BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018l16 (940 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056163.1| Oryza sativa (japonica cultivar-group) Os03g... 793 0.0 dbj|AK059989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 793 0.0 gb|EF190327.1| Triticum aestivum translation initiation factor n... 771 0.0 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 228 3e-56 gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 228 3e-56 >ref|NM_001056163.1| Oryza sativa (japonica cultivar-group) Os03g0262400 (Os03g0262400) mRNA, complete cds Length = 923 Score = 793 bits (400), Expect = 0.0 Identities = 562/616 (91%) Strand = Plus / Plus Query: 208 ccgccgaggaggacgaggcggaggccgaggagaacgagcgccgcaaccgcgagctcaagg 267 ||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 161 ccgccgacgacgacgaggctgaggcggaggagaacgagcgccgcaaccgcgagctcaagg 220 Query: 268 ccggcctccacccccttaggcgcaagttcgtgctctggtacacacgccgaacgcctggga 327 ||||| |||| ||||||||||| | |||||||| |||||||| ||||| || |||||| Sbjct: 221 ccggcttccatccccttaggcgtagattcgtgctatggtacacgcgccggactcctgggg 280 Query: 328 cgaggtcgcagtcgtacgaggacaacatcaggaagatcgttgacttcagcaccgttgagt 387 ||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||| Sbjct: 281 cgaggtcgcagtcctacgaggacaacatcaagaagatcgtcgacttcagcactgttgagt 340 Query: 388 cgttctgggtttgctactgccacctctcgcgcccgtcttccctgccgagccccactgacc 447 |||||||||||||||||||||||||| |||| ||| | ||||||||||||||| |||| Sbjct: 341 cgttctgggtttgctactgccacctcacgcggccggttagcctgccgagccccaccgacc 400 Query: 448 tgcatcttttcaaggagggcatccgccccctttgggaggatcctgcaaatcggaatggtg 507 ||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| |||| Sbjct: 401 tgcatcttttcaaggagggcatccggcccctctgggaggatcccgcaaataggagcggtg 460 Query: 508 gcaagtggatcatacatttcaagaagtccgtttctggtcgtttctgggaggatttggtgc 567 |||||||||||||| || |||||| |||| ||||||||||||||||||||||||||| Sbjct: 461 gcaagtggatcataaggtttaagaagaccgtctctggtcgtttctgggaggatttggtgt 520 Query: 568 tggtgctagtgggtgatcaacttgattatagtgatgatgtttgtggtgtggtgctcagtg 627 |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 521 tggtgctagtgggtgatcaacttgattatagtgatgatgtttgtggcgttgtactcagtg 580 Query: 628 ttcgttttaatgaagacattctaagtgtttggaatcgaaatgcatcagaccaccaggctg 687 ||||||| ||||| |||||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 581 ttcgtttcaatgaggacattctaagtgtctggaaccgtaatgcatctgaccaccaggctg 640 Query: 688 tgatgacattaagagattcaattaagaggcatctcaagctgccacacagctatttgatgg 747 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 641 tgatgacattaagagattcaattaagaggcatctgaagctgccacacagctatctgatgg 700 Query: 748 agtacaaaccacatgatgcttcgctgcgagataactcatcgtacaggaacacatggttga 807 |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 701 agtacaaaccacatgatgcttcactgcgggataactcatcttacaggaacacgtggttga 760 Query: 808 gaggataaactccatg 823 |||||||| ||||||| Sbjct: 761 gaggataagctccatg 776 Score = 99.6 bits (50), Expect = 2e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 98 aatcgccgtagtagggcgcgccatggagccggcggcggagagggaggaggccgagcagga 157 |||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 63 aatcgccgcagcagggcgcgccatggagccggcggcggagaagagggaggccgagcagga 122 Query: 158 ggagcagcagcagc 171 ||||| |||||||| Sbjct: 123 ggagctgcagcagc 136 >dbj|AK059989.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A08, full insert sequence Length = 923 Score = 793 bits (400), Expect = 0.0 Identities = 562/616 (91%) Strand = Plus / Plus Query: 208 ccgccgaggaggacgaggcggaggccgaggagaacgagcgccgcaaccgcgagctcaagg 267 ||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 161 ccgccgacgacgacgaggctgaggcggaggagaacgagcgccgcaaccgcgagctcaagg 220 Query: 268 ccggcctccacccccttaggcgcaagttcgtgctctggtacacacgccgaacgcctggga 327 ||||| |||| ||||||||||| | |||||||| |||||||| ||||| || |||||| Sbjct: 221 ccggcttccatccccttaggcgtagattcgtgctatggtacacgcgccggactcctgggg 280 Query: 328 cgaggtcgcagtcgtacgaggacaacatcaggaagatcgttgacttcagcaccgttgagt 387 ||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||| Sbjct: 281 cgaggtcgcagtcctacgaggacaacatcaagaagatcgtcgacttcagcactgttgagt 340 Query: 388 cgttctgggtttgctactgccacctctcgcgcccgtcttccctgccgagccccactgacc 447 |||||||||||||||||||||||||| |||| ||| | ||||||||||||||| |||| Sbjct: 341 cgttctgggtttgctactgccacctcacgcggccggttagcctgccgagccccaccgacc 400 Query: 448 tgcatcttttcaaggagggcatccgccccctttgggaggatcctgcaaatcggaatggtg 507 ||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| |||| Sbjct: 401 tgcatcttttcaaggagggcatccggcccctctgggaggatcccgcaaataggagcggtg 460 Query: 508 gcaagtggatcatacatttcaagaagtccgtttctggtcgtttctgggaggatttggtgc 567 |||||||||||||| || |||||| |||| ||||||||||||||||||||||||||| Sbjct: 461 gcaagtggatcataaggtttaagaagaccgtctctggtcgtttctgggaggatttggtgt 520 Query: 568 tggtgctagtgggtgatcaacttgattatagtgatgatgtttgtggtgtggtgctcagtg 627 |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| Sbjct: 521 tggtgctagtgggtgatcaacttgattatagtgatgatgtttgtggcgttgtactcagtg 580 Query: 628 ttcgttttaatgaagacattctaagtgtttggaatcgaaatgcatcagaccaccaggctg 687 ||||||| ||||| |||||||||||||| ||||| || |||||||| ||||||||||||| Sbjct: 581 ttcgtttcaatgaggacattctaagtgtctggaaccgtaatgcatctgaccaccaggctg 640 Query: 688 tgatgacattaagagattcaattaagaggcatctcaagctgccacacagctatttgatgg 747 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 641 tgatgacattaagagattcaattaagaggcatctgaagctgccacacagctatctgatgg 700 Query: 748 agtacaaaccacatgatgcttcgctgcgagataactcatcgtacaggaacacatggttga 807 |||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 701 agtacaaaccacatgatgcttcactgcgggataactcatcttacaggaacacgtggttga 760 Query: 808 gaggataaactccatg 823 |||||||| ||||||| Sbjct: 761 gaggataagctccatg 776 Score = 99.6 bits (50), Expect = 2e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 98 aatcgccgtagtagggcgcgccatggagccggcggcggagagggaggaggccgagcagga 157 |||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 63 aatcgccgcagcagggcgcgccatggagccggcggcggagaagagggaggccgagcagga 122 Query: 158 ggagcagcagcagc 171 ||||| |||||||| Sbjct: 123 ggagctgcagcagc 136 >gb|EF190327.1| Triticum aestivum translation initiation factor nCBP mRNA, complete cds Length = 702 Score = 771 bits (389), Expect = 0.0 Identities = 619/695 (89%), Gaps = 3/695 (0%) Strand = Plus / Plus Query: 120 atggagccggcggcggagagggaggaggccgagcaggaggagcagcagcagccatcgcac 179 ||||||||||||| ||||||| ||| | |||||||||||||||||| |||||| |||||| Sbjct: 1 atggagccggcggtggagaggaaggtgcccgagcaggaggagcagctgcagccgtcgcac 60 Query: 180 gtgcggagcgacgacg---cgcccgccgccaccgccgaggaggacgaggcggaggccgag 236 | ||| ||| |||| ||||||||||| || |||||||||||||||||||| ||| Sbjct: 61 gcccgggccgaggacgcgccgcccgccgccgtcgaggaggaggacgaggcggaggcggag 120 Query: 237 gagaacgagcgccgcaaccgcgagctcaaggccggcctccacccccttaggcgcaagttc 296 || | |||||||||||||||||||||||||||||||||||| ||||| ||||||||| || Sbjct: 121 gaaagcgagcgccgcaaccgcgagctcaaggccggcctccatcccctcaggcgcaagctc 180 Query: 297 gtgctctggtacacacgccgaacgcctgggacgaggtcgcagtcgtacgaggacaacatc 356 |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 181 gtgctctggtacacgcgccggacgcccgggacgaggtcgcagtcgtacgaggacaacatc 240 Query: 357 aggaagatcgttgacttcagcaccgttgagtcgttctgggtttgctactgccacctctcg 416 | ||||||||| || |||||||| || |||||||||||||||||||||||||||||| | Sbjct: 241 aagaagatcgtcgatttcagcactgtcgagtcgttctgggtttgctactgccacctcgca 300 Query: 417 cgcccgtcttccctgccgagccccactgacctgcatcttttcaaggagggcatccgcccc 476 |||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||| || Sbjct: 301 cgcccgtcttccctcccgagccccacggacctgcatcttttcaaagagggtgtccgtcca 360 Query: 477 ctttgggaggatcctgcaaatcggaatggtggcaagtggatcatacatttcaagaagtcc 536 || |||||||||||||||||||||||||||||||||||||| |||| ||||||||| | Sbjct: 361 ctctgggaggatcctgcaaatcggaatggtggcaagtggattatacggttcaagaaggct 420 Query: 537 gtttctggtcgtttctgggaggatttggtgctggtgctagtgggtgatcaacttgattat 596 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 421 gtttctgggcgtttctgggaggatttggtgctggttctagtgggtgatcaacttgattat 480 Query: 597 agtgatgatgtttgtggtgtggtgctcagtgttcgttttaatgaagacattctaagtgtt 656 ||||||||||||||||| | ||||| ||| |||||| ||||||||||| || || || Sbjct: 481 agtgatgatgtttgtggcatcgtgctaagttgtcgtttcaatgaagacatcctgagcgtc 540 Query: 657 tggaatcgaaatgcatcagaccaccaggctgtgatgacattaagagattcaattaagagg 716 |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 541 tggaatcggaatgcatcagaccaccaggctgtgatgacattaagagactcgattaagagg 600 Query: 717 catctcaagctgccacacagctatttgatggagtacaaaccacatgatgcttcgctgcga 776 || | |||||||| |||| |||| ||||||||||||| |||||||| || ||||||||| Sbjct: 601 cacttgaagctgccgcacacctatctgatggagtacaagccacatgacgcctcgctgcga 660 Query: 777 gataactcatcgtacaggaacacatggttgagagg 811 || ||||| || ||||||||||||||| ||||||| Sbjct: 661 gacaactcgtcctacaggaacacatggctgagagg 695 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 228 bits (115), Expect = 3e-56 Identities = 136/143 (95%) Strand = Plus / Minus Query: 681 caggctgtgatgacattaagagattcaattaagaggcatctcaagctgccacacagctat 740 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 8567570 caggctgtgatgacattaagagattcaattaagaggcatctgaagctgccacacagctat 8567511 Query: 741 ttgatggagtacaaaccacatgatgcttcgctgcgagataactcatcgtacaggaacaca 800 |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 8567510 ctgatggagtacaaaccacatgatgcttcactgcgggataactcatcttacaggaacacg 8567451 Query: 801 tggttgagaggataaactccatg 823 ||||||||||||||| ||||||| Sbjct: 8567450 tggttgagaggataagctccatg 8567428 Score = 163 bits (82), Expect = 2e-36 Identities = 112/122 (91%) Strand = Plus / Minus Query: 563 ggtgctggtgctagtgggtgatcaacttgattatagtgatgatgtttgtggtgtggtgct 622 |||| |||||||||||||||||||||||||||||||||||||||||||||| || || || Sbjct: 8567769 ggtgttggtgctagtgggtgatcaacttgattatagtgatgatgtttgtggcgttgtact 8567710 Query: 623 cagtgttcgttttaatgaagacattctaagtgtttggaatcgaaatgcatcagaccacca 682 |||||||||||| ||||| |||||||||||||| ||||| || |||||||| |||||||| Sbjct: 8567709 cagtgttcgtttcaatgaggacattctaagtgtctggaaccgtaatgcatctgaccacca 8567650 Query: 683 gg 684 || Sbjct: 8567649 gg 8567648 Score = 139 bits (70), Expect = 2e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 381 gttgagtcgttctgggtttgctactgccacctctcgcgcccgtcttccctgccgagcccc 440 ||||||||||||||||||||||||||||||||| |||| ||| | ||||||||||||| Sbjct: 8570122 gttgagtcgttctgggtttgctactgccacctcacgcggccggttagcctgccgagcccc 8570063 Query: 441 actgacctgcatcttttcaaggagggcatccgccccctttgggagg 486 || ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 8570062 accgacctgcatcttttcaaggagggcatccggcccctctgggagg 8570017 Score = 111 bits (56), Expect = 5e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 208 ccgccgaggaggacgaggcggaggccgaggagaacgagcgccgcaaccgcgagctcaagg 267 ||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 8570543 ccgccgacgacgacgaggctgaggcggaggagaacgagcgccgcaaccgcgagctcaagg 8570484 Query: 268 ccggcctccacccccttagg 287 ||||| |||| ||||||||| Sbjct: 8570483 ccggcttccatccccttagg 8570464 Score = 107 bits (54), Expect = 8e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 294 ttcgtgctctggtacacacgccgaacgcctgggacgaggtcgcagtcgtacgaggacaac 353 |||||||| |||||||| ||||| || |||||| ||||||||||||| |||||||||||| Sbjct: 8570300 ttcgtgctatggtacacgcgccggactcctggggcgaggtcgcagtcctacgaggacaac 8570241 Query: 354 atcaggaagatcgttgacttcagcac 379 |||| ||||||||| ||||||||||| Sbjct: 8570240 atcaagaagatcgtcgacttcagcac 8570215 Score = 99.6 bits (50), Expect = 2e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 98 aatcgccgtagtagggcgcgccatggagccggcggcggagagggaggaggccgagcagga 157 |||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 8570641 aatcgccgcagcagggcgcgccatggagccggcggcggagaagagggaggccgagcagga 8570582 Query: 158 ggagcagcagcagc 171 ||||| |||||||| Sbjct: 8570581 ggagctgcagcagc 8570568 Score = 83.8 bits (42), Expect = 1e-12 Identities = 72/82 (87%) Strand = Plus / Minus Query: 484 aggatcctgcaaatcggaatggtggcaagtggatcatacatttcaagaagtccgtttctg 543 ||||||| |||||| ||| |||||||||||||||||| || |||||| |||| |||| Sbjct: 8569916 aggatcccgcaaataggagcggtggcaagtggatcataaggtttaagaagaccgtctctg 8569857 Query: 544 gtcgtttctgggaggatttggt 565 |||||||||||||||||||||| Sbjct: 8569856 gtcgtttctgggaggatttggt 8569835 >gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 228 bits (115), Expect = 3e-56 Identities = 136/143 (95%) Strand = Plus / Minus Query: 681 caggctgtgatgacattaagagattcaattaagaggcatctcaagctgccacacagctat 740 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 50707 caggctgtgatgacattaagagattcaattaagaggcatctgaagctgccacacagctat 50648 Query: 741 ttgatggagtacaaaccacatgatgcttcgctgcgagataactcatcgtacaggaacaca 800 |||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 50647 ctgatggagtacaaaccacatgatgcttcactgcgggataactcatcttacaggaacacg 50588 Query: 801 tggttgagaggataaactccatg 823 ||||||||||||||| ||||||| Sbjct: 50587 tggttgagaggataagctccatg 50565 Score = 163 bits (82), Expect = 2e-36 Identities = 112/122 (91%) Strand = Plus / Minus Query: 563 ggtgctggtgctagtgggtgatcaacttgattatagtgatgatgtttgtggtgtggtgct 622 |||| |||||||||||||||||||||||||||||||||||||||||||||| || || || Sbjct: 50906 ggtgttggtgctagtgggtgatcaacttgattatagtgatgatgtttgtggcgttgtact 50847 Query: 623 cagtgttcgttttaatgaagacattctaagtgtttggaatcgaaatgcatcagaccacca 682 |||||||||||| ||||| |||||||||||||| ||||| || |||||||| |||||||| Sbjct: 50846 cagtgttcgtttcaatgaggacattctaagtgtctggaaccgtaatgcatctgaccacca 50787 Query: 683 gg 684 || Sbjct: 50786 gg 50785 Score = 139 bits (70), Expect = 2e-29 Identities = 97/106 (91%) Strand = Plus / Minus Query: 381 gttgagtcgttctgggtttgctactgccacctctcgcgcccgtcttccctgccgagcccc 440 ||||||||||||||||||||||||||||||||| |||| ||| | ||||||||||||| Sbjct: 53259 gttgagtcgttctgggtttgctactgccacctcacgcggccggttagcctgccgagcccc 53200 Query: 441 actgacctgcatcttttcaaggagggcatccgccccctttgggagg 486 || ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 53199 accgacctgcatcttttcaaggagggcatccggcccctctgggagg 53154 Score = 111 bits (56), Expect = 5e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 208 ccgccgaggaggacgaggcggaggccgaggagaacgagcgccgcaaccgcgagctcaagg 267 ||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 53680 ccgccgacgacgacgaggctgaggcggaggagaacgagcgccgcaaccgcgagctcaagg 53621 Query: 268 ccggcctccacccccttagg 287 ||||| |||| ||||||||| Sbjct: 53620 ccggcttccatccccttagg 53601 Score = 107 bits (54), Expect = 8e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 294 ttcgtgctctggtacacacgccgaacgcctgggacgaggtcgcagtcgtacgaggacaac 353 |||||||| |||||||| ||||| || |||||| ||||||||||||| |||||||||||| Sbjct: 53437 ttcgtgctatggtacacgcgccggactcctggggcgaggtcgcagtcctacgaggacaac 53378 Query: 354 atcaggaagatcgttgacttcagcac 379 |||| ||||||||| ||||||||||| Sbjct: 53377 atcaagaagatcgtcgacttcagcac 53352 Score = 99.6 bits (50), Expect = 2e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 98 aatcgccgtagtagggcgcgccatggagccggcggcggagagggaggaggccgagcagga 157 |||||||| || ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 53778 aatcgccgcagcagggcgcgccatggagccggcggcggagaagagggaggccgagcagga 53719 Query: 158 ggagcagcagcagc 171 ||||| |||||||| Sbjct: 53718 ggagctgcagcagc 53705 Score = 83.8 bits (42), Expect = 1e-12 Identities = 72/82 (87%) Strand = Plus / Minus Query: 484 aggatcctgcaaatcggaatggtggcaagtggatcatacatttcaagaagtccgtttctg 543 ||||||| |||||| ||| |||||||||||||||||| || |||||| |||| |||| Sbjct: 53053 aggatcccgcaaataggagcggtggcaagtggatcataaggtttaagaagaccgtctctg 52994 Query: 544 gtcgtttctgggaggatttggt 565 |||||||||||||||||||||| Sbjct: 52993 gtcgtttctgggaggatttggt 52972