BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst019f01
         (996 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|AJ890017.1| Triticum aestivum partial mRNA for putative leuc...   105   3e-19
ref|NM_001062444.1| Oryza sativa (japonica cultivar-group) Os05g...    94   1e-15
dbj|AK107986.1| Oryza sativa (japonica cultivar-group) cDNA clon...    94   1e-15
gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome...    86   3e-13
gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL03...    86   3e-13

>emb|AJ890017.1| Triticum aestivum partial mRNA for putative leucine-rich repeat
           protein (lrr gene), cultivar Wyuna, from endosperm
           tissue
          Length = 659

 Score =  105 bits (53), Expect = 3e-19
 Identities = 185/229 (80%)
 Strand = Plus / Plus

                                                                       
Query: 153 cggcgaacctagacggcgacgcgctcacggccctgaggaacgggctccacgaccccgacg 212
           |||||||||  ||||  ||||||||| ||||||||||||  || || || |||||| | |
Sbjct: 11  cggcgaaccaggacgtggacgcgctctcggccctgaggagaggcctacaggaccccaatg 70

                                                                       
Query: 213 gccagctgcagagctgggacccgaacctggtggacccctgcacctggttacgcgtgacct 272
           || || || ||| ||||||| |||||||||||||| ||||||||||||  | | | ||||
Sbjct: 71  gcgagttgaagaactgggacgcgaacctggtggacgcctgcacctggtcccacatcacct 130

                                                                       
Query: 273 gcaacgacgacaccaagcgcgtcacaagaatagatattggccacttgaacttgtccggtc 332
           || ||  ||| | ||| ||||||||  | |||||| ||  | |  ||||| ||||||| |
Sbjct: 131 gcgaccgcgataacaatcgcgtcacccgcatagatcttaacaaaatgaacctgtccggac 190

                                                            
Query: 333 gtctggcgcccgagcttgggaaactggaccagctacaatatatggaaat 381
            ||||||||| ||||||||||||||||||| |||||||||| |||||||
Sbjct: 191 ctctggcgccggagcttgggaaactggaccggctacaatatttggaaat 239


>ref|NM_001062444.1| Oryza sativa (japonica cultivar-group) Os05g0491400 (Os05g0491400)
           mRNA, complete cds
          Length = 951

 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 280/355 (78%), Gaps = 2/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 318 tgaacttgtccggtcgtctggcgcccgagcttgggaaactggaccagctacaatatatgg 377
           ||||| ||||||| | |||| || |||| |||| |  ||||||||||||||||| |||||
Sbjct: 309 tgaacctgtccggccatctgtcggccgatcttgcgcgactggaccagctacaatttatgg 368

                                                                       
Query: 378 aaattgagaggaacaatattcaaggaacaatcccatcagagtttggtaatttgaaaaatc 437
           |||| |    |||||||||| ||||| |||| ||  |||||||||||||| || | ||| 
Sbjct: 369 aaatcgcttcgaacaatattgaaggaccaattccgccagagtttggtaatctggagaatt 428

                                                                       
Query: 438 tgatcagcctggacttgtccgaaaactccatttcagggactattcctccatcacttggga 497
           |||| ||||| ||||||| | | ||| ||||||| ||| | || ||||| || |||||||
Sbjct: 429 tgattagcctagacttgtgcaacaacaccatttctgggccgatacctccgtcgcttggga 488

                                                                       
Query: 498 aactgaagtccctgaaaatcatg-caattgtatcgcaacagtttaacagggccaatccca 556
           |||| |||||| | ||| |||||  ||||| ||| ||||  |||||| ||||||||||||
Sbjct: 489 aactcaagtccttaaaattcatgagaattg-atcacaaccttttaactgggccaatccca 547

                                                                       
Query: 557 agggaactggttggactgtccaacctgaaagttttagatctctcaaacaatgatctttgt 616
           |  || |||| ||| ||||| ||||| |   |  || || | || ||||| ||||| |||
Sbjct: 548 aacgagctggctgggctgtcaaacctcatgatcctaaatgtatccaacaacgatctctgt 607

                                                                  
Query: 617 ggaacaattccgacatccggaccattcaagaacatgcctccgagcagctttgcca 671
           || ||||| ||||| ||||| || ||| |  || | |||||||||||||||||||
Sbjct: 608 gggacaatcccgacgtccgggccgttcgatcacttccctccgagcagctttgcca 662



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 202 cgaccccgacggccagctgcagagctgggacccgaacctggtggacccctgcacctggtt 261
           |||||||||||||  ||||  ||||||||||||  |||||||| ||||||||||||||||
Sbjct: 196 cgaccccgacggcgcgctggcgagctgggaccccgacctggtgaacccctgcacctggtt 255

                                  
Query: 262 acgcgtgacctgcaacgacgaca 284
            ||||| |||||||||| |||||
Sbjct: 256 ccgcgtcacctgcaacgccgaca 278


>dbj|AK107986.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F01, full
           insert sequence
          Length = 959

 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 280/355 (78%), Gaps = 2/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 318 tgaacttgtccggtcgtctggcgcccgagcttgggaaactggaccagctacaatatatgg 377
           ||||| ||||||||| |||| || |||| |||| |  ||||||||||||||||| |||||
Sbjct: 317 tgaacctgtccggtcatctgtcggccgatcttgcgcgactggaccagctacaatttatgg 376

                                                                       
Query: 378 aaattgagaggaacaatattcaaggaacaatcccatcagagtttggtaatttgaaaaatc 437
           |||| |    |||||||||| ||||| |||| ||  |||||||||||||| || | ||| 
Sbjct: 377 aaatcgcttcgaacaatattgaaggaccaattccgccagagtttggtaatctggagaatt 436

                                                                       
Query: 438 tgatcagcctggacttgtccgaaaactccatttcagggactattcctccatcacttggga 497
           |||| ||||| ||||||| | | ||| ||||||| ||| | || ||||| || |||||||
Sbjct: 437 tgattagcctagacttgtgcaacaacaccatttctgggccgatacctccgtcgcttggga 496

                                                                       
Query: 498 aactgaagtccctgaaaatcatg-caattgtatcgcaacagtttaacagggccaatccca 556
           |||| | |||| | ||| |||||  ||||| ||| ||||  |||||| ||||||||||||
Sbjct: 497 aactcaggtccttaaaattcatgagaattg-atcacaaccttttaactgggccaatccca 555

                                                                       
Query: 557 agggaactggttggactgtccaacctgaaagttttagatctctcaaacaatgatctttgt 616
           |  || |||| ||| ||||| ||||| |   |  || || | || ||||| ||||| |||
Sbjct: 556 aacgagctggctgggctgtcaaacctcatgatcctaaatgtatccaacaacgatctctgt 615

                                                                  
Query: 617 ggaacaattccgacatccggaccattcaagaacatgcctccgagcagctttgcca 671
           || ||||| ||||| ||||| || ||| |  || | |||||||||||||||||||
Sbjct: 616 gggacaatcccgacgtccgggccgttcgatcacttccctccgagcagctttgcca 670



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 202 cgaccccgacggccagctgcagagctgggacccgaacctggtggacccctgcacctggtt 261
           |||||||||||||  ||||  ||||||||||||  |||||||| ||||||||||||||||
Sbjct: 204 cgaccccgacggcgcgctggcgagctgggaccccgacctggtgaacccctgcacctggtt 263

                                  
Query: 262 acgcgtgacctgcaacgacgaca 284
            ||||| |||||||||| |||||
Sbjct: 264 ccgcgtcacctgcaacgccgaca 286


>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088I06, complete sequence
          Length = 187651

 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 202   cgaccccgacggccagctgcagagctgggacccgaacctggtggacccctgcacctggtt 261
             |||||||||||||  ||||  ||||||||||||  |||||||| ||||||||||||||||
Sbjct: 74644 cgaccccgacggcgcgctggcgagctgggaccccgacctggtgaacccctgcacctggtt 74585

                                    
Query: 262   acgcgtgacctgcaacgacgaca 284
              ||||| |||||||||| |||||
Sbjct: 74584 ccgcgtcacctgcaacgccgaca 74562


>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene
            region
          Length = 58956

 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                        
Query: 202  cgaccccgacggccagctgcagagctgggacccgaacctggtggacccctgcacctggtt 261
            |||||||||||||  ||||  ||||||||||||  |||||||| ||||||||||||||||
Sbjct: 6244 cgaccccgacggcgcgctggcgagctgggaccccgacctggtgaacccctgcacctggtt 6303

                                   
Query: 262  acgcgtgacctgcaacgacgaca 284
             ||||| |||||||||| |||||
Sbjct: 6304 ccgcgtcacctgcaacgccgaca 6326