BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst019j13 (937 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY952317.1| Triticum aestivum cultivar 7269-10 immature spike... 478 e-131 gb|DQ245541.1| Zea mays clone 16859 mRNA sequence 446 e-122 gb|AY104017.1| Zea mays PCO119482 mRNA sequence 430 e-117 gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UB... 430 e-117 gb|BT016331.1| Zea mays clone Contig164 mRNA sequence 422 e-114 >gb|AY952317.1| Triticum aestivum cultivar 7269-10 immature spike ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 853 Score = 478 bits (241), Expect = e-131 Identities = 321/345 (93%), Gaps = 2/345 (0%) Strand = Plus / Plus Query: 85 tcctcgccgtccccaacctctcgctgcaaaagga-gcttatcatggcttcaaagcgtatc 143 ||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||| ||| Sbjct: 100 tcctcgccgtccc-aacctctcgctgcaaaaggttgcttgtcatggcatcaaagcgcatc 158 Query: 144 ctcaaggaactgaaggacctgcagaaagatcctcccacatcatgcagtgcaggtcctgct 203 ||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 159 ctcaaggaactcaaggacctgcagaaggacccgcccacatcatgcagtgcaggtcctgct 218 Query: 204 ggtgaggacatgtttcattggcaagcaacaattatgggaccgcctgacagtccctatgct 263 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 219 ggtgaggacatgtttcattggcaagcaacaattatgggaccccctgacggtccctatgcc 278 Query: 264 ggtggtgttttcttagtgaacattcatttccccccagattacccgttcaaacccccaaag 323 || ||||||||||||||||||||||||||||| || |||||||| ||||| || |||||| Sbjct: 279 ggcggtgttttcttagtgaacattcatttccctccggattaccccttcaagccaccaaag 338 Query: 324 gtatctttcaaaacaaaggtcttccatcctaatatcaatagcaatggaagcatatgcctc 383 |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 339 gtatcttttaagacaaaggtcttccatcctaatatcaacagcaatggaagcatatgcctt 398 Query: 384 gatattcttaaggaacagtggagccctgctttgacgatctctaag 428 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 399 gatattcttaaggagcagtggagccctgctttgacgatctctaag 443 Score = 163 bits (82), Expect = 2e-36 Identities = 130/146 (89%) Strand = Plus / Plus Query: 533 aggtcttgctctcaatctgctccctgctgactgatcccaacccggacgatcctcttgtcc 592 ||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| | Sbjct: 442 aggtcttgctctctatctgttccctgctgaccgatcccaacccggatgatccccttgttc 501 Query: 593 ctgagattgcccacatgtacaaaactgaccggccgaagtacgaggggacagctcgcagct 652 | |||||||||||||||||||| || |||||| | ||||| ||| |||||| ||||||| Sbjct: 502 ccgagattgcccacatgtacaagacggaccggtcaaagtatgagacgacagcccgcagct 561 Query: 653 ggacacagaagtacgccatgggttga 678 |||| ||||||||||||||||||||| Sbjct: 562 ggacgcagaagtacgccatgggttga 587 >gb|DQ245541.1| Zea mays clone 16859 mRNA sequence Length = 844 Score = 446 bits (225), Expect = e-122 Identities = 294/317 (92%) Strand = Plus / Plus Query: 112 aaaaggagcttatcatggcttcaaagcgtatcctcaaggaactgaaggacctgcagaaag 171 |||||||| || ||||||| || ||||| ||||||||||| ||||||||||||||||||| Sbjct: 131 aaaaggagtttgtcatggcgtctaagcgcatcctcaaggagctgaaggacctgcagaaag 190 Query: 172 atcctcccacatcatgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaa 231 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 acccccccacatcatgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaa 250 Query: 232 caattatgggaccgcctgacagtccctatgctggtggtgttttcttagtgaacattcatt 291 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 caattatgggaccacctgacagtccctatgctggtggtgttttcttagtgaacattcatt 310 Query: 292 tccccccagattacccgttcaaacccccaaaggtatctttcaaaacaaaggtcttccatc 351 |||| ||||||||||| |||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 311 tcccgccagattaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatc 370 Query: 352 ctaatatcaatagcaatggaagcatatgcctcgatattcttaaggaacagtggagccctg 411 |||||||||| ||||||||||| |||||||| || ||||| || || ||||||||||||| Sbjct: 371 ctaatatcaacagcaatggaagtatatgccttgacattctcaaagagcagtggagccctg 430 Query: 412 ctttgacgatctctaag 428 ||||||| || |||||| Sbjct: 431 ctttgacaatttctaag 447 Score = 170 bits (86), Expect = 6e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 533 aggtcttgctctcaatctgctccctgctgactgatcccaacccggacgatcctcttgtcc 592 ||||| ||||||| ||||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 446 aggtcctgctctccatctgctccctgctgaccgaccccaacccggacgaccctcttgtcc 505 Query: 593 ctgagattgcccacatgtacaaaactgaccggccgaagtacgaggggacagctcgcagct 652 | |||||||||||||||||||| || |||||||||||||||||| ||| || ||||||| Sbjct: 506 cggagattgcccacatgtacaagacggaccggccgaagtacgagtcgacggcccgcagct 565 Query: 653 ggacacagaagtacgccatggg 674 |||| ||||||||||| ||||| Sbjct: 566 ggacgcagaagtacgcgatggg 587 >gb|AY104017.1| Zea mays PCO119482 mRNA sequence Length = 885 Score = 430 bits (217), Expect = e-117 Identities = 292/317 (92%) Strand = Plus / Plus Query: 112 aaaaggagcttatcatggcttcaaagcgtatcctcaaggaactgaaggacctgcagaaag 171 |||||||| || ||||||| || ||||| ||||||||||| ||||||||||||||||||| Sbjct: 124 aaaaggagtttgtcatggcgtctaagcgcatcctcaaggagctgaaggacctgcagaaag 183 Query: 172 atcctcccacatcatgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaa 231 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 acccccccacatcatgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaa 243 Query: 232 caattatgggaccgcctgacagtccctatgctggtggtgttttcttagtgaacattcatt 291 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 244 caattatgggaccacctgacagtccctatgctggcggtgttttcttagtgaacattcatt 303 Query: 292 tccccccagattacccgttcaaacccccaaaggtatctttcaaaacaaaggtcttccatc 351 |||| ||||||||||| |||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 304 tcccgccagattaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatc 363 Query: 352 ctaatatcaatagcaatggaagcatatgcctcgatattcttaaggaacagtggagccctg 411 |||||||||| ||||||||||| |||||||| || ||||| || || ||||||||||||| Sbjct: 364 ctaatatcaacagcaatggaagtatatgccttgacattctcaaagagcagtggagccctg 423 Query: 412 ctttgacgatctctaag 428 || |||| || |||||| Sbjct: 424 ctctgacaatttctaag 440 Score = 170 bits (86), Expect = 6e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 533 aggtcttgctctcaatctgctccctgctgactgatcccaacccggacgatcctcttgtcc 592 ||||| ||||||| ||||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 439 aggtcctgctctccatctgctccctgctgaccgaccccaacccggacgaccctcttgtcc 498 Query: 593 ctgagattgcccacatgtacaaaactgaccggccgaagtacgaggggacagctcgcagct 652 | |||||||||||||||||||| || |||||||||||||||||| ||| || ||||||| Sbjct: 499 cggagattgcccacatgtacaagacggaccggccgaagtacgagtcgacggcccgcagct 558 Query: 653 ggacacagaagtacgccatggg 674 |||| ||||||||||| ||||| Sbjct: 559 ggacgcagaagtacgcgatggg 580 >gb|AF034946.1|AF034946 Zea mays ubiquitin conjugating enzyme (UBC) mRNA, complete cds Length = 781 Score = 430 bits (217), Expect = e-117 Identities = 292/317 (92%) Strand = Plus / Plus Query: 112 aaaaggagcttatcatggcttcaaagcgtatcctcaaggaactgaaggacctgcagaaag 171 |||||||| || ||||||| || ||||| ||||||||||| ||||||||||||||||| | Sbjct: 27 aaaaggagtttgtcatggcgtctaagcgcatcctcaaggagctgaaggacctgcagaagg 86 Query: 172 atcctcccacatcatgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaa 231 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 acccccccacatcatgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaa 146 Query: 232 caattatgggaccgcctgacagtccctatgctggtggtgttttcttagtgaacattcatt 291 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 147 caattatgggaccacctgacagtccctatgctggtggtgtttttttagtgaacattcatt 206 Query: 292 tccccccagattacccgttcaaacccccaaaggtatctttcaaaacaaaggtcttccatc 351 |||| ||||||||||| |||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 207 tcccgccagattaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatc 266 Query: 352 ctaatatcaatagcaatggaagcatatgcctcgatattcttaaggaacagtggagccctg 411 |||||||||| ||||||||||| |||||||| || ||||| || || ||||||||||||| Sbjct: 267 ctaatatcaacagcaatggaagtatatgccttgacattctcaaagagcagtggagccctg 326 Query: 412 ctttgacgatctctaag 428 ||||||| || |||||| Sbjct: 327 ctttgacaatttctaag 343 Score = 170 bits (86), Expect = 6e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 533 aggtcttgctctcaatctgctccctgctgactgatcccaacccggacgatcctcttgtcc 592 ||||| ||||||| ||||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 342 aggtcctgctctccatctgctccctgctgaccgaccccaacccggacgaccctcttgtcc 401 Query: 593 ctgagattgcccacatgtacaaaactgaccggccgaagtacgaggggacagctcgcagct 652 | |||||||||||||||||||| || |||||||||||||||||| ||| || ||||||| Sbjct: 402 cggagattgcccacatgtacaagacggaccggccgaagtacgagtcgacggcccgcagct 461 Query: 653 ggacacagaagtacgccatggg 674 |||| ||||||||||| ||||| Sbjct: 462 ggacgcagaagtacgcgatggg 483 >gb|BT016331.1| Zea mays clone Contig164 mRNA sequence Length = 860 Score = 422 bits (213), Expect = e-114 Identities = 291/317 (91%) Strand = Plus / Plus Query: 112 aaaaggagcttatcatggcttcaaagcgtatcctcaaggaactgaaggacctgcagaaag 171 |||||||| || ||||||| || ||||| ||||||||||| ||||||||||||||||| | Sbjct: 87 aaaaggagtttgtcatggcgtctaagcgcatcctcaaggagctgaaggacctgcagaagg 146 Query: 172 atcctcccacatcatgcagtgcaggtcctgctggtgaggacatgtttcattggcaagcaa 231 | || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 147 acccccccacatcatgcagtgcaggtgctgctggtgaggacatgtttcattggcaagcaa 206 Query: 232 caattatgggaccgcctgacagtccctatgctggtggtgttttcttagtgaacattcatt 291 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 207 caattatgggaccacctgacagtccctatgctggtggtgtttttttagtgaacattcatt 266 Query: 292 tccccccagattacccgttcaaacccccaaaggtatctttcaaaacaaaggtcttccatc 351 |||| ||||||||||| |||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 267 tcccgccagattaccccttcaaacctccaaaggtttctttcaagacaaaggtcttccatc 326 Query: 352 ctaatatcaatagcaatggaagcatatgcctcgatattcttaaggaacagtggagccctg 411 |||||||||| ||||||||||| |||||||| || ||||| || || ||||||||||||| Sbjct: 327 ctaatatcaacagcaatggaagtatatgccttgacattctcaaagagcagtggagccctg 386 Query: 412 ctttgacgatctctaag 428 ||||||| || |||||| Sbjct: 387 ctttgacaatttctaag 403 Score = 170 bits (86), Expect = 6e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 533 aggtcttgctctcaatctgctccctgctgactgatcccaacccggacgatcctcttgtcc 592 ||||| ||||||| ||||||||||||||||| || |||||||||||||| |||||||||| Sbjct: 402 aggtcctgctctccatctgctccctgctgaccgaccccaacccggacgaccctcttgtcc 461 Query: 593 ctgagattgcccacatgtacaaaactgaccggccgaagtacgaggggacagctcgcagct 652 | |||||||||||||||||||| || |||||||||||||||||| ||| || ||||||| Sbjct: 462 cggagattgcccacatgtacaagacggaccggccgaagtacgagtcgacggcccgcagct 521 Query: 653 ggacacagaagtacgccatggg 674 |||| ||||||||||| ||||| Sbjct: 522 ggacgcagaagtacgcgatggg 543