagaagctggagaa 254 Query: 235 gctcgcacgcaagggccccagcccaggagagcaagcttcaccaaccccaagctctgcagc 294 |||||||||||||||||||||| ||||||||||| | || ||||| || |||||||||| Sbjct: 255 gctcgcacgcaagggccccagctcaggagagcaaccctcgtcaaccacaggctctgcagc 314 Query: 295 aagtgatgcgaaaactgcaggcggcccaacggaatcacccatctgttggtgtgtcgaccg 354 |||||||| ||| | | | || |||||||| ||| |||||| |||||||||| | Sbjct: 315 aagtgatgtgaaggccgatgctgggccaacggagtca-gcatctgcaagtgtgtcgacgg 373 Query: 355 acaagaacaggaactacgctgtcctggcaggcacagttgctgccgtgagtgccgtgggtt 414 ||||||||| |||||| ||||| ||||||||| ||||||||||| || ||| | |||||| Sbjct: 374 acaagaacaagaactatgctgttctggcaggcgcagttgctgccctgggtggcttgggtt 433 Query: 415 ggtacctcctgtcgaagcctaagaagtcggaagaggtggtggagtgaag 463 |||| || ||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 434 ggtatctattgttaaagcctaagaagtcggaggaggttgtggactgaag 482 >emb|CT830472.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN079G12, full insert sequence Length = 552 Score = 182 bits (92), Expect = 1e-42 Identities = 161/184 (87%) Strand = Plus / Plus Query: 91 ggcggcggccaggactccggccatggcggcggcgaggttcgtgcagcgcaggctccgatc 150 ||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||| || Sbjct: 67 ggcggcggctagggctccatccagggcggcggcgaggttcgtgcagcgcaggctcttttc 126 Query: 151 ctccggtggcaaggtctttggcgaggaagagaaggccgccgagaacttctacatcaagaa 210 |||||| |||||||| | |||||||| |||||||||||||||||| ||||||||||||| Sbjct: 127 ctccggcggcaaggtgctcggcgaggaggagaaggccgccgagaacgtctacatcaagaa 186 Query: 211 catggaacaagacaagctggagatgctcgcacgcaagggccccagcccaggagagcaagc 270 |||||||| || |||||||||| | | || | ||||||||||| ||||||||||||||| Sbjct: 187 aatggaacacgagaagctggagaagttggcccacaagggccccaacccaggagagcaagc 246 Query: 271 ttca 274 |||| Sbjct: 247 ttca 250 Score = 111 bits (56), Expect = 4e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 335 atctgttggtgtgtcgaccgacaagaacaggaactacgctgtcctggcaggcacagttgc 394 ||||| ||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 307 atctgctggtgtgtcaactgacaaaaacaggaactatgctgtcctggcaggcactgttgc 366 Query: 395 tgccgtgagtgccgtgggttggtacctcctgtcgaagcctaagaagtcggaagaggtggt 454 ||| |||||| | |||| ||||| ||| |||| |||||||||||||| ||||| | || Sbjct: 367 tgctttgagtggcctggggtggtatctcttgtcaaagcctaagaagtctgaagatatagt 426 Query: 455 ggagtgaaggttgtgaatgggatc 478 ||| ||||||| || |||| |||| Sbjct: 427 ggactgaaggtggttaatgagatc 450 >ref|NM_001070509.1| Oryza sativa (japonica cultivar-group) Os09g0568900 (Os09g0568900) mRNA, complete cds Length = 764 Score = 182 bits (92), Expect = 1e-42 Identities = 161/184 (87%) Strand = Plus / Plus Query: 91 ggcggcggccaggactccggccatggcggcggcgaggttcgtgcagcgcaggctccgatc 150 ||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||| || Sbjct: 94 ggcggcggctagggctccatccagggcggcggcgaggttcgtgcagcgcaggctcttttc 153 Query: 151 ctccggtggcaaggtctttggcgaggaagagaaggccgccgagaacttctacatcaagaa 210 |||||| |||||||| | |||||||| |||||||||||||||||| ||||||||||||| Sbjct: 154 ctccggcggcaaggtgctcggcgaggaggagaaggccgccgagaacgtctacatcaagaa 213 Query: 211 catggaacaagacaagctggagatgctcgcacgcaagggccccagcccaggagagcaagc 270 |||||||| || |||||||||| | | || | ||||||||||| ||||||||||||||| Sbjct: 214 aatggaacacgagaagctggagaagttggcccacaagggccccaacccaggagagcaagc 273 Query: 271 ttca 274 |||| Sbjct: 274 ttca 277 Score = 111 bits (56), Expect = 4e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 335 atctgttggtgtgtcgaccgacaagaacaggaactacgctgtcctggcaggcacagttgc 394 ||||| ||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 334 atctgctggtgtgtcaactgacaaaaacaggaactatgctgtcctggcaggcactgttgc 393 Query: 395 tgccgtgagtgccgtgggttggtacctcctgtcgaagcctaagaagtcggaagaggtggt 454 ||| |||||| | |||| ||||| ||| |||| |||||||||||||| ||||| | || Sbjct: 394 tgctttgagtggcctggggtggtatctcttgtcaaagcctaagaagtctgaagatatagt 453 Query: 455 ggagtgaaggttgtgaatgggatc 478 ||| ||||||| || |||| |||| Sbjct: 454 ggactgaaggtggttaatgagatc 477 >dbj|AB029060.2| Oryza sativa (japonica cultivar-group) OsIF1-2 mRNA for F1F0-ATPase inhibitor protein, complete cds Length = 786 Score = 182 bits (92), Expect = 1e-42 Identities = 161/184 (87%) Strand = Plus / Plus Query: 91 ggcggcggccaggactccggccatggcggcggcgaggttcgtgcagcgcaggctccgatc 150 ||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||| || Sbjct: 94 ggcggcggctagggctccatccagggcggcggcgaggttcgtgcagcgcaggctcttttc 153 Query: 151 ctccggtggcaaggtctttggcgaggaagagaaggccgccgagaacttctacatcaagaa 210 |||||| |||||||| | |||||||| |||||||||||||||||| ||||||||||||| Sbjct: 154 ctccggcggcaaggtgctcggcgaggaggagaaggccgccgagaacgtctacatcaagaa 213 Query: 211 catggaacaagacaagctggagatgctcgcacgcaagggccccagcccaggagagcaagc 270 |||||||| || |||||||||| | | || | ||||||||||| ||||||||||||||| Sbjct: 214 aatggaacacgagaagctggagaagttggcccacaagggccccaacccaggagagcaagc 273 Query: 271 ttca 274 |||| Sbjct: 274 ttca 277 Score = 111 bits (56), Expect = 4e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 335 atctgttggtgtgtcgaccgacaagaacaggaactacgctgtcctggcaggcacagttgc 394 ||||| ||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 334 atctgctggtgtgtcaactgacaaaaacaggaactatgctgtcctggcaggcactgttgc 393 Query: 395 tgccgtgagtgccgtgggttggtacctcctgtcgaagcctaagaagtcggaagaggtggt 454 ||| |||||| | |||| ||||| ||| |||| |||||||||||||| ||||| | || Sbjct: 394 tgctttgagtggcctggggtggtatctcttgtcaaagcctaagaagtctgaagatatagt 453 Query: 455 ggagtgaaggttgtgaatgggatc 478 ||| ||||||| || |||| |||| Sbjct: 454 ggactgaaggtggttaatgagatc 477 >gb|AY108128.1| Zea mays PCO082816 mRNA sequence Length = 876 Score = 167 bits (84), Expect = 7e-38 Identities = 162/188 (86%) Strand = Plus / Plus Query: 115 ggcggcggcgaggttcgtgcagcgcaggctccgatcctccggtggcaaggtctttggcga 174 ||||||| |||| ||| ||||||||||||||| || ||||| ||||||||| | |||| Sbjct: 156 ggcggcgtcgagattcctgcagcgcaggctcctgtcttccggcggcaaggtcctcagcga 215 Query: 175 ggaagagaaggccgccgagaacttctacatcaagaacatggaacaagacaagctggagat 234 ||| ||||||||||| ||||| | ||||||||||| ||||||||||| |||||||||| Sbjct: 216 ggaggagaaggccgcggagaaagtgtacatcaagaaaatggaacaagagaagctggagaa 275 Query: 235 gctcgcacgcaagggccccagcccaggagagcaagcttcaccaaccccaagctctgcagc 294 |||||||||||||||||||||| |||||||||||||||| | || || ||||||||| Sbjct: 276 gctcgcacgcaagggccccagctcaggagagcaagcttcgtcgactacagtctctgcagc 335 Query: 295 aagtgatg 302 |||||||| Sbjct: 336 aagtgatg 343 Score = 133 bits (67), Expect = 1e-27 Identities = 106/119 (89%) Strand = Plus / Plus Query: 345 gtgtcgaccgacaagaacaggaactacgctgtcctggcaggcacagttgctgccgtgagt 404 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 385 gtgtcaaccgacaagaacaggaactacgctgtcctggcaggcacaattgctgctctgagt 444 Query: 405 gccgtgggttggtacctcctgtcgaagcctaagaagtcggaagaggtggtggagtgaag 463 | | |||||||||| || |||| ||||||||||||||||| ||||| ||||| ||||| Sbjct: 445 ggcctgggttggtatctattgtcaaagcctaagaagtcggaggaggttgtggactgaag 503