BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst019n03 (1272 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT831486.1| Oryza sativa (indica cultivar-group) cDNA clone:... 426 e-116 ref|NM_001057687.1| Oryza sativa (japonica cultivar-group) Os03g... 426 e-116 dbj|AK107548.1| Oryza sativa (japonica cultivar-group) cDNA clon... 426 e-116 gb|BT018964.1| Zea mays clone Contig339.F mRNA sequence 228 4e-56 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 161 9e-36 >emb|CT831486.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA044H02, full insert sequence Length = 1204 Score = 426 bits (215), Expect = e-116 Identities = 323/359 (89%) Strand = Plus / Plus Query: 303 ccgccgccgaggaccccgtcttcgtcggcgtcgccgacgacggcgtgcccctcgagggcg 362 ||||| |||||||||||||| |||||||||| | ||||| ||||| ||||||||||||| Sbjct: 360 ccgccaccgaggaccccgtcctcgtcggcgttacggacgagggcgtccccctcgagggcg 419 Query: 363 ttatctagattgagaagcccggcgaggccgccgccgagtccaagctcgtctcctacgcga 422 | ||| || | || ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 420 tcatccagttcgataagcccggcgacgccgccgccgagtccaagctcgtctcctacgcga 479 Query: 423 aggtggggcttttggccagtggagatttgctttgcctcctggtcttctccgcgataggaa 482 || |||||||| ||||||| || ||| |||| |||||||| ||||||||||||||||||| Sbjct: 480 agctggggcttctggccagcggcgatgtgctctgcctcctcgtcttctccgcgataggaa 539 Query: 483 ggttcagccatggtctgcccgttcttgacgccgagacgttcaagacggccgacccgttca 542 ||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || |||| Sbjct: 540 ggttcagccatgggctgcctgttcttgacgcggagacgttcaagacggccgatcccttca 599 Query: 543 ttgctgggtggttgctcagtgcctacctccttggtggatttggagatgatgtgaaaggac 602 ||||||| ||||||||||||||||| |||||||| ||||| || ||||||| |||||| | Sbjct: 600 ttgctggatggttgctcagtgcctatctccttggcggattcggggatgatgcgaaaggtc 659 Query: 603 gcaatggtgtggggaaagctgttgttgttgcggccaaatgctgggctgttgggataccg 661 ||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 660 gcaatggcgtggggaacgctgtagttgttgcggccaaatcctgggctgttgggataccg 718 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 117 gatgctgctggtgagccaggccgccaacggctccgtctccgcgcggcggctgccc 171 |||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 118 gatgttgctggtgagccaggccgccaatggttccgtctccgcgcggcggctgccc 172 >ref|NM_001057687.1| Oryza sativa (japonica cultivar-group) Os03g0729100 (Os03g0729100) mRNA, partial cds Length = 1731 Score = 426 bits (215), Expect = e-116 Identities = 323/359 (89%) Strand = Plus / Plus Query: 303 ccgccgccgaggaccccgtcttcgtcggcgtcgccgacgacggcgtgcccctcgagggcg 362 ||||| |||||||||||||| |||||||||| | ||||| ||||| ||||||||||||| Sbjct: 211 ccgccaccgaggaccccgtcctcgtcggcgttacggacgagggcgtccccctcgagggcg 270 Query: 363 ttatctagattgagaagcccggcgaggccgccgccgagtccaagctcgtctcctacgcga 422 | ||| || | || ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 271 tcatccagttcgataagcccggcgacgccgccgccgagtccaagctcgtctcctacgcga 330 Query: 423 aggtggggcttttggccagtggagatttgctttgcctcctggtcttctccgcgataggaa 482 || |||||||| ||||||| || ||| |||| |||||||| ||||||||||||||||||| Sbjct: 331 agctggggcttctggccagcggcgatgtgctctgcctcctcgtcttctccgcgataggaa 390 Query: 483 ggttcagccatggtctgcccgttcttgacgccgagacgttcaagacggccgacccgttca 542 ||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || |||| Sbjct: 391 ggttcagccatgggctgcctgttcttgacgcggagacgttcaagacggccgatcccttca 450 Query: 543 ttgctgggtggttgctcagtgcctacctccttggtggatttggagatgatgtgaaaggac 602 ||||||| ||||||||||||||||| |||||||| ||||| || ||||||| |||||| | Sbjct: 451 ttgctggatggttgctcagtgcctatctccttggcggattcggggatgatgcgaaaggtc 510 Query: 603 gcaatggtgtggggaaagctgttgttgttgcggccaaatgctgggctgttgggataccg 661 ||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 511 gcaatggcgtggggaacgctgtagttgttgcggccaaatcctgggctgttgggataccg 569 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 117 gatgctgctggtgagccaggccgccaacggctccgtctccgcgcggcggctgccc 171 |||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 121 gatgttgctggtgagccaggccgccaatggttccgtctccgcgcggcggctgccc 175 >dbj|AK107548.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-A06, full insert sequence Length = 1731 Score = 426 bits (215), Expect = e-116 Identities = 323/359 (89%) Strand = Plus / Plus Query: 303 ccgccgccgaggaccccgtcttcgtcggcgtcgccgacgacggcgtgcccctcgagggcg 362 ||||| |||||||||||||| |||||||||| | ||||| ||||| ||||||||||||| Sbjct: 211 ccgccaccgaggaccccgtcctcgtcggcgttacggacgagggcgtccccctcgagggcg 270 Query: 363 ttatctagattgagaagcccggcgaggccgccgccgagtccaagctcgtctcctacgcga 422 | ||| || | || ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 271 tcatccagttcgataagcccggcgacgccgccgccgagtccaagctcgtctcctacgcga 330 Query: 423 aggtggggcttttggccagtggagatttgctttgcctcctggtcttctccgcgataggaa 482 || |||||||| ||||||| || ||| |||| |||||||| ||||||||||||||||||| Sbjct: 331 agctggggcttctggccagcggcgatgtgctctgcctcctcgtcttctccgcgataggaa 390 Query: 483 ggttcagccatggtctgcccgttcttgacgccgagacgttcaagacggccgacccgttca 542 ||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || |||| Sbjct: 391 ggttcagccatgggctgcctgttcttgacgcggagacgttcaagacggccgatcccttca 450 Query: 543 ttgctgggtggttgctcagtgcctacctccttggtggatttggagatgatgtgaaaggac 602 ||||||| ||||||||||||||||| |||||||| ||||| || ||||||| |||||| | Sbjct: 451 ttgctggatggttgctcagtgcctatctccttggcggattcggggatgatgcgaaaggtc 510 Query: 603 gcaatggtgtggggaaagctgttgttgttgcggccaaatgctgggctgttgggataccg 661 ||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 511 gcaatggcgtggggaacgctgtagttgttgcggccaaatcctgggctgttgggataccg 569 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 117 gatgctgctggtgagccaggccgccaacggctccgtctccgcgcggcggctgccc 171 |||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 121 gatgttgctggtgagccaggccgccaatggttccgtctccgcgcggcggctgccc 175 >gb|BT018964.1| Zea mays clone Contig339.F mRNA sequence Length = 1233 Score = 228 bits (115), Expect = 4e-56 Identities = 259/307 (84%) Strand = Plus / Plus Query: 309 ccgaggaccccgtcttcgtcggcgtcgccgacgacggcgtgcccctcgagggcgttatct 368 |||||||||| ||| ||||| ||||||||||||| |||||||| ||||||||||| ||| Sbjct: 315 ccgaggacccggtcctcgtccgcgtcgccgacgaaggcgtgccgctcgagggcgtcatcc 374 Query: 369 agattgagaagcccggcgaggccgccgccgagtccaagctcgtctcctacgcgaaggtgg 428 |||||||||||||||| || || ||||||||||||||||||||||||||||||||| ||| Sbjct: 375 agattgagaagcccggggatgcggccgccgagtccaagctcgtctcctacgcgaagctgg 434 Query: 429 ggcttttggccagtggagatttgctttgcctcctggtcttctccgcgataggaaggttca 488 | ||| ||||| | || || || | ||||| ||| | ||||| ||||| |||||| ||| Sbjct: 435 gtcttctggccggcggggacgtgttctgccttctgctgttctctgcgattggaagggtca 494 Query: 489 gccatggtctgcccgttcttgacgccgagacgttcaagacggccgacccgttcattgctg 548 ||||||| |||||||| || ||| ||||||||||||||||||||||||| || ||||||| Sbjct: 495 gccatggcctgcccgtcctcgaccccgagacgttcaagacggccgacccctttattgctg 554 Query: 549 ggtggttgctcagtgcctacctccttggtggatttggagatgatgtgaaaggacgcaatg 608 || || || | || |||| ||| |||| |||||||| || |||| ||||| ||||| | Sbjct: 555 ggggggtgttgagcgcctccctttttgggggatttggggaggatgccaaagggcgcaagg 614 Query: 609 gtgtggg 615 | ||||| Sbjct: 615 gggtggg 621 Score = 91.7 bits (46), Expect = 7e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 197 ccaacccctaccccctcttcgccaacccccgcctcccgcgccgccgcctcgcgctctccg 256 ||||||||||||| |||||||||||||| ||||||| |||||||||||| |||||||||| Sbjct: 177 ccaacccctacccgctcttcgccaaccctcgcctcctgcgccgccgcctggcgctctccg 236 Query: 257 gc 258 || Sbjct: 237 gc 238 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 161 bits (81), Expect = 9e-36 Identities = 117/129 (90%) Strand = Plus / Minus Query: 421 gaaggtggggcttttggccagtggagatttgctttgcctcctggtcttctccgcgatagg 480 |||| |||||||| ||||||| || ||| |||| |||||||| ||||||||||||||||| Sbjct: 29589782 gaagctggggcttctggccagcggcgatgtgctctgcctcctcgtcttctccgcgatagg 29589723 Query: 481 aaggttcagccatggtctgcccgttcttgacgccgagacgttcaagacggccgacccgtt 540 ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| || || Sbjct: 29589722 aaggttcagccatgggctgcctgttcttgacgcggagacgttcaagacggccgatccctt 29589663 Query: 541 cattgctgg 549 ||||||||| Sbjct: 29589662 cattgctgg 29589654 Score = 143 bits (72), Expect = 2e-30 Identities = 102/112 (91%) Strand = Plus / Minus Query: 551 tggttgctcagtgcctacctccttggtggatttggagatgatgtgaaaggacgcaatggt 610 ||||||||||||||||| |||||||| ||||| || ||||||| |||||| |||||||| Sbjct: 29589571 tggttgctcagtgcctatctccttggcggattcggggatgatgcgaaaggtcgcaatggc 29589512 Query: 611 gtggggaaagctgttgttgttgcggccaaatgctgggctgttgggataccgg 662 |||||||| ||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 29589511 gtggggaacgctgtagttgttgcggccaaatcctgggctgttgggataccgg 29589460 Score = 133 bits (67), Expect = 2e-27 Identities = 106/119 (89%) Strand = Plus / Minus Query: 303 ccgccgccgaggaccccgtcttcgtcggcgtcgccgacgacggcgtgcccctcgagggcg 362 ||||| |||||||||||||| |||||||||| | ||||| ||||| ||||||||||||| Sbjct: 29589992 ccgccaccgaggaccccgtcctcgtcggcgttacggacgagggcgtccccctcgagggcg 29589933 Query: 363 ttatctagattgagaagcccggcgaggccgccgccgagtccaagctcgtctcctacgcg 421 | ||| || | || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 29589932 tcatccagttcgataagcccggcgacgccgccgccgagtccaagctcgtctcctacgcg 29589874 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 117 gatgctgctggtgagccaggccgccaacggctccgtctccgcgcggcggctgccc 171 |||| |||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 29590234 gatgttgctggtgagccaggccgccaatggttccgtctccgcgcggcggctgccc 29590180