BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018m20 (1228 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060900.1| Oryza sativa (japonica cultivar-group) Os04g... 498 e-137 dbj|AK102150.1| Oryza sativa (japonica cultivar-group) cDNA clon... 490 e-135 emb|AM502859.1| Hordeum vulgare subsp. vulgare partial mRNA for ... 391 e-105 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 184 6e-43 emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4,... 184 6e-43 >ref|NM_001060900.1| Oryza sativa (japonica cultivar-group) Os04g0692100 (Os04g0692100) mRNA, complete cds Length = 1126 Score = 498 bits (251), Expect = e-137 Identities = 424/481 (88%), Gaps = 3/481 (0%) Strand = Plus / Plus Query: 588 ggtaccggctgcatattattgatcttgatccttcgtcggtgacctctggtggttggttgg 647 ||||||| ||||| ||||| ||||| ||||||||||| | ||||||||||||||||||| Sbjct: 326 ggtaccgtctgcacattatcgatctcgatccttcgtcaatcacctctggtggttggttgg 385 Query: 648 aagatacttcacttgtcgacaagtacacgatttcagatgaagcgtacaacaagcttgaca 707 | |||||||| ||||| || |||||||| || ||||||||||| || || || ||||| | Sbjct: 386 aggatacttcccttgttgaaaagtacaccatctcagatgaagcatataataatcttgata 445 Query: 708 ctaactttcgaaaattcaaagaaaagatggtgtcgaaaaaccctacatcagatgacaaag 767 | |||||||||||||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 446 caaactttcgaaaattcaaagaaaagatggcctttaaaaaccctacgtcagatgataaac 505 Query: 768 aacag---tcagacaagcatacggaggaattgtgtgccaacatcaaggtgggagatagat 824 |||| || |||||||||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 506 aacaacaatctgacaagcatatggaggaattgtgcgccaacatcaaggtgggtgatagat 565 Query: 825 gtgaagttgagccaggtgccaagaggggcactgtaaaatttgttggcagagccgaagccc 884 ||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| | Sbjct: 566 gtgaagtcgagccaggtgctaagaggggtactgtaaaatttgttggcagagctgaagctc 625 Query: 885 ttggacgtggatttttggttggagtgcaatacgatgagccactgggaaagcacgatggca 944 ||||||||||||||| ||||||||| ||||| ||||| ||||| |||||||| ||||||| Sbjct: 626 ttggacgtggattttgggttggagtccaatatgatgaaccacttggaaagcatgatggca 685 Query: 945 tggtgaaaggtattcgcttcttcgagtgccctcaagggcatggagcaattgttaggccag 1004 |||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 686 tggtgaaaggcattcgctttttcgagtgtcctcaagggcatggagctattgttaggccag 745 Query: 1005 ggaaagtaaaggttggcgacttcccagagagagacccatttgaagaagaggagatatagg 1064 |||||||||||| || |||| ||||||||| ||||| |||||||| |||||||| |||| Sbjct: 746 agaaagtaaaggtcggggactacccagagagggacccttttgaagaggaggagatctagg 805 Query: 1065 c 1065 | Sbjct: 806 c 806 Score = 313 bits (158), Expect = 9e-82 Identities = 239/266 (89%) Strand = Plus / Plus Query: 36 aatgtcgtcgtcgtcgtccaagctgcagctgccggcggacgacagcgtcctcctgctcgt 95 |||||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| | Sbjct: 63 aatgtcgtcgtcctcgtccaagctgcatctcccggctgacgacagcgtcctcctcctcct 122 Query: 96 cacgcactccaacctcaccaccttctcctccgacatccgcgtctcgctgcagaccaccgt 155 |||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 123 cacgcactccaacctctccaccttctcctccgacatccgcgtctccaagcagacctccgt 182 Query: 156 cgaggccctcaaggagaagctctggaggaagaccggcaccgccgtcgcctccatgcgcct 215 |||||| |||||||| ||||||||||||||||||||||| |||| |||| ||||||||| Sbjct: 183 cgaggcgctcaaggacaagctctggaggaagaccggcacatccgttgccttcatgcgcct 242 Query: 216 cgacctccgcgacgataccggcgccaagatcgccgacctcgaccacgacgccgcgcccct 275 | | ||||||||||| |||||||||| ||||||||||||||||||||| | ||| |||| Sbjct: 243 ccagctccgcgacgacaccggcgccatgatcgccgacctcgaccacgatgacgccaccct 302 Query: 276 cgcctcctactccccctacaacgggt 301 ||||||||||||||| ||| |||||| Sbjct: 303 cgcctcctactccccatacgacgggt 328 >dbj|AK102150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086D17, full insert sequence Length = 1128 Score = 490 bits (247), Expect = e-135 Identities = 423/481 (87%), Gaps = 3/481 (0%) Strand = Plus / Plus Query: 588 ggtaccggctgcatattattgatcttgatccttcgtcggtgacctctggtggttggttgg 647 ||||||| ||||| ||||| ||||| ||||||||||| | ||||||||||||||||||| Sbjct: 328 ggtaccgtctgcacattatcgatctcgatccttcgtcaatcacctctggtggttggttgg 387 Query: 648 aagatacttcacttgtcgacaagtacacgatttcagatgaagcgtacaacaagcttgaca 707 | |||||||| ||||| || |||||||| || ||||||||||| || || || ||||| | Sbjct: 388 aggatacttcccttgttgaaaagtacaccatctcagatgaagcatataataatcttgata 447 Query: 708 ctaactttcgaaaattcaaagaaaagatggtgtcgaaaaaccctacatcagatgacaaag 767 | |||||||||||||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 448 caaactttcgaaaattcaaagaaaagatggcctttaaaaaccctacgtcagatgataaac 507 Query: 768 aacag---tcagacaagcatacggaggaattgtgtgccaacatcaaggtgggagatagat 824 |||| || |||||||||| |||||||||||| ||| ||||||||||||| ||||||| Sbjct: 508 aacaacaatctgacaagcatatggaggaattgtgcgccgacatcaaggtgggtgatagat 567 Query: 825 gtgaagttgagccaggtgccaagaggggcactgtaaaatttgttggcagagccgaagccc 884 ||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| | Sbjct: 568 gtgaagtcgagccaggtgctaagaggggtactgtaaaatttgttggcagagctgaagctc 627 Query: 885 ttggacgtggatttttggttggagtgcaatacgatgagccactgggaaagcacgatggca 944 ||||||||||||||| ||||||||| ||||| ||||| ||||| |||||||| ||||||| Sbjct: 628 ttggacgtggattttgggttggagtccaatatgatgaaccacttggaaagcatgatggca 687 Query: 945 tggtgaaaggtattcgcttcttcgagtgccctcaagggcatggagcaattgttaggccag 1004 |||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 688 tggtgaaaggcattcgctttttcgagtgtcctcaagggcatggagctattgttaggccag 747 Query: 1005 ggaaagtaaaggttggcgacttcccagagagagacccatttgaagaagaggagatatagg 1064 |||||||||||| || |||| ||||||||| ||||| |||||||| |||||||| |||| Sbjct: 748 agaaagtaaaggtcggggactacccagagagggacccttttgaagaggaggagatctagg 807 Query: 1065 c 1065 | Sbjct: 808 c 808 Score = 313 bits (158), Expect = 9e-82 Identities = 239/266 (89%) Strand = Plus / Plus Query: 36 aatgtcgtcgtcgtcgtccaagctgcagctgccggcggacgacagcgtcctcctgctcgt 95 |||||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| | Sbjct: 65 aatgtcgtcgtcctcgtccaagctgcatctcccggctgacgacagcgtcctcctcctcct 124 Query: 96 cacgcactccaacctcaccaccttctcctccgacatccgcgtctcgctgcagaccaccgt 155 |||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 125 cacgcactccaacctctccaccttctcctccgacatccgcgtctccaagcagacctccgt 184 Query: 156 cgaggccctcaaggagaagctctggaggaagaccggcaccgccgtcgcctccatgcgcct 215 |||||| |||||||| ||||||||||||||||||||||| |||| |||| ||||||||| Sbjct: 185 cgaggcgctcaaggacaagctctggaggaagaccggcacatccgttgccttcatgcgcct 244 Query: 216 cgacctccgcgacgataccggcgccaagatcgccgacctcgaccacgacgccgcgcccct 275 | | ||||||||||| |||||||||| ||||||||||||||||||||| | ||| |||| Sbjct: 245 ccagctccgcgacgacaccggcgccatgatcgccgacctcgaccacgatgacgccaccct 304 Query: 276 cgcctcctactccccctacaacgggt 301 ||||||||||||||| ||| |||||| Sbjct: 305 cgcctcctactccccatacgacgggt 330 >emb|AM502859.1| Hordeum vulgare subsp. vulgare partial mRNA for tubulin folding cofactor B (tfc B gene) Length = 987 Score = 391 bits (197), Expect = e-105 Identities = 364/419 (86%), Gaps = 3/419 (0%) Strand = Plus / Plus Query: 623 tcggtgacctctggtggttggttggaagatacttcacttgtcgacaagtacacgatttca 682 ||||||||||| || || ||| ||||||| || || || ||||| |||||||| || || Sbjct: 260 tcggtgacctccggcgggtggctggaagacacctcgctcgtcgagaagtacaccatctcg 319 Query: 683 gatgaagcgtacaacaagcttgacactaactttcgaaaattcaaagaaaagatggtgtcg 742 || || ||||| ||||||| | ||| ||||| || || |||||||| ||||||||| || Sbjct: 320 gacgaggcgtatgacaagctcggcacaaacttccggaagttcaaagagaagatggtggcg 379 Query: 743 aaaaaccctacatcagatgacaaagaacagtcagacaagcatacggaggaattgtgtgcc 802 |||| | || ||| ||||| || ||||||||||| || | |||||||||||||||| Sbjct: 380 aaaaccactgtatcggatgataag---cagtcagacaatcagatggaggaattgtgtgcc 436 Query: 803 aacatcaaggtgggagatagatgtgaagttgagccaggtgccaagaggggcactgtaaaa 862 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 437 aacatcaaggtgggagatagatgtgaagtcgagccaggtgccaagaggggcaccgtgaaa 496 Query: 863 tttgttggcagagccgaagcccttggacgtggatttttggttggagtgcaatacgatgag 922 || || |||| ||| ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 497 ttcgtcggcaaagctgaagcccttgggcgtggattttgggttggagtgcaatacgatgag 556 Query: 923 ccactgggaaagcacgatggcatggtgaaaggtattcgcttcttcgagtgccctcaaggg 982 ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 557 ccacttggaaaacacgatggcatggtgaaaggagttcgcttcttcgagtgccctcaaggg 616 Query: 983 catggagcaattgttaggccagggaaagtaaaggttggcgacttcccagagagagaccc 1041 |||||||||||||||||||||| |||||| |||||||||||||| || ||||| ||||| Sbjct: 617 catggagcaattgttaggccagagaaagtgaaggttggcgactttccggagagggaccc 675 Score = 220 bits (111), Expect = 1e-53 Identities = 190/215 (88%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 88 ctgctcgtcacgcactccaacctcaccaccttctcctccgacatccgcgtctcgctgcag 147 |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||| Sbjct: 13 ctgcgcgtcacgcactccaacctcgccaccttcgcctccgacatccgcgtctcgcagcag 72 Query: 148 accaccgtcgaggccctcaaggagaagctctggaggaagac-cggcaccgccgtcgcctc 206 || ||||| ||||| |||||||||||||| |||| |||||| ||||| ||||| | ||| Sbjct: 73 acgaccgtggaggcgctcaaggagaagctgtggaagaagacatggcacggccgtgggctc 132 Query: 207 catgcgcctcgacctccgcgacgataccggcgccaagatcgccgacctcgaccacgacgc 266 |||||||||||| | ||| ||||| ||||||||| | ||||||||||||||| |||||| Sbjct: 133 catgcgcctcgagcgccgggacgaggccggcgccagggtcgccgacctcgaccgcgacgc 192 Query: 267 cgcgcccctcgcctcctactccccctacaacgggt 301 ||||||||||||| ||||||||| |||| |||||| Sbjct: 193 cgcgcccctcgccgcctactcccactacgacgggt 227 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 184 bits (93), Expect = 6e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 141 gctgcagaccaccgtcgaggccctcaaggagaagctctggaggaagaccggcaccgccgt 200 |||||||||| |||||||||| |||||||| ||||||||||||||||||||||| |||| Sbjct: 35461704 gctgcagacctccgtcgaggcgctcaaggacaagctctggaggaagaccggcacatccgt 35461645 Query: 201 cgcctccatgcgcctcgacctccgcgacgataccggcgccaagatcgccgacctcgacca 260 |||| |||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 35461644 tgccttcatgcgcctccagctccgcgacgacaccggcgccatgatcgccgacctcgacca 35461585 Query: 261 cgacgccgcgcccctcgcctcctactccccctacaacgggt 301 ||| | ||| ||||||||||||||||||| ||| |||||| Sbjct: 35461584 cgatgacgccaccctcgcctcctactccccatacgacgggt 35461544 Score = 176 bits (89), Expect = 1e-40 Identities = 125/137 (91%) Strand = Plus / Minus Query: 810 aggtgggagatagatgtgaagttgagccaggtgccaagaggggcactgtaaaatttgttg 869 ||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||| Sbjct: 35459761 aggtgggtgatagatgtgaagtcgagccaggtgctaagaggggtactgtaaaatttgttg 35459702 Query: 870 gcagagccgaagcccttggacgtggatttttggttggagtgcaatacgatgagccactgg 929 ||||||| ||||| |||||||||||||||| ||||||||| ||||| ||||| ||||| | Sbjct: 35459701 gcagagctgaagctcttggacgtggattttgggttggagtccaatatgatgaaccacttg 35459642 Query: 930 gaaagcacgatggcatg 946 ||||||| ||||||||| Sbjct: 35459641 gaaagcatgatggcatg 35459625 Score = 153 bits (77), Expect = 2e-33 Identities = 98/105 (93%) Strand = Plus / Minus Query: 36 aatgtcgtcgtcgtcgtccaagctgcagctgccggcggacgacagcgtcctcctgctcgt 95 |||||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| | Sbjct: 35461872 aatgtcgtcgtcctcgtccaagctgcatctcccggctgacgacagcgtcctcctcctcct 35461813 Query: 96 cacgcactccaacctcaccaccttctcctccgacatccgcgtctc 140 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 35461812 cacgcactccaacctctccaccttctcctccgacatccgcgtctc 35461768 Score = 103 bits (52), Expect = 2e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 946 ggtgaaaggtattcgcttcttcgagtgccctcaagggcatggagcaattgttaggccagg 1005 ||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 35458988 ggtgaaaggcattcgctttttcgagtgtcctcaagggcatggagctattgttaggccaga 35458929 Query: 1006 gaaagtaaaggt 1017 |||||||||||| Sbjct: 35458928 gaaagtaaaggt 35458917 Score = 103 bits (52), Expect = 2e-18 Identities = 91/104 (87%) Strand = Plus / Minus Query: 587 aggtaccggctgcatattattgatcttgatccttcgtcggtgacctctggtggttggttg 646 |||||||| ||||| ||||| ||||| ||||||||||| | |||||||||||||||||| Sbjct: 35461473 aggtaccgtctgcacattatcgatctcgatccttcgtcaatcacctctggtggttggttg 35461414 Query: 647 gaagatacttcacttgtcgacaagtacacgatttcagatgaagc 690 || |||||||| ||||| || |||||||| || ||||||||||| Sbjct: 35461413 gaggatacttcccttgttgaaaagtacaccatctcagatgaagc 35461370 >emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 184 bits (93), Expect = 6e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 141 gctgcagaccaccgtcgaggccctcaaggagaagctctggaggaagaccggcaccgccgt 200 |||||||||| |||||||||| |||||||| ||||||||||||||||||||||| |||| Sbjct: 86507 gctgcagacctccgtcgaggcgctcaaggacaagctctggaggaagaccggcacatccgt 86448 Query: 201 cgcctccatgcgcctcgacctccgcgacgataccggcgccaagatcgccgacctcgacca 260 |||| |||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 86447 tgccttcatgcgcctccagctccgcgacgacaccggcgccatgatcgccgacctcgacca 86388 Query: 261 cgacgccgcgcccctcgcctcctactccccctacaacgggt 301 ||| | ||| ||||||||||||||||||| ||| |||||| Sbjct: 86387 cgatgacgccaccctcgcctcctactccccatacgacgggt 86347 Score = 176 bits (89), Expect = 1e-40 Identities = 125/137 (91%) Strand = Plus / Minus Query: 810 aggtgggagatagatgtgaagttgagccaggtgccaagaggggcactgtaaaatttgttg 869 ||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||| Sbjct: 84564 aggtgggtgatagatgtgaagtcgagccaggtgctaagaggggtactgtaaaatttgttg 84505 Query: 870 gcagagccgaagcccttggacgtggatttttggttggagtgcaatacgatgagccactgg 929 ||||||| ||||| |||||||||||||||| ||||||||| ||||| ||||| ||||| | Sbjct: 84504 gcagagctgaagctcttggacgtggattttgggttggagtccaatatgatgaaccacttg 84445 Query: 930 gaaagcacgatggcatg 946 ||||||| ||||||||| Sbjct: 84444 gaaagcatgatggcatg 84428 Score = 153 bits (77), Expect = 2e-33 Identities = 98/105 (93%) Strand = Plus / Minus Query: 36 aatgtcgtcgtcgtcgtccaagctgcagctgccggcggacgacagcgtcctcctgctcgt 95 |||||||||||| |||||||||||||| || ||||| ||||||||||||||||| ||| | Sbjct: 86675 aatgtcgtcgtcctcgtccaagctgcatctcccggctgacgacagcgtcctcctcctcct 86616 Query: 96 cacgcactccaacctcaccaccttctcctccgacatccgcgtctc 140 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 86615 cacgcactccaacctctccaccttctcctccgacatccgcgtctc 86571 Score = 103 bits (52), Expect = 2e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 946 ggtgaaaggtattcgcttcttcgagtgccctcaagggcatggagcaattgttaggccagg 1005 ||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||| Sbjct: 83791 ggtgaaaggcattcgctttttcgagtgtcctcaagggcatggagctattgttaggccaga 83732 Query: 1006 gaaagtaaaggt 1017 |||||||||||| Sbjct: 83731 gaaagtaaaggt 83720 Score = 103 bits (52), Expect = 2e-18 Identities = 91/104 (87%) Strand = Plus / Minus Query: 587 aggtaccggctgcatattattgatcttgatccttcgtcggtgacctctggtggttggttg 646 |||||||| ||||| ||||| ||||| ||||||||||| | |||||||||||||||||| Sbjct: 86276 aggtaccgtctgcacattatcgatctcgatccttcgtcaatcacctctggtggttggttg 86217 Query: 647 gaagatacttcacttgtcgacaagtacacgatttcagatgaagc 690 || |||||||| ||||| || |||||||| || ||||||||||| Sbjct: 86216 gaggatacttcccttgttgaaaagtacaccatctcagatgaagc 86173