BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst018k16 (1325 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT832350.1| Oryza sativa (indica cultivar-group) cDNA clone:... 553 e-154 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 545 e-151 dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic D... 545 e-151 dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic D... 545 e-151 ref|NM_001049704.1| Oryza sativa (japonica cultivar-group) Os01g... 456 e-124 >emb|CT832350.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN025N11, full insert sequence Length = 1430 Score = 553 bits (279), Expect = e-154 Identities = 437/490 (89%), Gaps = 6/490 (1%) Strand = Plus / Plus Query: 139 cgaagatgcggatgagctgcaacgggtgccgggtgctgcgcaaggggtgcagcgaggggt 198 |||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 159 cgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggt 218 Query: 199 gcaccatccggccgtgcctgcagtggatcgagaccccccaggcgcaggccaacgccaccg 258 |||||||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| Sbjct: 219 gcaccatccgtccgtgcctgcagtggatcaagactcccgaggcgcaggccaacgccaccg 278 Query: 259 tcttcctcgccaagttctacggccgcgccgggctcctcaacctcctcgccgggggcaccg 318 |||||||||||||||||||||||||||||||||| |||||||| ||||||| || | | Sbjct: 279 tcttcctcgccaagttctacggccgcgccgggcttctcaacctgctcgccgccgggcctg 338 Query: 319 atcacctccgcccggccgtcttccgctcgctgctctacgaggcctgcggccggatcgtca 378 | ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 339 accacctccgccccgccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtca 398 Query: 379 acccgatctacggctcggtcgggctgctctggtcgggccagtggcaggcgtgccaggccg 438 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 399 acccgatctacggctccgtcggcctgctctggtcgggccagtggcaggcgtgccaggccg 458 Query: 439 ctgtcgaggccgtgctcaaggggaaccgcatcgtgcaggtctcgtccgaggccgtggctg 498 | ||||||||||| |||||||| ||| | ||||||||||||| || ||||||| || | Sbjct: 459 ccgtcgaggccgtcctcaagggcgaccccgtcgtgcaggtctcctctgaggccgccgccg 518 Query: 499 ccgcgcaggcgaccccgccgctcagggcgtacgacatccgtcatgtcgccggcgccaagg 558 |||| ||||| ||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 519 ccgcccaggccaccccgccgctcagggcctacgacatccgcca------cgtcgccaagg 572 Query: 559 accccgacgccggcgccgcagccgacctgctccacgtagcgcgcgccggacgcacccgtt 618 || |||| |||| |||||| ||| ||||||||| ||| ||||||| ||| |||||||| | Sbjct: 573 acgccgaggccgacgccgccgccaacctgctccgcgtcgcgcgcggcggccgcacccgct 632 Query: 619 tcaagcgcgc 628 |||||||||| Sbjct: 633 tcaagcgcgc 642 Score = 143 bits (72), Expect = 2e-30 Identities = 206/248 (83%), Gaps = 12/248 (4%) Strand = Plus / Plus Query: 840 tcggaggacaccgaggtggaggcgggctcccacgtgagccaggccgagcagcagagccct 899 |||||||| |||||||| ||| | ||||| ||||||||||||||||||||| ||||| Sbjct: 923 tcggaggataccgaggtcgagaccggctcacacgtgagccaggccgagcag---agcccc 979 Query: 900 gtgccggtggccgaggaggacgaggaaggggaagatgaggttgggctggagctgacgctt 959 |||||||||| || | || |||| | ||| || ||||| ||||||||||| ||||| Sbjct: 980 gtgccggtgg---agcacgaagagggggaggaggaggaggtcgggctggagctcacgctc 1036 Query: 960 gggttcgagccg---gtcgcgcgcgtctcgaggacgccgaggccgtcggcggaggcgcgc 1016 |||||| ||||| |||| ||||| |||||||| ||| ||||||||||||||||| Sbjct: 1037 gggttccagccgctcgtcgtgcgcgcctcgaggaggcctt---cgtcggcggaggcgcgc 1093 Query: 1017 tgcgacctgagcagcttgagcgcagagtcgagccacatcggcctgcggcttgagctgccg 1076 |||||||| ||| |||||||||| |||||||| | ||||||||||||||| |||||||| Sbjct: 1094 tgcgaccttagcggcttgagcgcggagtcgagtcgcatcggcctgcggctcgagctgcca 1153 Query: 1077 gcgtgaga 1084 |||||||| Sbjct: 1154 gcgtgaga 1161 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 545 bits (275), Expect = e-151 Identities = 436/490 (88%), Gaps = 6/490 (1%) Strand = Plus / Minus Query: 139 cgaagatgcggatgagctgcaacgggtgccgggtgctgcgcaaggggtgcagcgaggggt 198 |||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 17973273 cgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggt 17973214 Query: 199 gcaccatccggccgtgcctgcagtggatcgagaccccccaggcgcaggccaacgccaccg 258 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 17973213 gcaccatccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccaccg 17973154 Query: 259 tcttcctcgccaagttctacggccgcgccgggctcctcaacctcctcgccgggggcaccg 318 |||||||||||||||||||||||||||||||||| |||||||| ||||| | || | | Sbjct: 17973153 tcttcctcgccaagttctacggccgcgccgggcttctcaacctgctcgctgccgggcctg 17973094 Query: 319 atcacctccgcccggccgtcttccgctcgctgctctacgaggcctgcggccggatcgtca 378 | ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 17973093 accacctccgccccgccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtca 17973034 Query: 379 acccgatctacggctcggtcgggctgctctggtcgggccagtggcaggcgtgccaggccg 438 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 17973033 acccgatctacggctccgtcggcctgctctggtcgggccagtggcaggcgtgccaggccg 17972974 Query: 439 ctgtcgaggccgtgctcaaggggaaccgcatcgtgcaggtctcgtccgaggccgtggctg 498 | ||||||||||| |||||||| ||| | ||||||||||||| || ||||||| || | Sbjct: 17972973 ccgtcgaggccgtcctcaagggcgaccccgtcgtgcaggtctcctctgaggccgccgccg 17972914 Query: 499 ccgcgcaggcgaccccgccgctcagggcgtacgacatccgtcatgtcgccggcgccaagg 558 |||| ||||| ||||||||||||||||| ||||||||||| || || | |||||| Sbjct: 17972913 ccgcccaggccaccccgccgctcagggcctacgacatccgcca------cgtctccaagg 17972860 Query: 559 accccgacgccggcgccgcagccgacctgctccacgtagcgcgcgccggacgcacccgtt 618 || |||| |||| |||||| ||| ||||||||| ||| ||||||| ||| |||||||| | Sbjct: 17972859 acgccgaggccgacgccgccgccaacctgctccgcgtcgcgcgcggcggccgcacccgct 17972800 Query: 619 tcaagcgcgc 628 |||||||||| Sbjct: 17972799 tcaagcgcgc 17972790 Score = 180 bits (91), Expect = 1e-41 Identities = 142/159 (89%) Strand = Plus / Plus Query: 144 atgcggatgagctgcaacgggtgccgggtgctgcgcaaggggtgcagcgaggggtgcacc 203 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 1656376 atgcggatgagctgcaacgggtgccgcgtgctgcgcaaggggtgcagcgacaactgcgcc 1656435 Query: 204 atccggccgtgcctgcagtggatcgagaccccccaggcgcaggccaacgccaccgtcttc 263 ||||| || |||||||||||||| | |||| | |||||||||||||||||||||||| Sbjct: 1656436 atccgcccctgcctgcagtggattcgcagccccgatgcgcaggccaacgccaccgtcttc 1656495 Query: 264 ctcgccaagttctacggccgcgccgggctcctcaacctc 302 |||||||||||||||||||||||||| ||| |||||||| Sbjct: 1656496 ctcgccaagttctacggccgcgccggcctcatcaacctc 1656534 Score = 143 bits (72), Expect = 2e-30 Identities = 206/248 (83%), Gaps = 12/248 (4%) Strand = Plus / Minus Query: 840 tcggaggacaccgaggtggaggcgggctcccacgtgagccaggccgagcagcagagccct 899 |||||||| |||||||| ||| | ||||| ||||||||||||||||||||| ||||| Sbjct: 17972512 tcggaggataccgaggtcgagaccggctcacacgtgagccaggccgagcag---agcccc 17972456 Query: 900 gtgccggtggccgaggaggacgaggaaggggaagatgaggttgggctggagctgacgctt 959 |||||||||| || | || |||| | ||| || ||||| ||||||||||| ||||| Sbjct: 17972455 gtgccggtgg---agcacgaagagggggaggaggaggaggtcgggctggagctcacgctc 17972399 Query: 960 gggttcgagccg---gtcgcgcgcgtctcgaggacgccgaggccgtcggcggaggcgcgc 1016 |||||| ||||| |||| ||||| |||||||| ||| ||||||||||||||||| Sbjct: 17972398 gggttccagccgctcgtcgtgcgcgcctcgaggaggcctt---cgtcggcggaggcgcgc 17972342 Query: 1017 tgcgacctgagcagcttgagcgcagagtcgagccacatcggcctgcggcttgagctgccg 1076 |||||||| ||| |||||||||| |||||||| | ||||||||||||||| |||||||| Sbjct: 17972341 tgcgaccttagcggcttgagcgcggagtcgagtcgcatcggcctgcggctcgagctgcca 17972282 Query: 1077 gcgtgaga 1084 |||||||| Sbjct: 17972281 gcgtgaga 17972274 >dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 545 bits (275), Expect = e-151 Identities = 436/490 (88%), Gaps = 6/490 (1%) Strand = Plus / Minus Query: 139 cgaagatgcggatgagctgcaacgggtgccgggtgctgcgcaaggggtgcagcgaggggt 198 |||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 514 cgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggt 455 Query: 199 gcaccatccggccgtgcctgcagtggatcgagaccccccaggcgcaggccaacgccaccg 258 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 454 gcaccatccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccaccg 395 Query: 259 tcttcctcgccaagttctacggccgcgccgggctcctcaacctcctcgccgggggcaccg 318 |||||||||||||||||||||||||||||||||| |||||||| ||||| | || | | Sbjct: 394 tcttcctcgccaagttctacggccgcgccgggcttctcaacctgctcgctgccgggcctg 335 Query: 319 atcacctccgcccggccgtcttccgctcgctgctctacgaggcctgcggccggatcgtca 378 | ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 334 accacctccgccccgccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtca 275 Query: 379 acccgatctacggctcggtcgggctgctctggtcgggccagtggcaggcgtgccaggccg 438 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 274 acccgatctacggctccgtcggcctgctctggtcgggccagtggcaggcgtgccaggccg 215 Query: 439 ctgtcgaggccgtgctcaaggggaaccgcatcgtgcaggtctcgtccgaggccgtggctg 498 | ||||||||||| |||||||| ||| | ||||||||||||| || ||||||| || | Sbjct: 214 ccgtcgaggccgtcctcaagggcgaccccgtcgtgcaggtctcctctgaggccgccgccg 155 Query: 499 ccgcgcaggcgaccccgccgctcagggcgtacgacatccgtcatgtcgccggcgccaagg 558 |||| ||||| ||||||||||||||||| ||||||||||| || || | |||||| Sbjct: 154 ccgcccaggccaccccgccgctcagggcctacgacatccgcca------cgtctccaagg 101 Query: 559 accccgacgccggcgccgcagccgacctgctccacgtagcgcgcgccggacgcacccgtt 618 || |||| |||| |||||| ||| ||||||||| ||| ||||||| ||| |||||||| | Sbjct: 100 acgccgaggccgacgccgccgccaacctgctccgcgtcgcgcgcggcggccgcacccgct 41 Query: 619 tcaagcgcgc 628 |||||||||| Sbjct: 40 tcaagcgcgc 31 >dbj|AP003077.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0520B06 Length = 142667 Score = 545 bits (275), Expect = e-151 Identities = 436/490 (88%), Gaps = 6/490 (1%) Strand = Plus / Minus Query: 139 cgaagatgcggatgagctgcaacgggtgccgggtgctgcgcaaggggtgcagcgaggggt 198 |||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 93108 cgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggt 93049 Query: 199 gcaccatccggccgtgcctgcagtggatcgagaccccccaggcgcaggccaacgccaccg 258 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 93048 gcaccatccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccaccg 92989 Query: 259 tcttcctcgccaagttctacggccgcgccgggctcctcaacctcctcgccgggggcaccg 318 |||||||||||||||||||||||||||||||||| |||||||| ||||| | || | | Sbjct: 92988 tcttcctcgccaagttctacggccgcgccgggcttctcaacctgctcgctgccgggcctg 92929 Query: 319 atcacctccgcccggccgtcttccgctcgctgctctacgaggcctgcggccggatcgtca 378 | ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 92928 accacctccgccccgccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtca 92869 Query: 379 acccgatctacggctcggtcgggctgctctggtcgggccagtggcaggcgtgccaggccg 438 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 92868 acccgatctacggctccgtcggcctgctctggtcgggccagtggcaggcgtgccaggccg 92809 Query: 439 ctgtcgaggccgtgctcaaggggaaccgcatcgtgcaggtctcgtccgaggccgtggctg 498 | ||||||||||| |||||||| ||| | ||||||||||||| || ||||||| || | Sbjct: 92808 ccgtcgaggccgtcctcaagggcgaccccgtcgtgcaggtctcctctgaggccgccgccg 92749 Query: 499 ccgcgcaggcgaccccgccgctcagggcgtacgacatccgtcatgtcgccggcgccaagg 558 |||| ||||| ||||||||||||||||| ||||||||||| || || | |||||| Sbjct: 92748 ccgcccaggccaccccgccgctcagggcctacgacatccgcca------cgtctccaagg 92695 Query: 559 accccgacgccggcgccgcagccgacctgctccacgtagcgcgcgccggacgcacccgtt 618 || |||| |||| |||||| ||| ||||||||| ||| ||||||| ||| |||||||| | Sbjct: 92694 acgccgaggccgacgccgccgccaacctgctccgcgtcgcgcgcggcggccgcacccgct 92635 Query: 619 tcaagcgcgc 628 |||||||||| Sbjct: 92634 tcaagcgcgc 92625 Score = 143 bits (72), Expect = 2e-30 Identities = 206/248 (83%), Gaps = 12/248 (4%) Strand = Plus / Minus Query: 840 tcggaggacaccgaggtggaggcgggctcccacgtgagccaggccgagcagcagagccct 899 |||||||| |||||||| ||| | ||||| ||||||||||||||||||||| ||||| Sbjct: 92347 tcggaggataccgaggtcgagaccggctcacacgtgagccaggccgagcag---agcccc 92291 Query: 900 gtgccggtggccgaggaggacgaggaaggggaagatgaggttgggctggagctgacgctt 959 |||||||||| || | || |||| | ||| || ||||| ||||||||||| ||||| Sbjct: 92290 gtgccggtgg---agcacgaagagggggaggaggaggaggtcgggctggagctcacgctc 92234 Query: 960 gggttcgagccg---gtcgcgcgcgtctcgaggacgccgaggccgtcggcggaggcgcgc 1016 |||||| ||||| |||| ||||| |||||||| ||| ||||||||||||||||| Sbjct: 92233 gggttccagccgctcgtcgtgcgcgcctcgaggaggcctt---cgtcggcggaggcgcgc 92177 Query: 1017 tgcgacctgagcagcttgagcgcagagtcgagccacatcggcctgcggcttgagctgccg 1076 |||||||| ||| |||||||||| |||||||| | ||||||||||||||| |||||||| Sbjct: 92176 tgcgaccttagcggcttgagcgcggagtcgagtcgcatcggcctgcggctcgagctgcca 92117 Query: 1077 gcgtgaga 1084 |||||||| Sbjct: 92116 gcgtgaga 92109 >ref|NM_001049704.1| Oryza sativa (japonica cultivar-group) Os01g0511000 (Os01g0511000) mRNA, complete cds Length = 1415 Score = 456 bits (230), Expect = e-124 Identities = 299/322 (92%) Strand = Plus / Plus Query: 139 cgaagatgcggatgagctgcaacgggtgccgggtgctgcgcaaggggtgcagcgaggggt 198 |||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 164 cgaagatgcggatgagttgcaacggttgccgggtgctgcgcaagggatgcagcgaagggt 223 Query: 199 gcaccatccggccgtgcctgcagtggatcgagaccccccaggcgcaggccaacgccaccg 258 |||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 224 gcaccatccgtccgtgcctgcagtggatcaagacccccgaggcgcaggccaacgccaccg 283 Query: 259 tcttcctcgccaagttctacggccgcgccgggctcctcaacctcctcgccgggggcaccg 318 |||||||||||||||||||||||||||||||||| |||||||| ||||| | || | | Sbjct: 284 tcttcctcgccaagttctacggccgcgccgggcttctcaacctgctcgctgccgggcctg 343 Query: 319 atcacctccgcccggccgtcttccgctcgctgctctacgaggcctgcggccggatcgtca 378 | ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 344 accacctccgccccgccgtcttccgctcgctcctctacgaggcctgcggccgcatcgtca 403 Query: 379 acccgatctacggctcggtcgggctgctctggtcgggccagtggcaggcgtgccaggccg 438 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 404 acccgatctacggctccgtcggcctgctctggtcgggccagtggcaggcgtgccaggccg 463 Query: 439 ctgtcgaggccgtgctcaaggg 460 | ||||||||||| |||||||| Sbjct: 464 ccgtcgaggccgtcctcaaggg 485 Score = 143 bits (72), Expect = 2e-30 Identities = 206/248 (83%), Gaps = 12/248 (4%) Strand = Plus / Plus Query: 840 tcggaggacaccgaggtggaggcgggctcccacgtgagccaggccgagcagcagagccct 899 |||||||| |||||||| ||| | ||||| ||||||||||||||||||||| ||||| Sbjct: 878 tcggaggataccgaggtcgagaccggctcacacgtgagccaggccgagcag---agcccc 934 Query: 900 gtgccggtggccgaggaggacgaggaaggggaagatgaggttgggctggagctgacgctt 959 |||||||||| || | || |||| | ||| || ||||| ||||||||||| ||||| Sbjct: 935 gtgccggtgg---agcacgaagagggggaggaggaggaggtcgggctggagctcacgctc 991 Query: 960 gggttcgagccg---gtcgcgcgcgtctcgaggacgccgaggccgtcggcggaggcgcgc 1016 |||||| ||||| |||| ||||| |||||||| ||| ||||||||||||||||| Sbjct: 992 gggttccagccgctcgtcgtgcgcgcctcgaggaggcctt---cgtcggcggaggcgcgc 1048 Query: 1017 tgcgacctgagcagcttgagcgcagagtcgagccacatcggcctgcggcttgagctgccg 1076 |||||||| ||| |||||||||| |||||||| | ||||||||||||||| |||||||| Sbjct: 1049 tgcgaccttagcggcttgagcgcggagtcgagtcgcatcggcctgcggctcgagctgcca 1108 Query: 1077 gcgtgaga 1084 |||||||| Sbjct: 1109 gcgtgaga 1116